FFCP PHASE1:Mm9::chr2:29917565..29917598,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:29917565..29917598,+ to FFCP PHASE1:Mm9::chr2:29917565..29917598,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56086 | |EntrezGene=56086 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=101 | |||
|TSSclassifier=NA | |||
|UniProt=Q3T9S3,Q9EQU5 | |UniProt=Q3T9S3,Q9EQU5 | ||
|association_with_transcript=2bp_to_uc008jaw.1,uc008jax.1_5end | |||
|cluster_id=chr2:29917565..29917598,+ | |||
|description=CAGE_peak_3_at_Set_5end | |||
|id=chr2:29917565..29917598,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.40e-10!29;UBERON:0002370!3.78e-08!23;UBERON:0000974!3.78e-08!23;UBERON:0004807!3.78e-08!23;UBERON:0005058!3.78e-08!23;UBERON:0003351!3.78e-08!23;UBERON:0009113!3.78e-08!23;UBERON:0003295!3.78e-08!23;UBERON:0009722!3.78e-08!23;UBERON:0005562!3.78e-08!23;UBERON:0007690!3.78e-08!23;UBERON:0000072!7.79e-08!27;UBERON:0006562!3.42e-07!24;UBERON:0001557!3.42e-07!24;UBERON:0001042!3.42e-07!24;UBERON:0008814!3.42e-07!24;UBERON:0009145!3.42e-07!24;UBERON:0003408!3.81e-07!24;UBERON:0002390!6.89e-07!45;UBERON:0003061!6.89e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.39e-10,29;UBERON:0005057,4.39e-10,29;UBERON:0002370,3.78e-08,23;UBERON:0000974,3.78e-08,23;UBERON:0004807,3.78e-08,23;UBERON:0005058,3.78e-08,23;UBERON:0003351,3.78e-08,23;UBERON:0009113,3.78e-08,23;UBERON:0003295,3.78e-08,23;UBERON:0009722,3.78e-08,23;UBERON:0005562,3.78e-08,23;UBERON:0007690,3.78e-08,23;UBERON:0000077,4.94e-08,35;UBERON:0000072,7.78e-08,27;UBERON:0006562,3.42e-07,24;UBERON:0001557,3.42e-07,24;UBERON:0001042,3.42e-07,24;UBERON:0008814,3.42e-07,24;UBERON:0009145,3.42e-07,24;UBERON:0003408,3.80e-07,24;UBERON:0002390,6.81e-07,45;UBERON:0003061,6.81e-07,45 | |||
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| |phase1_expression=12.1713123799643,3.14077866875425,1.81999695755814,0,0.500895729946347,20.8170297170743,22.4268134971705,12.1375924035082,147.405792092795,154.014458319872,155.637133116984,202.541511689159,6.50562773738582,5.33264454755884,36.9751835615386,27.7391116324062,13.2916756844348,10.7257136221801,12.614527891728,14.8536378129311,3.57181818634493,43.290854723586,42.0531660513686,12.3194165550923,8.71755268055246,5.16808767703518,9.04600191934057,14.8675150553263,2.28028103347649,4.53654233567875,20.399206980288,15.2407361630311,17.221814052368,47.5445043046316,12.9983228888074,19.7819227976606,16.3335485009895,1.67412652294763,0.7813353445238,4.18818995179039,0,0,0,11.2048167998264,11.5569701590247,17.9875817118448,10.1710874765245,4.79655344036982,5.71184075109627,1.74986909166855,6.99932108126813,7.18762821824858,9.06026072711776,15.2326049822382,25.2070349356848,7.97504251711436,8.88253663810146,1.54701627683233,6.27181028664753,5.81890077199236,4.43681982454325,17.958760199664,14.2287167377782,1.3498495759221,0.988866362566974,0,4.49400165777607,2.30530983192933,13.4796496001021,11.8805225731888,15.1433972172995,3.42781181284564,2.87129103237098,10.656699531701,7.66763768145891,7.35375029288017,3.30347642998166,2.29837208553338,2.30409799884365,4.3522474950964,2.56165402086747,1.56274011167028,2.51264699101243,1.68828783009504,1.83357897332172,3.83017161115768,3.13217697758026,4.65998614563251,17.9471078199646,18.8928900266964,4.34796733052517,1.72084775396277,3.39985666853875,3.2382191498269,4.54843492213368,5.37632264516803,6.88177658645584,15.8500199997594,10.9110121933205,10.9535268098205,6.05626705039726,8.98285341900225,28.028576367731,28.4426681261332,20.9996309780878,20.522149103483,20.2209778005913,6.39429726426736,10.8753911131812,8.75808620482466,33.8296387193965,20.7036525252256,21.6778567420695,15.8258772580254,9.28950786372068,7.41432888845085,7.41584903203122,2.31358971071859,7.07688441559899,12.9413479957927,13.471332626084,10.1823803158397,1.86391761218122,3.22058876712702,2.09446706813455,4.59822699375465,54.7555118992056,44.9927048245056,70.9051867067701,4.49371918214468,1.83000241127451,6.78533501409468,1.73824320192276,0.