FFCP PHASE1:Mm9::chr13:32430423..32430433,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr13:32430423..32430433,- to FFCP PHASE1:Mm9::chr13:32430423..32430433,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=218138 | |EntrezGene=218138 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=395 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K0C9 | |UniProt=Q8K0C9 | ||
|association_with_transcript=-10bp_to_NM_146041,uc007pzq.1,uc007pzr.1_5end | |||
|cluster_id=chr13:32430423..32430433,- | |||
|description=CAGE_peak_4_at_Gmds_5end | |||
|id=chr13:32430423..32430433,- | |||
|ontology_enrichment_celltype=CL:0002563!2.63e-07!9;CL:0002251!2.63e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.44e-16,9;CL:0002251,3.44e-16,9;CL:0002076,6.09e-13,15;CL:0000066,1.10e-11,25;CL:0000239,1.50e-11,6;CL:0000677,1.50e-11,6;CL:0000584,1.50e-11,6;CL:0000075,9.39e-10,7;CL:0000223,5.03e-09,20;CL:0000682,9.65e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.92e-16!59;UBERON:0000160!4.49e-15!43;UBERON:0000344!3.84e-11!15;UBERON:0001242!6.60e-10!13;UBERON:0000060!6.60e-10!13;UBERON:0001262!6.60e-10!13;UBERON:0004786!6.60e-10!13;UBERON:0003350!2.63e-07!9;UBERON:0004808!2.63e-07!9;UBERON:0001277!2.63e-07!9;UBERON:0004923!6.13e-07!24;UBERON:0000485!8.70e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.79e-39,31;UBERON:0005409,2.54e-38,47;UBERON:0000344,5.91e-26,15;UBERON:0001242,8.42e-23,13;UBERON:0001262,8.42e-23,13;UBERON:0004786,8.42e-23,13;UBERON:0003350,3.44e-16,9;UBERON:0004808,3.44e-16,9;UBERON:0001277,3.44e-16,9;UBERON:0001007,8.55e-15,116;UBERON:0001555,8.55e-15,116;UBERON:0007026,8.55e-15,116;UBERON:0004923,1.34e-14,24;UBERON:0004119,2.27e-14,118;UBERON:0000925,2.27e-14,118;UBERON:0006595,2.27e-14,118;UBERON:0004921,4.88e-13,114;UBERON:0000485,7.51e-13,11;UBERON:0002108,3.38e-08,4;UBERON:0000331,5.09e-07,3;UBERON:0002116,5.09e-07,3;UBERON:0001204,5.09e-07,3;UBERON:0001168,5.09e-07,3 | |||
|phase1_expression=0.320297694209588,7.32848356042658,5.45999087267443,3.0246421130683,7.51343594919521,6.88305014838748,5.37309073369709,0,0.281577444303333,0.234064526321993,0,0.319088635981346,0,0,0,0,0,0,0.548457734422955,0,0.680346321208558,0.0992909512008853,0,3.99981056983517,3.67054849707472,5.7423196411502,8.61523992318149,5.60225204983311,9.88121781173144,7.30887376303799,10.199603490144,0,0,0,4.04392267651784,4.65457007003779,3.47087905646027,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.436050312760893,0.439372365468944,0,0.279972843250725,1.43752564364972,0,0.725362142011344,0,0.257259436035947,0,0,0.202316460859598,0,1.26766280701236,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0.420649922702764,0.285650984403804,0,0,0.191690942036473,0,0,0.255374676170375,0,0.131886287730194,0.182975287204819,1.04182674111352,0,0,0.30559649555362,0,0.284743361598206,0.372798891650601,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0.421333260395256,0.511290967734173,0,1.41335829804136,0.281686839553361,1.28326477414318,2.54805239706646,0,0,0,0,1.1418387971906,0.517875767294343,0,0.520455980298408,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.741584903203122,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,9.31958806090611,0.585561594023094,0.209446706813455,5.10914110417183,0.479260498023681,0.599902730993408,0.127070227073065,0.299581278809645,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.497627882440372,0.252722758433675,0,0.650602214813519,0.229902104433473,0.360124259610698,0,0.204109497453984,0.384341160854549,0,0,0.215567992932842,0.945530400839096,0.351902248327898,0.876782929710299,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0.51469581422943,0.568326998791185,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.0810688095458557,0,0,0,0,0.102904612379284,1.32167513193519,6.34681359992506,0.639864751605702,0.232236671860439,1.15980715189884,1.21010114774006,2.00140239460383,2.09248188723815,2.37264