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FFCP PHASE1:Mm9::chr4:137923867..137923880,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:137923867..137923880,-
|DHSsupport=NA
|short_description=p2@Cda
|DPIdataset=NA
|description=CAGE_peak_2_at_Cda_5end
|association_with_transcript=0bp_to_NM_028176,uc008vkw.1_5end
|EntrezGene=72269
|EntrezGene=72269
|HGNC=
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=A2AM79,P56389
|UniProt=A2AM79,P56389
|association_with_transcript=0bp_to_NM_028176,uc008vkw.1_5end
|cluster_id=chr4:137923867..137923880,-
|description=CAGE_peak_2_at_Cda_5end
|id=chr4:137923867..137923880,-
|ontology_enrichment_celltype=CL:0000066!7.58e-08!25;CL:0002563!8.18e-07!9;CL:0002251!8.18e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000066,9.04e-11,25;CL:0000223,6.72e-10,20;CL:0002563,8.01e-09,9;CL:0002251,8.01e-09,9;CL:0002076,2.41e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.24e-13!43;UBERON:0005409!1.30e-11!59;UBERON:0000344!3.99e-10!15;UBERON:0004119!4.20e-09!130;UBERON:0000925!4.20e-09!130;UBERON:0006595!4.20e-09!130;UBERON:0001242!6.81e-09!13;UBERON:0000060!6.81e-09!13;UBERON:0001262!6.81e-09!13;UBERON:0004786!6.81e-09!13;UBERON:0001007!2.28e-08!128;UBERON:0001555!2.28e-08!128;UBERON:0007026!2.28e-08!128;UBERON:0005177!7.05e-08!85;UBERON:0004921!1.36e-07!126;UBERON:0004185!1.36e-07!126;UBERON:0002100!1.60e-07!98;UBERON:0009854!2.53e-07!23;UBERON:0009856!2.53e-07!23;UBERON:0002107!5.10e-07!22;UBERON:0007499!5.10e-07!22;UBERON:0006925!5.10e-07!22;UBERON:0009497!5.10e-07!22;UBERON:0000015!5.10e-07!22;UBERON:0002423!5.10e-07!22;UBERON:0006235!5.10e-07!22;UBERON:0008835!5.10e-07!22;UBERON:0003894!5.10e-07!22;UBERON:0004161!5.10e-07!22;UBERON:0008836!5.10e-07!22;UBERON:0003350!8.18e-07!9;UBERON:0004808!8.18e-07!9;UBERON:0001277!8.18e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.51e-17,31;UBERON:0000344,2.19e-13,15;UBERON:0005409,3.33e-12,47;UBERON:0001242,1.10e-11,13;UBERON:0001262,1.10e-11,13;UBERON:0004786,1.10e-11,13;UBERON:0004119,5.63e-11,118;UBERON:0000925,5.63e-11,118;UBERON:0006595,5.63e-11,118;UBERON:0001007,5.34e-10,116;UBERON:0001555,5.34e-10,116;UBERON:0007026,5.34e-10,116;UBERON:0004921,5.70e-09,114;UBERON:0003350,8.01e-09,9;UBERON:0004808,8.01e-09,9;UBERON:0001277,8.01e-09,9;UBERON:0004923,1.83e-08,24;UBERON:0009854,1.42e-07,23;UBERON:0009856,1.42e-07,23;UBERON:0002107,3.59e-07,22;UBERON:0007499,3.59e-07,22;UBERON:0006925,3.59e-07,22;UBERON:0009497,3.59e-07,22;UBERON:0000015,3.59e-07,22;UBERON:0002423,3.59e-07,22;UBERON:0006235,3.59e-07,22;UBERON:0008835,3.59e-07,22;UBERON:0003894,3.59e-07,22;UBERON:0004161,3.59e-07,22;UBERON:0008836,3.59e-07,22
|phase1_expression=0.480446541314382,23.7303277194766,26.8449551239826,43.8573106394904,52.5940516443665,5.37213670118047,4.43864017131499,0,0,0,0,0,0,0,0.666219523631325,0.809901069559304,0,0,0,0,6.4632900514813,0,0,15.5192650109604,14.6821939882989,20.0981187440257,24.1226717849082,14.2211013572687,16.3420140732482,14.617747526076,1.55211357458713,2.54012269383853,3.07532393792285,0,4.33277429626912,6.4831511689812,7.75843553797003,0,0,0,0,0,0,1.51076181570693,0.405507724878058,1.46837401729345,0.782391344348039,0,1.09843091367236,0.58328969722285,1.1198913730029,0,0,0,0,2.57259436035947,1.71920063963254,1.03134418455488,0,0,0.633831403506179,3.04960078862219,1.77858959222228,0,0,0,0,0.384218305321555,0,0.135005938331691,0,1.14260393761521,2.20868540951614,0,0,0,0,1.14918604276669,1.22885226604995,0.131886287730194,0.182975287204819,0,1.11673199600552,1.12552522006336,1.22238598221448,1.76777151284201,1.70846016958924,0.559198337475902,0.530083353332288,0.831287161174641,2.31891590961342,8.60423876981386,11.5595126730318,1.61910957491345,3.24888208723835,1.79210754838934,3.7919993435573