FFCP PHASE1:Mm9::chr17:11032972..11032986,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:11032972..11032986,- to FFCP PHASE1:Mm9::chr17:11032972..11032986,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69310 | |EntrezGene=69310 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q0VB91,Q3UXK4,Q9DAK2 | |UniProt=Q0VB91,Q3UXK4,Q9DAK2 | ||
|association_with_transcript=70bp_to_NM_027032,uc008akg.1_5end | |||
|cluster_id=chr17:11032972..11032986,- | |||
|description=CAGE_peak_2_at_Pacrg_5end | |||
|id=chr17:11032972..11032986,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,6.37e-09,8;CL:0000333,5.54e-07,10;CL:0000095,5.54e-07,10;CL:0000243,5.54e-07,10;CL:0000123,5.54e-07,10;CL:0000125,5.54e-07,10;CL:0000030,5.54e-07,10;CL:0000339,5.54e-07,10;CL:0002612,6.79e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.75e-12!71;UBERON:0003075!9.75e-12!71;UBERON:0007284!9.75e-12!71;UBERON:0001049!1.27e-10!52;UBERON:0005068!1.27e-10!52;UBERON:0006241!1.27e-10!52;UBERON:0007135!1.27e-10!52;UBERON:0001017!1.05e-09!73;UBERON:0005743!1.05e-09!73;UBERON:0000073!4.00e-09!75;UBERON:0001016!4.00e-09!75;UBERON:0004121!5.11e-09!102;UBERON:0000924!5.11e-09!102;UBERON:0006601!5.11e-09!102;UBERON:0000033!5.19e-09!63;UBERON:0003056!2.04e-08!49;UBERON:0000955!8.89e-08!50;UBERON:0006238!8.89e-08!50;UBERON:0002616!9.98e-08!49;UBERON:0003080!5.51e-07!40;UBERON:0002780!5.64e-07!39;UBERON:0001890!5.64e-07!39;UBERON:0006240!5.64e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.52e-10,8;UBERON:0003296,6.52e-10,8;UBERON:0010133,6.52e-10,8;UBERON:0001049,9.55e-09,52;UBERON:0005068,9.55e-09,52;UBERON:0006241,9.55e-09,52;UBERON:0007135,9.55e-09,52;UBERON:0001017,1.22e-08,73;UBERON:0001016,2.86e-08,75;UBERON:0000073,2.89e-08,54;UBERON:0002346,3.34e-08,64;UBERON:0003075,3.34e-08,64;UBERON:0007284,3.34e-08,64;UBERON:0001894,9.45e-08,10;UBERON:0006222,9.45e-08,10;UBERON:0004121,6.13e-07,95;UBERON:0000924,6.13e-07,95;UBERON:0006601,6.13e-07,95;UBERON:0002257,6.79e-07,3;UBERON:0001948,8.50e-07,5;UBERON:0002315,8.50e-07,5 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14363637268986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.5378032791413,1.1665793944457,0.699932108126813,1.43752564364972,0,0,0,0,0,0,1.82084814773638,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,1.49800055259202,3.07374644257244,0.207379224616955,0,0.210324961351382,0.571301968807607,1.32521124570968,0.367472397644862,0.0958454710182364,0,0,0.255374676170375,0.614426133024974,1.58263545276233,0.823388792421687,0.52091337055676,0.558365998002762,0.56276261003168,1.22238598221448,2.06240009831567,2.13557521198654,1.1183966749518,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,0.842666520790511,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0.91347103775248,0,1.03909497345377,0.520455980298408,0.304465478312141,0.461230994512117,0,0.705532242814229,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,0.915001205637253,0.879580464790051,1.04294592115366,0,0.62336413367868,0.648965052271031,0.101839363850316,0.124406970610093,0,0.631325567659422,1.04096354370163,0.229902104433473,0,0.30140963567143,0.748401490664606,0.896796041993948,0.468508622798644,2.06962696591213,0.215567992932842,0,0.527853372491847,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.621377317606506,0.703578179943289,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.930135779001631,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0.292399974850665,0.658650345873152,0.268412837520744,1.26173969138476,0.823236899034275,0.330418782983798,0,0,0.232236671860439,0.515469845288373,0.201683524623343,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.114248512609729,0,0.407302655690628,0.387904974335251,0.561086559122548,0.442655759869801,0.295220295959204,0.31399745568275,0.