FFCP PHASE1:Mm9::chr3:53267122..53267154,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:53267122..53267154,- to FFCP PHASE1:Mm9::chr3:53267122..53267154,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=212114 | |EntrezGene=212114 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=423 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CCH2,Q5DTP3,D6RE41 | |UniProt=Q8CCH2,Q5DTP3,D6RE41 | ||
|association_with_transcript=25bp_to_NM_172501,uc008per.1,uc008pes.1,uc008pet.1_5end | |||
|cluster_id=chr3:53267122..53267154,- | |||
|description=CAGE_peak_2_at_Nhlrc3_5end | |||
|id=chr3:53267122..53267154,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.16e-09!59;UBERON:0000160!2.55e-08!43;UBERON:0004119!1.15e-07!130;UBERON:0000925!1.15e-07!130;UBERON:0006595!1.15e-07!130;UBERON:0001007!6.24e-07!128;UBERON:0001555!6.24e-07!128;UBERON:0007026!6.24e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.13e-12,31;UBERON:0005409,8.36e-12,47;UBERON:0004119,3.24e-10,118;UBERON:0000925,3.24e-10,118;UBERON:0006595,3.24e-10,118;UBERON:0001007,2.74e-09,116;UBERON:0001555,2.74e-09,116;UBERON:0007026,2.74e-09,116;UBERON:0004921,1.42e-08,114;UBERON:0000344,7.64e-07,15;UBERON:0004923,7.92e-07,24 | |||
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|phase1_expression=0.640595388419176,3.83872948403297,1.81999695755814,6.0492842261366,6.51164448930251,1.84667199103079,1.63528848416868,0.129123323441576,2.111830832275,2.10658073689794,0.513653904676515,0.478632953972018,1.02720437958723,0.174840804837995,0.333109761815663,0.607425802169478,0.699561878128147,0.473193248037357,1.37114433605739,2.12194825899015,1.10556277196391,1.09220046320974,0.783599367416806,3.19984845586813,3.21172993494038,5.16808767703518,4.73838195774982,2.37018355954478,5.13063232532209,4.78857246543868,2.21730510655305,0,0,0,1.1554064790051,2.1610503896604,1.63335485009895,0.837063261473815,3.1253413780952,0.523523743973798,4.70585190424811,1.36609096991689,1.45653105909346,1.88845226963366,1.52065396829272,1.46837401729345,2.34717403304412,0.65407546914134,0.878744730937887,0.777719596297134,0.839918529752175,0,0.671130424230945,2.17608642603403,0,1.28629718017973,1.71920063963254,1.03134418455488,0.809265843438391,0.528990979272033,0.633831403506179,0,0,5.39939830368839,12.8552627133707,3.5524005747305,1.49800055259202,1.15265491596466,0.207379224616955,0.405017814995072,0.210324961351382,1.14260393761521,0.441737081903227,0,0,0,2.20231761998777,1.27687338085188,1.22885226604995,1.18697658957174,0.731901148819277,0.52091337055676,1.67509799400829,0.56276261003168,1.37518422999129,0.294628585473668,0.284743361598206,0.745597783301202,0.605809546665472,0.529000920747499,8.69593466105033,6.88339101585109,4.75979933595425,0,1.29955283489534,0.896053774194671,0.983110940922263,0.511290967734173,0.259786004602869,0.35333957451034,0.14084341977668,0,5.09610479413291,7.11066703153331,1.29894624606728,1.52015919285059,2.02209778005913,3.53970027129086,4.40194402200192,1.33597925158342,1.21439728736295,1.21786191324856,1.38369298353635,0.904335843315735,1.76383060703557,0.879666139307728,15.8204779349999,2.60278842455841,0,0.970601099684455,1.76673214768315,0.969750506270444,3.72783522436244,0.878342391034642,0.628340120440365,3.57639877292028,1.43778149407104,1.79970819298022,1.01656181658452,1.3481157546434,0,0.376963056338593,0.869121600961382,3.06858548796397,1.45451631191692,1.29793010454206,0.916554274652847,1.11966273549084,2.27450482590307,3.15662783829711,0.650602214813519,0,1.26043490863