,0.340860645156116,1.03914401841148,0.70667914902068,0.704217098883403,0,0,0,2.59789249213457,2.28023878927589,3.0331466700887,4.79572294820052,0.517875767294343,1.7813056687779,1.38788261412909,1.52232739156071,0.691846491768175,0.60289056221049,0.470354828542819,1.25666591329675,0.988779870937496,0.289198713839823,0,0.323533699894818,0.220841518460394,0.969750506270444,1.86391761218122,0.585561594023094,0,20.6920214718959,0,0,0,0.748953197024114,0,0,0.173824320192276,0,1.0389402227978,0.324482526135515,0.916554274652847,0.373220911830279,0,0,0,0.919608417733892,0.360124259610698,0.753524089178575,0.340182495756639,0,0.187403449119458,0.258703370739016,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,1.08037236876609,0.710234206755631,1.57411385397923,1.3884040159864,0.465067889500816,0,0,0.329119699826961,0.985004784474571,0.243206428637567,0.584799949701329,1.09775057645525,0.134206418760372,0,0,51.5453301454725,7.40461586657924,0.639864751605702,0.232236671860439,0.77320476793256,1.21010114774006,2.00140239460383,1.33157938278791,18.9811624617805,2.63518327558417,1.50801125280162,1.98956472041151,1.55971269695296,16.178749355776,17.0749059401008,25.8883655230677,0.758671603812327,1.5994791765362,0,0.610953983535943,2.32742984601151,2.52488951605147,8.03104021478068,13.4325234661438,19.9388384358546,26.7771845710307,2.07516838961004,0.333690211432188,0.786235980452812,1.12431056192427,0.811440485554012,1.4470629585145,0.763877555344259,1.15078454980324,1.94562272130042,3.56929837144506,1.43768206527355,2.60498663367952,4.36852742360385,4.04126204715379,4.84373016509163,3.37710464954357,0.184753190166605,0.757965647081939,1.62964976442026,2.37643120085263,1.64283173801951,1.34005005953453,0.714130922658041,0.585400943573396,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0,0.983528546038072,0.275936746304732,0.963303539926752,0.35163505977661,7.21313759657372,0,2.2085575359138,0.780877488593277,0.646270193198397,0.955875191810208,2.67358408898873,2.26461224631066,0.404810701674894,2.63030272120181,1.97643888973262,0,0.283880170416537,0.712262414669021,0,0.329940245945071,0,4.12727081463468,3.32555912661226,1.50884063804718,0.885905678642318,0.614870295887855,2.32585463851399,1.81766864738753,1.06949213515416,0.948110273807448,1.05418608574999,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0.532020700926821,1.07021290561242,0.987294123612726,1.522324745573,5.16277757740163,4.87213762986786,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0.164140899745061,6.70405924248657,1.48340241608408,0.170870880797853,0.619160603889667,0.555583582109135,0,0,0,0,0,0,2.86401185404534,0.632671987162271,1.21991680276109,0.540026704109006,1.04544148007234,0.87345025498471,1.07891477107857,0.743881101528023,1.04702376793612,5.57344385154709,0,0,0.299033092087958,0.992750942742586,1.36115831840833,0.516639293910924,0.506868376472335,0.117357238645754,0.651021924219751,0.314578033277133,0.241584120826006,0,0,0.608175645870493,0.410843828659309,0.389762468933385,0,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.443971906748129,0.897138566094757,1.67884616364078,0.386379188064381,3.94133198447482,1.28206136987086,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0.243106717068294,0.628839487883947,0,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.640251524048693,0.689225627467359,0.476293691283074,0.231768651889711,0,0.824171801606613,0.294397840268795,1.37147700954166,0,0.715308569841963,0.726732083161643,0.470546902076653,0.846146078916765,0.548783918618318,0,0.135804113845862,1.68342681497322,0.474540072496697,0.0985044823755635,1.22769312950907,0.929621047115796,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0.220591419119515,0.695603506861264
