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FFCP PHASE1:Mm9::chr5:114439748..114439753,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:114439748..114439753,-
|DHSsupport=NA
|short_description=p2@Ssh1
|DPIdataset=NA
|description=CAGE_peak_2_at_Ssh1_5end
|association_with_transcript=0bp_to_ENSMUST00000077689,uc008yyx.1_5end
|EntrezGene=231637
|EntrezGene=231637
|HGNC=
|HGNC=
|MCL_coexpression_id=15
|TSSclassifier=NA
|UniProt=F8WHT2,Q76I79
|UniProt=F8WHT2,Q76I79
|association_with_transcript=0bp_to_ENSMUST00000077689,uc008yyx.1_5end
|cluster_id=chr5:114439748..114439753,-
|description=CAGE_peak_2_at_Ssh1_5end
|id=chr5:114439748..114439753,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,1.08e-07,6;CL:0000677,1.08e-07,6;CL:0000584,1.08e-07,6;CL:0000050,7.32e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004923!3.75e-11!24;UBERON:0000344!1.76e-07!15;UBERON:0005409!5.42e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0004923,3.57e-16,24;UBERON:0005409,4.78e-13,47;UBERON:0000344,2.21e-10,15;UBERON:0001007,2.72e-09,116;UBERON:0001555,2.72e-09,116;UBERON:0007026,2.72e-09,116;UBERON:0004119,6.06e-09,118;UBERON:0000925,6.06e-09,118;UBERON:0006595,6.06e-09,118;UBERON:0002106,1.11e-08,6;UBERON:0004457,1.11e-08,6;UBERON:0000042,1.11e-08,6;UBERON:0004854,1.11e-08,6;UBERON:0009034,1.11e-08,6;UBERON:0002095,1.11e-08,6;UBERON:0004782,1.11e-08,6;UBERON:0003281,1.11e-08,6;UBERON:0009664,1.11e-08,6;UBERON:0002296,1.11e-08,6;UBERON:0005602,1.11e-08,6;UBERON:0001179,1.11e-08,6;UBERON:0006293,1.11e-08,6;UBERON:0001242,2.50e-08,13;UBERON:0001262,2.50e-08,13;UBERON:0004786,2.50e-08,13;UBERON:0004921,3.80e-08,114;UBERON:0002107,5.55e-08,22;UBERON:0007499,5.55e-08,22;UBERON:0006925,5.55e-08,22;UBERON:0009497,5.55e-08,22;UBERON:0000015,5.55e-08,22;UBERON:0002423,5.55e-08,22;UBERON:0006235,5.55e-08,22;UBERON:0008835,5.55e-08,22;UBERON:0003894,5.55e-08,22;UBERON:0004161,5.55e-08,22;UBERON:0008836,5.55e-08,22;UBERON:0009854,1.75e-07,23;UBERON:0009856,1.75e-07,23;UBERON:0000945,2.00e-07,16;UBERON:0010039,2.00e-07,16;UBERON:0000160,5.56e-07,31
|phase1_expression=0,6.63053274514786,5.45999087267443,6.0492842261366,7.01254021924886,4.19698179779725,3.97141489012394,0,0,0,0,0,0,0,17.3217076144145,19.8425762042029,25.8837894907414,0,0.274228867211478,1.69755860719212,0,0,0,7.1996590257033,5.96464130774642,4.59385571292016,6.8921919385452,7.11055067863434,2.85035129184561,1.51218077855958,4.6563407237614,2.54012269383853,2.46025915033828,15.8481681015439,0,0.332469290716985,0.408338712524738,0.837063261473815,0,0,1.76469446409304,0.683045484958446,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0.514518872071894,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,9.56552812715537,0.860423876981386,15.6393406752783,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.91347103775248,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.452167921657868,0.352766121407114,0.125666591329675,3.46072954828123,0.289198713839823,8.84610551949874,2.10296904931632,8.61281921995535,11.6370060752453,0,0,0,6.64188343542338,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0.101839363850316,6.34475550111474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0,0,28.4160153366066,2.90895623329899,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,4.2707615539006,0,0,0.198956472041151,0.38992817423824,8.08937467788799,5.61958929674205,4.18196673834171,0,0.228497025219458,0,0,0,0.210407459670956,0,0,0,0,0,3.83743743147016,5.89676985339609,10.793381394473,18.6631311677423,11.0941493486112,13.4951701444152,10.3570609482292,11.0251954207024,5.76578967694971,1.43768206527355,2.60498663367952,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0.395287777946524,0,0.567760340833074,0.35613120733451,0.977321756121456,0.164970122972535,0,0.242780636154981,0,0,0.590603785761546,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0,0,0,0,0,0.582961673259701,0.556275906031529,18.1123133645724,1.23832120777933,5.37064129372164,51.2362203052759,37.864301078724,47.3570818537502,0,0.139951452323658,0.276399947608848,1.90934123603023,0,1.01659733563424,0.216010681643603,0,0,1.48350781023303,1.23980183588004,2.87931536182433,0,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0,0,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0.194915761479505,0,0.233753804363138,0.226730383615211,0,0,0.167884616364078,0,0,1.09890974560359,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,1.94485373654635,2.09613162627982,0.551530525350042,0.888986911206461,1.64828045791115,0.64183841918363,0.505394423527595,1.52087579934144,0.943131706930381,1.21733959710847,0.768301828858431,1.26358031702349,0.476293691283074,0.811190281613988,0.38581844092741,0,1.03039244094078,1.02860775715625,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.930760686808441,0.914639864363863,1.31534855718921,0.543216455383447,0.561142271657738,0.949080144993393,1.37906275325789,0.409231043169689,0.309873682371932,2.12197272079256,0,1.16965804222704,0.859484216193193,0,1.76473135295612,1.62307484934295
|phase1_expression=0,6.63053274514786,5.45999087267443,6.0492842261366,7.01254021924886,4.19698179779725,3.97141489012394,0,0,0,0,0,0,0,17.3217076144145,19.8425762042029,25.8837894907414,0,0.274228867211478,1.69755860719212,0,0,0,7.1996590257033,5.96464130774642,4.59385571292016,6.8921919385452,7.11055067863434,2.85035129184561,1.51218077855958,4.6563407237614,2.54012269383853,2.46025915033828,15.8481681015439,0,0.332469290716985,0.408338712524738,0.837063261473815,0,0,1.76469446409304,0.683045484958446,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0.514518872071894,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,9.56552812715537,0.860423876981386,15.6393406752783,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.91347103775248,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.452167921657868,0.352766121407114,0.125666591329675,3.46072954828123,0.289198713839823,8.84610551949874,2.10296904931632,8.61281921995535,11.6370060752453,0,0,0,6.64188343542338,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0.101839363850316,6.34475550111474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0,0,28.4160153366066,2.90895623329899,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,4.2707615539006,0,0,0.198956472041151,0.38992817423824,8.08937467788799,5.61958929674205,4.18196673834171,0,0.228497025219458,0,0,0,0.210407459670956,0,0,0,0,0,3.83743743147016,5.89676985339609,10.793381394473,18.6631311677423,11.0941493486112,13.4951701444152,10.3570609482292,11.0251954207024,5.76578967694971,1.43768206527355,2.60498663367952,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0.395287777946524,0,0.567760340833074,0.35613120733451,0.977321756121456,0.164970122972535,0,0.242780636154981,0,0,0.590603785761546,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0,0,0,0,0,0.582961673259701,0.556275906031529,18.1123133645724,1.23832120777933,5.37064129372164,51.2362203052759,37.864301078724,47.3570818537502,0,0.139951452323658,0.276399947608848,1.90934123603023,0,1.01659733563424,0.216010681643603,0,0,1.48350781023303,1.23980183588004,2.87931536182433,0,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0,0,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0.194915761479505,0,0.233753804363138,0.226730383615211,0,0,0.167884616364078,0,0,1.09890974560359,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,1.94485373654635,2.09613162627982,0.551530525350042,0.888986911206461,1.64828045791115,0.64183841918363,0.505394423527595,1.52087579934144,0.943131706930381,1.21733959710847,0.768301828858431,1.26358031702349,0.476293691283074,0.811190281613988,0.38581844092741,0,1.03039244094078,1.02860775715625,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.930760686808441,0.914639864363863,1.31534855718921,0.543216455383447,0.561142271657738,0.949080144993393,1.37906275325789,0.409231043169689,0.309873682371932,2.12197272079256,0,1.16965804222704,0.859484216193193,0,1.76473135295612,1.62307484934295
|short_description=p2@Ssh1
}}
}}

