FFCP PHASE1:Mm9::chr15:89330547..89330576,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr15:89330547..89330576,+ to FFCP PHASE1:Mm9::chr15:89330547..89330576,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=58234 | |EntrezGene=58234 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=189 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000135214_5end | |||
|cluster_id=chr15:89330547..89330576,+ | |||
|description=CAGE_peak_4_at_Shank3_5end | |||
|id=chr15:89330547..89330576,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.45e-07!23;CL:0000337!1.45e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.96e-12,23;CL:0000337,3.96e-12,23;CL:0002319,6.70e-09,43;CL:0000221,1.35e-08,44;CL:0000133,1.35e-08,44;CL:0000540,2.06e-07,33;CL:0000047,2.06e-07,33;CL:0000031,2.06e-07,33;CL:0000404,2.06e-07,33;CL:0002610,3.67e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.34e-15!52;UBERON:0005068!1.34e-15!52;UBERON:0006241!1.34e-15!52;UBERON:0007135!1.34e-15!52;UBERON:0001017!8.57e-15!73;UBERON:0005743!8.57e-15!73;UBERON:0000955!1.46e-14!50;UBERON:0006238!1.46e-14!50;UBERON:0002616!1.51e-14!49;UBERON:0000073!5.55e-14!75;UBERON:0001016!5.55e-14!75;UBERON:0002020!7.74e-14!34;UBERON:0000033!4.66e-13!63;UBERON:0002346!3.60e-12!71;UBERON:0003075!3.60e-12!71;UBERON:0007284!3.60e-12!71;UBERON:0003080!7.19e-11!40;UBERON:0002791!9.12e-11!29;UBERON:0003528!9.12e-11!29;UBERON:0001893!9.12e-11!29;UBERON:0004121!1.33e-10!102;UBERON:0000924!1.33e-10!102;UBERON:0006601!1.33e-10!102;UBERON:0002780!1.63e-10!39;UBERON:0001890!1.63e-10!39;UBERON:0006240!1.63e-10!39;UBERON:0003056!1.87e-10!49;UBERON:0000956!2.08e-08!21;UBERON:0001869!2.08e-08!21;UBERON:0000203!2.08e-08!21;UBERON:0000468!6.52e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.88e-25,54;UBERON:0002020,2.14e-21,34;UBERON:0001017,2.17e-20,73;UBERON:0001049,6.19e-20,52;UBERON:0005068,6.19e-20,52;UBERON:0006241,6.19e-20,52;UBERON:0007135,6.19e-20,52;UBERON:0001016,1.33e-19,75;UBERON:0002346,8.90e-15,64;UBERON:0003075,8.90e-15,64;UBERON:0007284,8.90e-15,64;UBERON:0003528,1.26e-14,29;UBERON:0002791,1.26e-14,29;UBERON:0001893,1.26e-14,29;UBERON:0004121,1.42e-14,95;UBERON:0000924,1.42e-14,95;UBERON:0006601,1.42e-14,95;UBERON:0002616,1.83e-14,46;UBERON:0000955,5.02e-14,47;UBERON:0006238,5.02e-14,47;UBERON:0010371,4.58e-13,73;UBERON:0002780,7.22e-13,39;UBERON:0001890,7.22e-13,39;UBERON:0006240,7.22e-13,39;UBERON:0003080,2.04e-12,40;UBERON:0001948,2.35e-09,5;UBERON:0002315,2.35e-09,5;UBERON:0000956,2.50e-09,21;UBERON:0001869,2.50e-09,21;UBERON:0000203,2.50e-09,21;UBERON:0003056,3.36e-09,49;UBERON:0003076,7.58e-09,12;UBERON:0003057,7.58e-09,12;UBERON:0002619,2.12e-08,17;UBERON:0000369,2.70e-08,5;UBERON:0002435,2.70e-08,5;UBERON:0000204,2.70e-08,5;UBERON:0010082,2.70e-08,5;UBERON:0010314,4.31e-08,92;UBERON:0002021,7.23e-08,10;UBERON:0000411,7.23e-08,10;UBERON:0001950,7.23e-08,10;UBERON:0002240,1.05e-07,6;UBERON:0005174,1.05e-07,6;UBERON:0001137,1.05e-07,6;UBERON:0002106,2.21e-07,6;UBERON:0004457,2.21e-07,6;UBERON:0000042,2.21e-07,6;UBERON:0004854,2.21e-07,6;UBERON:0009034,2.21e-07,6;UBERON:0002095,2.21e-07,6;UBERON:0004782,2.21e-07,6;UBERON:0003281,2.21e-07,6;UBERON:0009664,2.21e-07,6;UBERON:0002296,2.21e-07,6;UBERON:0005602,2.21e-07,6;UBERON:0001179,2.21e-07,6;UBERON:0006293,2.21e-07,6;UBERON:0004684,3.67e-07,3;UBERON:0002275,3.67e-07,3;UBERON:0002420,8.28e-07,8;UBERON:0007245,8.28e-07,8;UBERON:0010009,8.28e-07,8;UBERON:0010011,8.28e-07,8;UBERON:0000454,8.28e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3297561890506,2.22722794128809,0.699561878128147,0.157731082679119,0.274228867211478,0.84877930359606,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,1.56478268869608,0.218025156380447,1.5378032791413,0.388859798148567,0.279972843250725,0,0,0,0,0,0.286533439938757,0,1.61853168687678