|phase1_expression=0.480446541314382,23.7303277194766,26.8449551239826,43.8573106394904,52.5940516443665,5.37213670118047,4.43864017131499,0,0,0,0,0,0,0,0.666219523631325,0.809901069559304,0,0,0,0,6.4632900514813,0,0,15.5192650109604,14.6821939882989,20.0981187440257,24.1226717849082,14.2211013572687,16.3420140732482,14.617747526076,1.55211357458713,2.54012269383853,3.07532393792285,0,4.33277429626912,6.4831511689812,7.75843553797003,0,0,0,0,0,0,1.51076181570693,0.405507724878058,1.46837401729345,0.782391344348039,0,1.09843091367236,0.58328969722285,1.1198913730029,0,0,0,0,2.57259436035947,1.71920063963254,1.03134418455488,0,0,0.633831403506179,3.04960078862219,1.77858959222228,0,0,0,0,0.384218305321555,0,0.135005938331691,0,1.14260393761521,2.20868540951614,0,0,0,0,1.14918604276669,1.22885226604995,0.131886287730194,0.182975287204819,0,1.11673199600552,1.12552522006336,1.22238598221448,1.76777151284201,1.70846016958924,0.559198337475902,0.530083353332288,0.831287161174641,2.31891590961342,8.60423876981386,11.5595126730318,1.61910957491345,3.24888208723835,1.79210754838934,3.7919993435573,0.340860645156116,1.03914401841148,0.70667914902068,0.704217098883403,0,0,0,2.59789249213457,2.28023878927589,3.0331466700887,4.79572294820052,0.517875767294343,1.7813056687779,1.38788261412909,1.52232739156071,0.691846491768175,0.60289056221049,0.470354828542819,1.25666591329675,0.988779870937496,0.289198713839823,0,0.323533699894818,0.220841518460394,0.969750506270444,1.86391761218122,0.585561594023094,0,20.6920214718959,0,0,0,0.748953197024114,0,0,0.173824320192276,0,1.0389402227978,0.324482526135515,0.916554274652847,0.373220911830279,0,0,0,0.919608417733892,0.360124259610698,0.753524089178575,0.340182495756639,0,0.187403449119458,0.258703370739016,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,1.08037236876609,0.710234206755631,1.57411385397923,1.3884040159864,0.465067889500816,0,0,0.329119699826961,0.985004784474571,0.243206428637567,0.584799949701329,1.09775057645525,0.134206418760372,0,0,51.5453301454725,7.40461586657924,0.639864751605702,0.232236671860439,0.77320476793256,1.21010114774006,2.00140239460383,1.33157938278791,18.9811624617805,2.63518327558417,1.50801125280162,1.98956472041151,1.55971269695296,16.178749355776,17.0749059401008,25.8883655230677,0.758671603812327,1.5994791765362,0,0.610953983535943,2.32742984601151,2.52488951605147,8.03104021478068,13.4325234661438,19.9388384358546,26.7771845710307,2.07516838961004,0.333690211432188,0.786235980452812,1.12431056192427,0.811440485554012,1.4470629585145,0.763877555344259,1.15078454980324,1.94562272130042,3.56929837144506,1.43768206527355,2.60498663367952,4.36852742360385,4.04126204715379,4.84373016509163,3.37710464954357,0.184753190166605,0.757965647081939,1.62964976442026,2.37643120085263,1.64283173801951,1.34005005953453,0.714130922658041,0.585400943573396,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0,0.983528546038072,0.275936746304732,0.963303539926752,0.35163505977661,7.21313759657372,0,2.2085575359138,0.780877488593277,0.646270193198397,0.955875191810208,2.67358408898873,2.26461224631066,0.404810701674894,2.63030272120181,1.97643888973262,0,0.283880170416537,0.712262414669021,0,0.329940245945071,0,4.12727081463468,3.32555912661226,1.50884063804718,0.885905678642318,0.614870295887855,2.32585463851399,1.81766864738753,1.06949213515416,0.948110273807448,1.05418608574999,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0.532020700926821,1.07021290561242,0.987294123612726,1.522324745573,5.16277757740163,4.87213762986786,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0.164140899745061,6.70405924248657,1.48340241608408,0.170870880797853,0.619160603889667,0.555583582109135,0,0,0,0,0,0,2.86401185404534,0.632671987162271,1.21991680276109,0.540