744,0.753524089178575,0.95251098811859,0.768682321709099,0.562210347358373,3.62184719034622,0.646703978798527,0.378212160335639,1.23165786914764,0.876782929710299,0.278047249225598,0.696504333044333,1.4404749548556,0.59710280045548,0.702213187313235,2.05878325691772,1.13665399758237,0.828503090142008,1.17263029990548,0.180062061461015,0.473489471170421,1.18058539048442,0.308534225774757,0.232533944750408,0.536546802799238,0.817357396570186,0.329119699826961,0.32833492815819,0.648550476366846,0.292399974850665,2.41505126820156,1.20785776884335,1.05144974282064,0.514523061896422,8.59088835757875,3.17340679996253,0.853153002140936,0.928946687441754,1.54640953586512,4.43703754171354,5.78182913996663,9.51128130562796,1.89811624617805,12.1877226495768,12.8180956488137,9.94782360205754,9.35827618171777,1.79763881730844,7.78096979548899,6.17337947088538,0.948339504765408,1.02823661348756,1.1270773567308,1.4255592949172,0.969762435838129,1.47285221769669,2.02356918797623,2.95220295959204,3.45397201251025,2.22114895059241,4.15033677922008,1.00107063429656,0.589676985339609,1.12431056192427,0.608580364165509,0.482354319504834,1.01850340712568,2.30156909960649,2.7562988551756,0.823684239564244,1.43768206527355,2.60498663367952,1.87222603868736,2.02063102357689,2.87035861635059,2.8946611281802,2.03228509183265,0.37898282354097,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,1.42826184531608,2.73187107000918,2.20689201748667,1.99318220683897,3.02964060449226,2.45794972073607,3.45369963731791,2.31438493730419,22.6186925908908,5.98296252200581,15.2446924635901,9.93372286697037,1.28440471990234,1.64096361229084,0.819674726883377,1.51482556322624,0.315508219416257,1.17131623288992,0.861693590931196,0.955875191810208,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,1.28528526568723,0.851640511249612,0.890328018336276,0.81443479676788,1.81467135269789,0,1.21390318077491,0.604647113929502,0.754420319023592,1.18120757152309,0.922305443831782,2.84271122485043,1.09060118843252,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,1.02131881726136,1.44048875225048,0.776152102696527,0.643011105094777,0.354680467284547,1.42695054081656,1.48094118541909,0.913394847343798,5.63212099352905,12.2862601101016,0.882113592219848,0.8244312647074,1.77610869365496,0.72375509913787,1.07435109602823,0.164140899745061,6.70405924248657,0.556275906031529,1.02522528478712,1.65109494370578,1.11116716421827,0.941842285023455,1.23024804948923,0.686334519619568,1.35982743995084,0.979660166265606,2.3493995546752,4.77335309007557,0.790839983952838,0.609958401380546,1.83609079397062,0.836353184057875,2.18362563746178,2.69728692769641,3.63675205191478,2.8793153618243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| ||
|short_description=p2@Nhlrc3 | |||
}} | }} |
Latest revision as of 14:17, 25 September 2015
Short description: | p2@Nhlrc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nhlrc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:423 |
Association with transcript: | 25bp_to_NM_172501, uc008per.1, uc008pes.1, uc008pet.1_5end |
EntrezGene: | Nhlrc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.13e-12 | 31 |
gastrointestinal system | 8.36e-12 | 47 |
endoderm-derived structure | 3.24e-10 | 118 |
endoderm | 3.24e-10 | 118 |
presumptive endoderm | 3.24e-10 | 118 |
digestive system | 2.74e-09 | 116 |
digestive tract | 2.74e-09 | 116 |
primitive gut | 2.74e-09 | 116 |
subdivision of digestive tract | 1.42e-08 | 114 |
mucosa | 7.64e-07 | 15 |
organ component layer | 7.92e-07 | 24 |