FFCP PHASE1:Mm9::chr17:35400032..35400045,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:35400032..35400045,+ to FFCP PHASE1:Mm9::chr17:35400032..35400045,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14964 | |EntrezGene=14964 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=718 | |||
|TSSclassifier=NA | |||
|UniProt=E9QQ06,P01899,Q792Z7,Q31151,Q8R3Y0 | |UniProt=E9QQ06,P01899,Q792Z7,Q31151,Q8R3Y0 | ||
|association_with_transcript=0bp_to_ENSMUST00000087173,NM_010380,uc008chf.1,uc008chg.1_5end | |||
|cluster_id=chr17:35400032..35400045,+ | |||
|description=CAGE_peak_1_at_H2-D1_5end | |||
|id=chr17:35400032..35400045,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.00e-14!66;CL:0000219!4.71e-12!54;CL:0002320!6.86e-11!46;CL:0000134!6.86e-11!46;CL:0000144!3.95e-10!121;CL:0000012!3.95e-10!121;CL:0000988!2.06e-09!32;CL:0002032!2.06e-09!32;CL:0000037!2.06e-09!32;CL:0000566!2.06e-09!32;CL:0000837!2.06e-09!32;CL:0002371!5.14e-09!118;CL:0002031!3.51e-08!25;CL:0000548!7.30e-08!115;CL:0000004!7.30e-08!115;CL:0000255!7.30e-08!115;CL:0000738!1.50e-07!17;CL:0002087!1.50e-07!17;CL:0000838!9.40e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,4.71e-12,54;CL:0002320,6.86e-11,46;CL:0000134,6.86e-11,46;CL:0000988,2.06e-09,32;CL:0002032,2.06e-09,32;CL:0000037,2.06e-09,32;CL:0000837,2.06e-09,32;CL:0002031,3.51e-08,25;CL:0000738,1.50e-07,17;CL:0002087,1.50e-07,17;CL:0000838,9.40e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.20e-12!70;UBERON:0004119!4.82e-12!130;UBERON:0000925!4.82e-12!130;UBERON:0006595!4.82e-12!130;UBERON:0001007!1.74e-11!128;UBERON:0001555!1.74e-11!128;UBERON:0007026!1.74e-11!128;UBERON:0002193!5.90e-11!48;UBERON:0002384!6.86e-11!46;UBERON:0004921!1.11e-10!126;UBERON:0004185!1.11e-10!126;UBERON:0002390!1.10e-09!45;UBERON:0003061!1.10e-09!45;UBERON:0002371!2.02e-08!16;UBERON:0004923!2.90e-08!24;UBERON:0000344!1.26e-07!15;UBERON:0003929!2.23e-07!55;UBERON:0005911!9.67e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.18e-12,118;UBERON:0000925,1.18e-12,118;UBERON:0006595,1.18e-12,118;UBERON:0001007,4.38e-12,116;UBERON:0001555,4.38e-12,116;UBERON:0007026,4.38e-12,116;UBERON:0004921,2.95e-11,114;UBERON:0002193,5.90e-11,48;UBERON:0002405,5.90e-11,48;UBERON:0002384,6.86e-11,46;UBERON:0002390,1.10e-09,45;UBERON:0003061,1.10e-09,45;UBERON:0002371,2.02e-08,16;UBERON:0004923,2.90e-08,24;UBERON:0000344,1.26e-07,15;UBERON:0003929,2.23e-07,55;UBERON:0000160,9.46e-07,31;UBERON:0005911,9.67e-07,69 | |||
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|phase1_expression=2.88267924788629,2896.84485881434,2772.76536483983,1486.00667015046,2347.19739052858,675.042552357709,591.740818628467,1601.38745732243,1842.92437296532,2093.47312342391,440.886268180675,406.518922240234,1177.51862046683,1468.92502184641,334.10909110111,328.009933171518,233.653667294801,953.484394795273,821.315457298375,905.647516936996,238.036169132844,255.177744586275,314.484546123278,715.486114732115,1015.82429656543,2241.22735594092,1716.58655469391,1550.53099040766,1344.79573949276,1509.40844713223,1462.9779093037,24.7661962649256,42.4394703433353,0,140.381887199119,167.398287876002,152.718678484252,1757.83284909501,1355.61682274879,1138.14061939904,2650.57108506775,2170.03550571298,1699.77174596207,15.8629990649227,16.3216859263418,4.77221555620372,701.022644535843,109.666653659365,312.393751848419,282.506643354934,239.936726665871,64.6886539642372,971.125723862178,1378.91343196357,1094.32141000786,129.401496326081,201.719541716885,530.110910861211,39.4517098676216,30.6814767977779,29.7900759647904,185.347959041815,124.50127145556,5497.03742301343,4424.18810612464,5639.0806723272,757.089479280009,629.733802422028,15.0349937847293,20.9259204414121,13.2504725651371,64.2714714908558,98.5073692644196,13.5964787128599,14.3768206527355,12.8690630125403,74.8787990795843,78.4000255843053,43.6242554447731,32.4440267816277,59.7414312723735,27.0874952689515,98.8307816464889,93.9813558752905,148.367098591283,39.7748590389451,46.1284245789094,67.8493982804094,232.630865919541,260.94859704873,616.541767468469,1009.27720769917,1849.52202768508,521.892986313769,399.612496730316,355.733348355284,202.80174267025,4.60161870960756,5.71529210126311,4.94675404314476,16.6195235336483,75.7126216744475,84.0857291031931,63.9960032837998,178.821599875263,182.419103142071,190.077191325559,411.061966988616,518.393643061638,357.893997285293,13.8788261412909,15.8322048722313,27.443244173471,36.324156373182,46.3299506114677,171.157897391018,209.374137671015,316.672591654606,301.652198214907,61.3096361300681,160