026704109006,1.04544148007234,0.87345025498471,1.07891477107857,0.743881101528023,1.04702376793612,5.57344385154709,0,0,0.299033092087958,0.992750942742586,1.36115831840833,0.516639293910924,0.506868376472335,0.117357238645754,0.651021924219751,0.314578033277133,0.241584120826006,0,0,0.608175645870493,0.410843828659309,0.389762468933385,0,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.443971906748129,0.897138566094757,1.67884616364078,0.386379188064381,3.94133198447482,1.28206136987086,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0.243106717068294,0.628839487883947,0,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.640251524048693,0.689225627467359,0.476293691283074,0.231768651889711,0,0.824171801606613,0.294397840268795,1.37147700954166,0,0.715308569841963,0.726732083161643,0.470546902076653,0.846146078916765,0.548783918618318,0,0.135804113845862,1.68342681497322,0.474540072496697,0.0985044823755635,1.22769312950907,0.929621047115796,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0.220591419119515,0.695603506861264
|short_description=p2@Cda
}}
}}

Latest revision as of 14:10, 26 September 2015

Short description:p2@Cda
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cda_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_NM_028176, uc008vkw.1_5end
EntrezGene:Cda
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cda

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I523.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I626.84
CD326+ enterocyte, pool1.CNhs13542.11848-124I343.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I452.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.37
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.68
GP2+ M cell, pool1.CNhs13228.11845-124H920.10
GP2+ M cell, pool2.CNhs13231.11846-124I124.12
GP2+ M cell, pool3.CNhs13240.11847-124I214.22
Ileum epithelium, pool1.CNhs13199.10252-104B916.34
Ileum epithelium, pool2.CNhs13232.10253-104C114.62
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H720.69
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I351.55
intestine, adult.CNhs10496.178-9A37.40
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D118.98
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E317.07
intestine, neonate N30.CNhs11131.1384-42G125.89
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.52
kidney, neonate N10.CNhs11206.758-6D58.03
kidney, neonate N20.CNhs11113.832-19I113.43
kidney, neonate N25.CNhs11122.1353-25F319.94
kidney, neonate N30.CNhs11203.1385-42H126.78
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I15.57
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell9.04e-1125
endodermal cell6.72e-1020
intestinal epithelial cell8.01e-099
epithelial cell of alimentary canal8.01e-099
endo-epithelial cell2.41e-0715

Uber anatomy
Ontology termp-valuen
intestine3.51e-1731
mucosa2.19e-1315
gastrointestinal system3.33e-1247
intestinal mucosa1.10e-1113
wall of intestine1.10e-1113
gastrointestinal system mucosa1.10e-1113
endoderm-derived structure5.63e-11118
endoderm5.63e-11118
presumptive endoderm5.63e-11118
digestive system5.34e-10116
digestive tract5.34e-10116
primitive gut5.34e-10116
subdivision of digestive tract5.70e-09114
epithelium of mucosa8.01e-099
gastrointestinal system epithelium8.01e-099
intestinal epithelium8.01e-099
organ component layer1.83e-0824
digestive tract diverticulum1.42e-0723
sac1.42e-0723
liver3.59e-0722
epithelial sac3.59e-0722
digestive gland3.59e-0722
epithelium of foregut-midgut junction3.59e-0722
anatomical boundary3.59e-0722
hepatobiliary system3.59e-0722
foregut-midgut junction3.59e-0722
hepatic diverticulum3.59e-0722
liver primordium3.59e-0722
septum transversum3.59e-0722
liver bud3.59e-0722
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