,0,0.633831403506179,0.338844532069132,0,0,0,0,1.49800055259202,1.53687322128622,1.14058573539325,0.945041568321835,0.841299845405528,5.71301968807607,2.20868540951614,0.734944795289724,0.191690942036473,0,14.3150645299205,17.2377906415003,10.1380311949121,1.71452174049252,1.00636407962651,1.56274011167028,0,0.56276261003168,1.06958773443767,2.94628585473668,1.85083185038834,1.4911955666024,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0,0.587943535678524,0,0.247194967734374,0.289198713839823,0.884610551949874,0.647067399789637,0.441683036920787,0.969750506270444,0,3.51336956413857,2.93225389538837,0.255457055208591,0,0,0,0.898743836428936,3.20250421973039,1.38219787324151,2.08589184230732,1.53429274398198,13.0906468072523,8.59878694259116,0.101839363850316,0.995255764880744,0,0,0.260240885925407,0.689706313300419,0.180062129805349,0.60281927134286,0.408218994907967,0.512454881139399,0.187403449119458,0.258703370739016,1.5089759505299,1.89106080167819,0.879755620819744,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,1.47202963994889,1.64647379806855,0,0.264450566663544,0.213288250535234,0.464473343720877,0,0.201683524623343,0,0.380451252225118,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0.569003702859245,0.456994050438915,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0,0.156998727841375,0,0,0.667380422864376,1.17935397067922,0.899448449539415,0.811440485554012,0.241177159752417,0.50925170356284,0.863088412352432,0.486405680325106,0,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0.651859905768103,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0.757412781613119,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.425820255624806,0.534196811001766,0.81443479676788,0.164970122972535,0,0,0.604647113929502,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,0,0.900305470156551,0.129358683782755,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,1.13025098687134,0.120625849856312,0.119372344003136,0,0.291480836629851,0.370850604021019,2.05045056957423,0.412773735926445,1.66675074632741,1.31857919903284,2.1871076435364,2.97411625168479,0,0,0,0,0.474503990371703,0.813277868507395,0.324016022465404,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,1.16670713006429,1.03327858782185,0.506868376472335,0.352071715937262,0.5208175393758,0.629156066554265,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0.443971906748129,0,0,0,0,0,0,0,3.95326289831947,2.76195141904306,1.14579102687879,4.64003592327956,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,0.906284817968409,2.07104124700728,0.830298780673413,1.19707462020309,0.341467211508268,0.243106717068294,0.419226325255965,1.47074806760011,0.888986911206461,0.618105171716683,0.962757628775446,0.252697211763798,0,0.188626341386076,0.561849044819294,0.320125762024346,0.459483751644906,0.952587382566147,0.811190281613988,0.964546102318525,1.23625770240992,1.47198920134397,0.685738504770831,0.887379030796687,0.238436189947321,0.726732083161643,0.376437521661322,0.676916863133412,0.914639864363863,0.789209134313529,0.814824683075171,0.561142271657738,0.949080144993393,0.591026894253381,0.409231043169689,0.154936841185966,0.385813221962283,0.999242311751784,0,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421 