.330942402246,147.402076953108,341.096923029164,55.9211322292055,55.2939305987521,679.260309799644,472.910296424867,677.290183291557,488.203812414715,30.7070810779887,47.5800626931372,15.2041766056566,15.4703644971126,18.4115129277838,36.1551197533635,20.2801578834697,38.9026369908208,257.149208251062,318.177952867996,228.329413636824,3.6433724029557,9.19608417733892,6.66229880279792,13.8648432408858,13.6072998302656,14.9893052733274,25.4868690802462,49.671047181891,3.01795190105979,3.21480336285293,4.39877810409872,10.9597866213787,8.61946472599353,13.2335823278423,26.7516777330327,6.96619933864726,487.335951995385,613.260062654366,363.160952227567,6.62802472113606,7.03578179943289,10.8037236876609,11.3637473080901,16.9217239302767,14.9639099500757,17.9051137457814,22.8032391189676,41.6852272250795,34.8866881816579,41.2060334838529,62.3419145407631,76.4625934234488,159.173833586012,202.383279490641,14.7202963994889,12.9659811597898,1265.50393882795,527.049979360444,7.46508876873319,7.66381017139447,22.1652033474001,40.3367049246685,82.0574981787571,145.332378349995,376.776074866342,363.161195166444,332.265146033956,350.561303736508,297.125268769539,351.438388783801,373.918826283221,367.017366607799,6.63837653335786,11.4248512609729,5.63538678365402,14.6628956048626,20.752916126936,35.8394039639528,47.3641663060687,89.7469699715981,89.1752774139009,129.196830626125,520.570813165033,15.3497497258807,21.4249304673391,25.8591429242582,29.0089973585559,42.9295344359302,56.7815649472566,85.4457528228908,119.980067813526,120.532460389568,125.078339678798,346.463222279377,224.979162315598,303.599811292428,319.865588309569,458.803788816562,603.588672274297,9.47457058852424,11.5705133273838,15.4468028055421,21.1221223459652,32.6637202011541,84.2674488736489,150.838309794078,95.6845324724579,174.071246063937,144.625475172341,392.124912114761,423.941630480774,520.158014659116,2088.45928255892,1694.8101107791,417.016103520143,388.794875543368,44.9541651965817,42.7822656061542,55.4100115373163,134.062062345522,56.4759712755099,58.9562503887924,42.4384093533614,44.6871652171272,44.5597348164788,40.1968673720142,57.8879303395099,59.3279391559963,43.8769433520641,28.5975971615408,117.24251038203,30.9834150381024,29.4825396429973,269.726151060096,152.656909090957,13.8384962608339,32.3486205952284,36.4007803928883,42.8187744677121,67.635732547664,131.798429515793,86.8845613451238,68.0909992714818,89.4384024958359,184.482565006248,200.082953901482,135.835402695761,6.48219938512717,11.5129228566652,14.3605813471167,7.80297028026004,14.8046118609719,19.087686389846,47.8009970109921,295.686352160275,420.698492735547,180.833286405069,309.161724265275,44.8871106214617,57.2972786817481,94.4235241064809,88.6360858623331,306.637840134603,46.7271761066484,429.056781683408,65.837410880268,90.0045403016799,120.555812483002,238.66812160091,354.60616847011,813.346787520598,851.884490294106,850.759038740033,266.353102426217,6.01038387804157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| ||
|short_description=p1@H2-D1 | |||
}} | }} |
Latest revision as of 10:08, 26 September 2015
Short description: | p1@H2-D1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_H2-D1_5end |
Coexpression cluster: | MCL_coexpression_mm9:718 |
Association with transcript: | 0bp_to_ENSMUST00000087173, NM_010380, uc008chf.1, uc008chg.1_5end |
EntrezGene: | H2-D1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 4.71e-12 | 54 |
connective tissue cell | 6.86e-11 | 46 |
mesenchymal cell | 6.86e-11 | 46 |
hematopoietic cell | 2.06e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.06e-09 | 32 |
hematopoietic stem cell | 2.06e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.06e-09 | 32 |
hematopoietic lineage restricted progenitor cell | 3.51e-08 | 25 |
leukocyte | 1.50e-07 | 17 |
nongranular leukocyte | 1.50e-07 | 17 |
lymphoid lineage restricted progenitor cell | 9.40e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.18e-12 | 118 |
endoderm | 1.18e-12 | 118 |
presumptive endoderm | 1.18e-12 | 118 |
digestive system | 4.38e-12 | 116 |
digestive tract | 4.38e-12 | 116 |
primitive gut | 4.38e-12 | 116 |
subdivision of digestive tract | 2.95e-11 | 114 |
hemolymphoid system | 5.90e-11 | 48 |
immune system | 5.90e-11 | 48 |
connective tissue | 6.86e-11 | 46 |
hematopoietic system | 1.10e-09 | 45 |
blood island | 1.10e-09 | 45 |
bone marrow | 2.02e-08 | 16 |
organ component layer | 2.90e-08 | 24 |
mucosa | 1.26e-07 | 15 |
gut epithelium | 2.23e-07 | 55 |
intestine | 9.46e-07 | 31 |
endo-epithelium | 9.67e-07 | 69 |