FFCP PHASE1:Mm9::chr17:28954648..28954666,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:28954648..28954666,+ to FFCP PHASE1:Mm9::chr17:28954648..28954666,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=489 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:28954648..28954666,+ | |||
|description=CAGE_peak_at_chr17:28954648..28954666,+ | |||
|id=chr17:28954648..28954666,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.99e-10!9;CL:0002251!3.99e-10!9;CL:0000239!1.12e-07!6;CL:0000677!1.12e-07!6;CL:0000212!1.12e-07!6;CL:0000584!1.12e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.79e-16,9;CL:0002251,1.79e-16,9;CL:0000239,3.25e-12,6;CL:0000677,3.25e-12,6;CL:0000584,3.25e-12,6;CL:0000075,2.39e-10,7;CL:0002076,3.70e-09,15;CL:0000066,6.81e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.22e-19!43;UBERON:0000344!2.28e-16!15;UBERON:0005409!4.08e-16!59;UBERON:0001242!1.65e-14!13;UBERON:0000060!1.65e-14!13;UBERON:0001262!1.65e-14!13;UBERON:0004786!1.65e-14!13;UBERON:0004923!4.86e-13!24;UBERON:0003350!3.99e-10!9;UBERON:0004808!3.99e-10!9;UBERON:0001277!3.99e-10!9;UBERON:0000485!8.34e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.72e-48,31;UBERON:0005409,1.71e-31,47;UBERON:0000344,2.25e-27,15;UBERON:0001242,4.01e-24,13;UBERON:0001262,4.01e-24,13;UBERON:0004786,4.01e-24,13;UBERON:0003350,1.79e-16,9;UBERON:0004808,1.79e-16,9;UBERON:0001277,1.79e-16,9;UBERON:0004923,1.16e-15,24;UBERON:0000485,3.82e-13,11;UBERON:0001007,4.81e-10,116;UBERON:0001555,4.81e-10,116;UBERON:0007026,4.81e-10,116;UBERON:0004119,9.61e-10,118;UBERON:0000925,9.61e-10,118;UBERON:0006595,9.61e-10,118;UBERON:0002108,2.88e-09,4;UBERON:0004921,1.33e-08,114;UBERON:0000331,2.81e-07,3;UBERON:0002116,2.81e-07,3;UBERON:0001204,2.81e-07,3;UBERON:0001168,2.81e-07,3 | |||
|phase1_expression=0,15.0059425284925,6.82498859084304,23.5922084819327,25.5456822272637,4.53274034162102,5.60670337429262,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,7.03966660290989,5.04700418347774,10.3361753540704,7.32295393470427,7.32602191132023,22.6127869153085,18.9022597319948,7.76056787293567,0,0,0,2.59966457776147,4.15586613396231,1.22501613757421,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.550517019262,0,0,21.7138496927303,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,18.5115396664481,0,0,0.257734922644187,6.45387278794696,8.45036566610507,18.2616601068057,15.6594590309689,13.0112174231969,13.8234364840148,13.9269530428806,17.1568396664826,20.6728463990471,14.0489732418551,13.541606581297,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13485269069154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.42366414172764,0,0,0,0,0,0,19.8206968908299,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0.648032044930808,0,0.655087691238533,0,0,0,17.2387914478085,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.367687016900028,0.666740183404846,1.03017528619447,2.24643446714271,0.252697211763798,0.760437899670719,1.50901073108861,0.468207537349412,0.768301828858431,0.746661096422973,1.42888107384922,0.695305955669133,0.964546102318525,0.412085900803307,0.588795680537589,1.02860775715625,0.70990322463735,0.953744759789284,0.872078499793971,0.658765662907314,0.846146078916765,0.73171189149109,0.789209134313529,1.08643291076689,1.12228454331548,1.42362021749009,0.591026894253381,2.45538625901814,0.77468420592983,0.964533054905707,0,0.467863216890817,1.28922632428979,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,15.0059425284925,6.82498859084304,23.5922084819327,25.5456822272637,4.53274034162102,5.60670337429262,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,7.03966660290989,5.04700418347774,10.3361753540704,7.32295393470427,7.32602191132023,22.6127869153085,18.9022597319948,7.76056787293567,0,0,0,2.59966457776147,4.15586613396231,1.22501613757421,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.550517019262,0,0,21.7138496927303,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,18.5115396664481,0,0,0.257734922644187,6.45387278794696,8.45036566610507,18.2616601068057,15.6594590309689,13.0112174231969,13.8234364840148,13.9269530428806,17.1568396664826,20.6728463990471,14.0489732418551,13.541606581297,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13485269069154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.42366414172764,0,0,0,0,0,0,19.8206968908299,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0.648032044930808,0,0.655087691238533,0,0,0,17.2387914478085,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.367687016900028,0.666740183404846,1.03017528619447,2.24643446714271,0.252697211763798,0.760437899670719,1.50901073108861,0.468207537349412,0.768301828858431,0.746661096422973,1.42888107384922,0.695305955669133,0.964546102318525,0.412085900803307,0.588795680537589,1.02860775715625,0.70990322463735,0.953744759789284,0.872078499793971,0.658765662907314,0.846146078916765,0.73171189149109,0.789209134313529,1.08643291076689,1.12228454331548,1.42362021749009,0.591026894253381,2.45538625901814,0.77468420592983,0.964533054905707,0,0.467863216890817,1.28922632428979,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr17:28954648..28954666,+ | |||
}} | }} |
Latest revision as of 13:26, 4 August 2015
Short description: | p@chr17:28954648..28954666, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:28954648..28954666, + |
Coexpression cluster: | MCL_coexpression_mm9:489 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.79e-16 | 9 |
epithelial cell of alimentary canal | 1.79e-16 | 9 |
brush border epithelial cell | 3.25e-12 | 6 |
gut absorptive cell | 3.25e-12 | 6 |
enterocyte | 3.25e-12 | 6 |
columnar/cuboidal epithelial cell | 2.39e-10 | 7 |
endo-epithelial cell | 3.70e-09 | 15 |
epithelial cell | 6.81e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.72e-48 | 31 |
gastrointestinal system | 1.71e-31 | 47 |
mucosa | 2.25e-27 | 15 |
intestinal mucosa | 4.01e-24 | 13 |
wall of intestine | 4.01e-24 | 13 |
gastrointestinal system mucosa | 4.01e-24 | 13 |
epithelium of mucosa | 1.79e-16 | 9 |
gastrointestinal system epithelium | 1.79e-16 | 9 |
intestinal epithelium | 1.79e-16 | 9 |
organ component layer | 1.16e-15 | 24 |
simple columnar epithelium | 3.82e-13 | 11 |
digestive system | 4.81e-10 | 116 |
digestive tract | 4.81e-10 | 116 |
primitive gut | 4.81e-10 | 116 |
endoderm-derived structure | 9.61e-10 | 118 |
endoderm | 9.61e-10 | 118 |
presumptive endoderm | 9.61e-10 | 118 |
small intestine | 2.88e-09 | 4 |
subdivision of digestive tract | 1.33e-08 | 114 |
ileal mucosa | 2.81e-07 | 3 |
ileum | 2.81e-07 | 3 |
mucosa of small intestine | 2.81e-07 | 3 |
wall of small intestine | 2.81e-07 | 3 |