530772256,1.81168850196412,0.502670417600539,1.98956472041151,1.55971269695296,3.59527763461689,3.45820879799511,2.78797782556114,0.569003702859245,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.316182685621286,0,0.31399745568275,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0,0,0,0,0,0,0,0.54390568381871,0.983528546038072,0.827810238914197,0,0.234423373184406,0.655739781506702,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0,0.851640511249612,0.35613120733451,0.162886959353576,0.659880491890142,0,0.485561272309963,0,0.943025398779491,0,0.307435147943927,1.03371317267288,0.363533729477506,0,1.8962205476149,2.10837217149998,0,0.680879211507576,0.540183282093931,0.905510786479282,1.28602221018955,0.354680467284547,0.535106452806212,0.987294123612726,0,0,0.21183207086382,1.98475558249466,0.16488625294148,0,0.180938774784468,0.119372344003136,0.328281799490123,1.7488850197791,0.18542530201051,0.170870880797853,0.412773735926445,0.185194527369712,0,0.27338845544205,0,0,0.419854356970974,0.690999869022119,3.81868247206045,0,0.406638934253697,1.18805874903981,1.04544148007234,1.9652630737156,0.809186078308924,1.48776220305605,3.40282724579238,4.92536898508813,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0.483168241652012,0.288030006257865,0.632022241256357,0.202725215290164,0.308132871494482,0.25984164595559,0.716106782669926,0.79472541912506,0,0.295379054349154,0.201932899896295,0.304827226619999,0.504130925684203,0.292373642219257,0.288635524920988,0.467507608726276,0.680191150845634,0,0.0897138566094757,0,0,1.50145980360946,2.38097111547445,0.643105137237198,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0.486213434136588,1.25767897576789,0.183843508450014,0,0.412070114477788,0.320919209591815,0.252697211763798,0,0,0.561849044819294,0.256100609619477,0.34461281373368,0.476293691283074,0.231768651889711,0.77163688185482,0.412085900803307,0,0.342869252385415,0.532427418478012,0.238436189947321,0,0.376437521661322,0.507687647350059,0.182927972872773,0,0,0,0.355905054372522,0.29551344712669,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.320297694209588,7.32848356042658,5.45999087267443,3.0246421130683,7.51343594919521,6.88305014838748,5.37309073369709,0,0.281577444303333,0.234064526321993,0,0.319088635981346,0,0,0,0,0,0,0.548457734422955,0,0.680346321208558,0.0992909512008853,0,3.99981056983517,3.67054849707472,5.7423196411502,8.61523992318149,5.60225204983311,9.88121781173144,7.30887376303799,10.199603490144,0,0,0,4.04392267651784,4.65457007003779,3.47087905646027,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.436050312760893,0.439372365468944,0,0.279972843250725,1.43752564364972,0,0.725362142011344,0,0.257259436035947,0,0,0.202316460859598,0,1.26766280701236,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0.420649922702764,0.285650984403804,0,0,0.191690942036473,0,0,0.255374676170375,0,0.131886287730194,0.182975287204819,1.04182674111352,0,0,0.30559649555362,0,0.284743361598206,0.372798891650601,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0.421333260395256,0.511290967734173,0,1.41335829804136,0.281686839553361,1.28326477414318,2.54805239706646,0,0,0,0,1.1418387971906,0.517875767294343,0,0.520455980298408,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.741584903203122,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,9.31958806090611,0.585561594023094,0.209446706813455,5.10914110417183,0.479260498023681,0.599902730993408,0.127070227073065,0.299581278809645,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.497627882440372,0.252722758433675,0,0.650602214813519,0.229902104433473,0.360124259610698,0,0.204109497453984,0.384341160854549,0,0,0.215567992932842,0.945530400839096,0.351902248327898,0.876782929710299,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0.51469581422943,0.568326998791185,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.0810688095458557,0,0,0,0,0.102904