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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3297561890506,2.22722794128809,0.699561878128147,0.157731082679119,0.274228867211478,0.84877930359606,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,1.56478268869608,0.218025156380447,1.5378032791413,0.388859798148567,0.279972843250725,0,0,0,0,0,0.286533439938757,0,1.61853168687678,0,0.633831403506179,0.338844532069132,0,0,0,0,1.49800055259202,1.53687322128622,1.14058573539325,0.945041568321835,0.841299845405528,5.71301968807607,2.20868540951614,0.734944795289724,0.191690942036473,0,14.3150645299205,17.2377906415003,10.1380311949121,1.71452174049252,1.00636407962651,1.56274011167028,0,0.56276261003168,1.06958773443767,2.94628585473668,1.85083185038834,1.4911955666024,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0,0.587943535678524,0,0.247194967734374,0.289198713839823,0.884610551949874,0.647067399789637,0.441683036920787,0.969750506270444,0,3.51336956413857,2.93225389538837,0.255457055208591,0,0,0,0.898743836428936,3.20250421973039,1.38219787324151,2.08589184230732,1.53429274398198,13.0906468072523,8.59878694259116,0.101839363850316,0.995255764880744,0,0,0.260240885925407,0.689706313300419,0.180062129805349,0.60281927134286,0.408218994907967,0.512454881139399,0.187403449119458,0.258703370739016,1.5089759505299,1.89106080167819,0.879755620819744,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,1.47202963994889,1.64647379806855,0,0.264450566663544,0.213288250535234,0.464473343720877,0,0.201683524623343,0,0.380451252225118,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0.569003702859245,0.456994050438915,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0,0.156998727841375,0,0,0.667380422864376,1.17935397067922,0.899448449539415,0.811440485554012,0.241177159752417,0.50925170356284,0.863088412352432,0.486405680325106,0,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0.651859905768103,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0.757412781613119,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.425820255624806,0.534196811001766,0.81443479676788,0.164970122972535,0,0,0.604647113929502,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,0,0.900305470156551,0.129358683782755,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,1.13025098687134,0.120625849856312,0.119372344003136,0,0.291480836629851,0.370850604021019,2.05045056957423,0.412773735926445,1.66675074632741,1.31857919903284,2.1871076435364,2.97411625168479,0,0,0,0,0.474503990371703,0.813277868507395,0.324016022465404,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,1.16670713006429,1.03327858782185,0.506868376472335,0.352071715937262,0.5208175393758,0.629156066554265,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0.443971906748129,0,0,0,0,0,0,0,3.95326289831947,2.76195141904306,1.14579102687879,4.64003592327956,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,0.906284817968409,2.07104124700728,0.830298780673413,1.19707462020309,0.341467211508268,0.243106717068294,0.419226325255965,1.47074806760011,0.888986911206461,0.618105171716683,0.962757628775446,0.252697211763798,0,0.188626341386076,0.561849044819294,0.320125762024346,0.459483751644906,0.952587382566147,0.811190281613988,0.964546102318525,1.23625770240992,1.47198920134397,0.685738504770831,0.887379030796687,0.238436189947321,0.726732083161643,0.376437521661322,0.676916863133412,0.914639864363863,0.789209134313529,0.814824683075171,0.561142271657738,0.949080144993393,0.591026894253381,0.409231043169689,0.154936841185966,0.385813221962283,0.999242311751784,0,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421 | ||
|short_description=p4@Shank3 | |||
}} | }} |
Latest revision as of 07:44, 27 September 2015
Short description: | p4@Shank3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Shank3_5end |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | 0bp_to_ENSMUST00000135214_5end |
EntrezGene: | Shank3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.96e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.96e-12 | 23 |
neural cell | 6.70e-09 | 43 |
ectodermal cell | 1.35e-08 | 44 |
neurectodermal cell | 1.35e-08 | 44 |
neuron | 2.06e-07 | 33 |
neuronal stem cell | 2.06e-07 | 33 |
neuroblast | 2.06e-07 | 33 |
electrically signaling cell | 2.06e-07 | 33 |
raphe nuclei neuron | 3.67e-07 | 3 |