511430914660661,2.0778804455956,2.10913641988085,13.7483141197927,7.58882520721567,2.52722758433675,1.26265113531884,30.8385449821608,19.3117767724117,18.9065236295617,12.6592046982001,5.51095643125756,4.74020765053944,5.05989312622536,2.06962696591213,56.2632461554718,29.6896545863476,19.5305747821983,18.6316372563439,22.2437799380478,16.0195996600197,13.7874031393322,32.0445169577774,42.1327912387941,46.3226232806487,65.6417683603819,25.0622184767957,18.9966108584688,16.2055855314913,15.1516630774535,9.44468312387538,10.0273623376796,8.60375595576509,8.04820204198858,5.3712057488898,4.11399624783701,3.11918181750281,2.51313309592153,2.04679982395465,2.19550115291051,1.20785776884335,1.89260953707715,6.68879980465349,0,18.7759902331116,46.2835503661458,36.4611574820889,48.7119003797513,27.6306428733979,21.1259141652627,16.1691782195675,4.2707615539006,5.92916237006439,5.02670417600539,5.76973768919337,5.8489226135736,2.69645822596266,5.40345124686736,3.78368419183298,42.1062740115841,39.8727309007954,22.5415471346161,24.8454619971283,18.0375813065892,9.46833568519301,4.93244989569207,1.62371162777562,1.72698600625512,0.987177311374404,4.15033677922008,62.4000695378192,80.9823059866396,45.4221467017405,36.9205420927075,25.5647789337562,17.8238096246994,17.5494643844994,11.8358715545776,16.1991233780968,10.0637744569148,3.72140947668503,2.80833905803104,4.54641980304801,5.56131981917928,0.964887042726734,3.8798169934987,47.9413271779326,42.5338588513688,40.0598402429444,24.6424760702927,17.253144516507,13.0924002487308,6.04914308359176,5.67486518782288,5.97954662051692,3.18909537314974,2.62181303545181,3.28101465545202,1.73578870297814,0,3.80733978673097,0.491764273019036,3.31124095565679,2.24770825982909,1.87538698547525,42.4591508525589,1.51482556322624,29.0267561862956,25.3785183792815,15.7259080344943,29.871099744069,18.0466926006739,22.3630459323178,25.0982635038434,18.9966307642353,22.5314033429518,1.28528526568723,16.1811697137426,24.7511189097485,14.3340524231147,12.5377293459127,1.32745138339963,38.844901784797,39.9067095193471,17.5402724172985,18.3087173586079,9.53048958626175,6.20227903603731,7.27067458955011,5.70395805415554,4.10847785316561,4.21674434299995,3.09406629744561,2.38307724027652,20.3469036255381,14.1000965323202,15.4322665222746,8.86701168211368,7.84822797449111,6.41741180348272,3.34911444026059,34.9660845014928,12.2862601101016,2.64634077665954,5.60613260001032,9.36493674836252,16.8876189798836,9.31104283224465,10.0125948844487,5.24665505933731,4.26478194624172,25.8015030004758,26.6239059672557,38.8908507476395,25.0530047816239,23.5114071680163,19.9037010689675,23.1170664791643,29.1099020833209,27.3635948132759,6.68269432610579,37.4858152393645,25.4149333908561,19.9809880520332,13.1725626489115,9.82631536857799,7.28267470478032,5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| ||
|short_description=p3@Set | |||
}} | }} |
Latest revision as of 12:47, 26 September 2015
Short description: | p3@Set |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Set_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 2bp_to_uc008jaw.1, uc008jax.1_5end |
EntrezGene: | Set |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 4.39e-10 | 29 |
immune organ | 4.39e-10 | 29 |
thymus | 3.78e-08 | 23 |
neck | 3.78e-08 | 23 |
respiratory system epithelium | 3.78e-08 | 23 |
hemolymphoid system gland | 3.78e-08 | 23 |
pharyngeal epithelium | 3.78e-08 | 23 |
thymic region | 3.78e-08 | 23 |
pharyngeal gland | 3.78e-08 | 23 |
entire pharyngeal arch endoderm | 3.78e-08 | 23 |
thymus primordium | 3.78e-08 | 23 |
early pharyngeal endoderm | 3.78e-08 | 23 |
mixed endoderm/mesoderm-derived structure | 4.94e-08 | 35 |
segment of respiratory tract | 7.78e-08 | 27 |
pharynx | 3.42e-07 | 24 |
upper respiratory tract | 3.42e-07 | 24 |
chordate pharynx | 3.42e-07 | 24 |
pharyngeal arch system | 3.42e-07 | 24 |
pharyngeal region of foregut | 3.42e-07 | 24 |
gland of gut | 3.80e-07 | 24 |
hematopoietic system | 6.81e-07 | 45 |
blood island | 6.81e-07 | 45 |