493588655687202,0,0,0,0.224862112384854,0,0,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,1.29327233116623,0,0.488894929326078,0.169745085775188,1.87752198630802,0.837531287209079,0.952174563544055,1.95133647857799,1.41871629695572,0.8858587585951,0.318909537314974,1.14704320301017,0.690739927463582,0.578596234326046,0,0,0,0,0.963303539926752,0.937693492737625,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0.162886959353576,0.659880491890142,0,0.485561272309963,0.302323556964751,1.32023555829129,1.18120757152309,1.84461088766356,1.03371317267288,0.727067458955011,0,0,1.05418608574999,0,2.7235168460303,0.36012218806262,0.905510786479282,2.14337035031592,3.54680467284547,1.42695054081656,2.13913726782757,3.65357938937519,0.23467170806371,0.21183207086382,0.220528398054962,0,0.322928853391811,0.120625849856312,0,0,0,0.927126510052548,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0.552799895217695,0,0.316335993581135,0.203319467126849,0.324016022465404,0.418176592028937,0,0.134864346384821,0.330613822901344,0,0.259229946583586,0,62.5699161939451,0.299033092087958,0.165458490457098,1.16670713006429,0.774958940866387,0.844780627453891,1.17357238645754,0.13020438484395,0.734015410979976,9.66336483304024,18.4339204005034,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0.201932899896295,0.0762068066549998,0,0,0.192423683280659,0.116876902181569,0,0,0.0897138566094757,0,0.386379188064381,0,0,0.214368379079066,1.50471631210609,0.564751842617067,0,0,0.515559547031063,0,0,0.675022500231806,1.35096360967266,0.453142408984205,0,0.518936737920883,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,1.26348605881899,0.50695859978048,0.943131706930381,0.842773567228942,0.448176066834085,0.459483751644906,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.883193520806384,0.685738504770831,0.887379030796687,0.715308569841963,0.581385666529314,0.564656282491984,0.676916863133412,1.46342378298218,0.526139422875686,0.814824683075171,0,0.593175090620871,0.394017929502254,0.409231043169689,0.464810523557898,0.771626443924566,0.249810577937946,0.701794825336225,0.429742108096597,0.382576664137687,0,0.463735671240843 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14363637268986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.5378032791413,1.1665793944457,0.699932108126813,1.43752564364972,0,0,0,0,0,0,1.82084814773638,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,1.49800055259202,3.07374644257244,0.207379224616955,0,0.210324961351382,0.571301968807607,1.32521124570968,0.367472397644862,0.0958454710182364,0,0,0.255374676170375,0.614426133024974,1.58263545276233,0.823388792421687,0.52091337055676,0.558365998002762,0.56276261003168,1.22238598221448,2.06240009831567,2.13557521198654,1.1183966749518,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,0.842666520790511,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0.91347103775248,0,1.03909497345377,0.520455980298408,0.304465478312141,0.461230994512117,0,0.705532242814229,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,0.915001205637253,0.879580464790051,1.04294592115366,0,0.62336413367868,0.648965052271031,0.101839363850316,0.124406970610093,0,0.631325567659422,1.04096354370163,0.229902104433473,0,0.30140963567143,0.748401490664606,0.896796041993948,0.468508622798644,2.06962696591213,0.215567992932842,0,0.527853372491847,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.621377317606506,0.703578179943289,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.930135779001631,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0.292399974850665,0.658650345873152,0.268412837520744,1.26173969138476,0.823236899034275,0.330418782983798,0,0,0.232236671860439,0.515469845288373,0.201683524623343,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.114