612379284,1.32167513193519,6.34681359992506,0.639864751605702,0.232236671860439,1.15980715189884,1.21010114774006,2.00140239460383,2.09248188723815,2.37264530772256,1.81168850196412,0.502670417600539,1.98956472041151,1.55971269695296,3.59527763461689,3.45820879799511,2.78797782556114,0.569003702859245,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.316182685621286,0,0.31399745568275,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0,0,0,0,0,0,0,0.54390568381871,0.983528546038072,0.827810238914197,0,0.234423373184406,0.655739781506702,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0,0.851640511249612,0.35613120733451,0.162886959353576,0.659880491890142,0,0.485561272309963,0,0.943025398779491,0,0.307435147943927,1.03371317267288,0.363533729477506,0,1.8962205476149,2.10837217149998,0,0.680879211507576,0.540183282093931,0.905510786479282,1.28602221018955,0.354680467284547,0.535106452806212,0.987294123612726,0,0,0.21183207086382,1.98475558249466,0.16488625294148,0,0.180938774784468,0.119372344003136,0.328281799490123,1.7488850197791,0.18542530201051,0.170870880797853,0.412773735926445,0.185194527369712,0,0.27338845544205,0,0,0.419854356970974,0.690999869022119,3.81868247206045,0,0.406638934253697,1.18805874903981,1.04544148007234,1.9652630737156,0.809186078308924,1.48776220305605,3.40282724579238,4.92536898508813,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0.483168241652012,0.288030006257865,0.632022241256357,0.202725215290164,0.308132871494482,0.25984164595559,0.716106782669926,0.79472541912506,0,0.295379054349154,0.201932899896295,0.304827226619999,0.504130925684203,0.292373642219257,0.288635524920988,0.467507608726276,0.680191150845634,0,0.0897138566094757,0,0,1.50145980360946,2.38097111547445,0.643105137237198,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0.486213434136588,1.25767897576789,0.183843508450014,0,0.412070114477788,0.320919209591815,0.252697211763798,0,0,0.561849044819294,0.256100609619477,0.34461281373368,0.476293691283074,0.231768651889711,0.77163688185482,0.412085900803307,0,0.342869252385415,0.532427418478012,0.238436189947321,0,0.376437521661322,0.507687647350059,0.182927972872773,0,0,0,0.355905054372522,0.29551344712669,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | ||
|short_description=p4@Gmds | |||
}} | }} |
Latest revision as of 12:34, 1 October 2015
Short description: | p4@Gmds |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gmds_5end |
Coexpression cluster: | MCL_coexpression_mm9:395 |
Association with transcript: | -10bp_to_NM_146041, uc007pzq.1, uc007pzr.1_5end |
EntrezGene: | Gmds |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.44e-16 | 9 |
epithelial cell of alimentary canal | 3.44e-16 | 9 |
endo-epithelial cell | 6.09e-13 | 15 |
epithelial cell | 1.10e-11 | 25 |
brush border epithelial cell | 1.50e-11 | 6 |
gut absorptive cell | 1.50e-11 | 6 |
enterocyte | 1.50e-11 | 6 |
columnar/cuboidal epithelial cell | 9.39e-10 | 7 |
endodermal cell | 5.03e-09 | 20 |
M cell of gut | 9.65e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.79e-39 | 31 |
gastrointestinal system | 2.54e-38 | 47 |
mucosa | 5.91e-26 | 15 |
intestinal mucosa | 8.42e-23 | 13 |
wall of intestine | 8.42e-23 | 13 |
gastrointestinal system mucosa | 8.42e-23 | 13 |
epithelium of mucosa | 3.44e-16 | 9 |
gastrointestinal system epithelium | 3.44e-16 | 9 |
intestinal epithelium | 3.44e-16 | 9 |
digestive system | 8.55e-15 | 116 |
digestive tract | 8.55e-15 | 116 |
primitive gut | 8.55e-15 | 116 |
organ component layer | 1.34e-14 | 24 |
endoderm-derived structure | 2.27e-14 | 118 |
endoderm | 2.27e-14 | 118 |
presumptive endoderm | 2.27e-14 | 118 |
subdivision of digestive tract | 4.88e-13 | 114 |
simple columnar epithelium | 7.51e-13 | 11 |
small intestine | 3.38e-08 | 4 |
ileal mucosa | 5.09e-07 | 3 |
ileum | 5.09e-07 | 3 |
mucosa of small intestine | 5.09e-07 | 3 |
wall of small intestine | 5.09e-07 | 3 |