Latest revision as of 16:21, 1 October 2015

Short description:p2@Ssh1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ssh1_5end
Coexpression cluster:MCL_coexpression_mm9:15
Association with transcript: 0bp_to_ENSMUST00000077689, uc008yyx.1_5end
EntrezGene:Ssh1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ssh1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.05
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A117.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A319.84
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I27.11
Ileum epithelium, pool1.CNhs13199.10252-104B92.85
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C415.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C311.64
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H76.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.34
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I328.42
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E35.62
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H65.90
liver, embryo E14.CNhs10594.409-16E110.79
liver, embryo E15.CNhs10520.433-16D718.66
liver, embryo E16.CNhs10523.462-17F511.09
liver, embryo E17.CNhs10510.481-18A313.50
liver, embryo E18.CNhs10579.499-43G410.36
liver, neonate N00.CNhs11117.641-24F411.03
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G218.11
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D151.24
spleen, neonate N20.CNhs11112.824-19H137.86
spleen, neonate N25.CNhs11099.1354-25G347.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell1.08e-076
gut absorptive cell1.08e-076
enterocyte1.08e-076
megakaryocyte-erythroid progenitor cell7.32e-079

Uber anatomy
Ontology termp-valuen
organ component layer3.57e-1624
gastrointestinal system4.78e-1347
mucosa2.21e-1015
digestive system2.72e-09116
digestive tract2.72e-09116
primitive gut2.72e-09116
endoderm-derived structure6.06e-09118
endoderm6.06e-09118
presumptive endoderm6.06e-09118
spleen1.11e-086
cavity lining1.11e-086
serous membrane1.11e-086
gastrointestinal system mesentery1.11e-086
stomach region1.11e-086
mesentery1.11e-086
gastrointestinal system serosa1.11e-086
mesentery of stomach1.11e-086
gut mesentery1.11e-086
dorsal mesentery1.11e-086
dorsal mesogastrium1.11e-086
peritoneal cavity1.11e-086
spleen primordium1.11e-086
intestinal mucosa2.50e-0813
wall of intestine2.50e-0813
gastrointestinal system mucosa2.50e-0813
subdivision of digestive tract3.80e-08114
liver5.55e-0822
epithelial sac5.55e-0822
digestive gland5.55e-0822
epithelium of foregut-midgut junction5.55e-0822
anatomical boundary5.55e-0822
hepatobiliary system5.55e-0822
foregut-midgut junction5.55e-0822
hepatic diverticulum5.55e-0822
liver primordium5.55e-0822
septum transversum5.55e-0822
liver bud5.55e-0822
digestive tract diverticulum1.75e-0723
sac1.75e-0723
stomach2.00e-0716
food storage organ2.00e-0716
intestine5.56e-0731
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