248512609729,0,0.407302655690628,0.387904974335251,0.561086559122548,0.442655759869801,0.295220295959204,0.31399745568275,0.493588655687202,0,0,0,0.224862112384854,0,0,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,1.29327233116623,0,0.488894929326078,0.169745085775188,1.87752198630802,0.837531287209079,0.952174563544055,1.95133647857799,1.41871629695572,0.8858587585951,0.318909537314974,1.14704320301017,0.690739927463582,0.578596234326046,0,0,0,0,0.963303539926752,0.937693492737625,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0.162886959353576,0.659880491890142,0,0.485561272309963,0.302323556964751,1.32023555829129,1.18120757152309,1.84461088766356,1.03371317267288,0.727067458955011,0,0,1.05418608574999,0,2.7235168460303,0.36012218806262,0.905510786479282,2.14337035031592,3.54680467284547,1.42695054081656,2.13913726782757,3.65357938937519,0.23467170806371,0.21183207086382,0.220528398054962,0,0.322928853391811,0.120625849856312,0,0,0,0.927126510052548,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0.552799895217695,0,0.316335993581135,0.203319467126849,0.324016022465404,0.418176592028937,0,0.134864346384821,0.330613822901344,0,0.259229946583586,0,62.5699161939451,0.299033092087958,0.165458490457098,1.16670713006429,0.774958940866387,0.844780627453891,1.17357238645754,0.13020438484395,0.734015410979976,9.66336483304024,18.4339204005034,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0.201932899896295,0.0762068066549998,0,0,0.192423683280659,0.116876902181569,0,0,0.0897138566094757,0,0.386379188064381,0,0,0.214368379079066,1.50471631210609,0.564751842617067,0,0,0.515559547031063,0,0,0.675022500231806,1.35096360967266,0.453142408984205,0,0.518936737920883,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,1.26348605881899,0.50695859978048,0.943131706930381,0.842773567228942,0.448176066834085,0.459483751644906,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.883193520806384,0.685738504770831,0.887379030796687,0.715308569841963,0.581385666529314,0.564656282491984,0.676916863133412,1.46342378298218,0.526139422875686,0.814824683075171,0,0.593175090620871,0.394017929502254,0.409231043169689,0.464810523557898,0.771626443924566,0.249810577937946,0.701794825336225,0.429742108096597,0.382576664137687,0,0.463735671240843 | ||
|short_description=p2@Pacrg | |||
}} | }} |
Latest revision as of 22:50, 25 September 2015
Short description: | p2@Pacrg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pacrg_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 70bp_to_NM_027032, uc008akg.1_5end |
EntrezGene: | Pacrg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 6.37e-09 | 8 |
migratory neural crest cell | 5.54e-07 | 10 |
neuron associated cell | 5.54e-07 | 10 |
glial cell (sensu Vertebrata) | 5.54e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 5.54e-07 | 10 |
glial cell | 5.54e-07 | 10 |
glioblast | 5.54e-07 | 10 |
glioblast (sensu Vertebrata) | 5.54e-07 | 10 |
neuron of the ventral spinal cord | 6.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 6.52e-10 | 8 |
gland of diencephalon | 6.52e-10 | 8 |
neuroendocrine gland | 6.52e-10 | 8 |
neural tube | 9.55e-09 | 52 |
neural rod | 9.55e-09 | 52 |
future spinal cord | 9.55e-09 | 52 |
neural keel | 9.55e-09 | 52 |
central nervous system | 1.22e-08 | 73 |
nervous system | 2.86e-08 | 75 |
regional part of nervous system | 2.89e-08 | 54 |
neurectoderm | 3.34e-08 | 64 |
neural plate | 3.34e-08 | 64 |
presumptive neural plate | 3.34e-08 | 64 |
diencephalon | 9.45e-08 | 10 |
future diencephalon | 9.45e-08 | 10 |
ectoderm-derived structure | 6.13e-07 | 95 |
ectoderm | 6.13e-07 | 95 |
presumptive ectoderm | 6.13e-07 | 95 |
ventral horn of spinal cord | 6.79e-07 | 3 |
regional part of spinal cord | 8.50e-07 | 5 |
gray matter of spinal cord | 8.50e-07 | 5 |