FFCP PHASE1:Mm9::chr12:47919328..47919344,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:47919328..47919344,- to FFCP PHASE1:Mm9::chr12:47919328..47919344,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:47919328..47919344,- | |||
|description=CAGE_peak_at_chr12:47919328..47919344,- | |||
|id=chr12:47919328..47919344,- | |||
|ontology_enrichment_celltype=CL:0000117!3.58e-17!23;CL:0000337!3.58e-17!23;CL:0000540!3.95e-10!33;CL:0000047!3.95e-10!33;CL:0000031!3.95e-10!33;CL:0000404!3.95e-10!33;CL:0000393!1.04e-07!39;CL:0000211!1.04e-07!39;CL:0002319!2.08e-07!43;CL:0000221!4.11e-07!44;CL:0000133!4.11e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.55e-42,23;CL:0000337,2.55e-42,23;CL:0000540,1.69e-28,33;CL:0000047,1.69e-28,33;CL:0000031,1.69e-28,33;CL:0000404,1.69e-28,33;CL:0000393,1.33e-23,39;CL:0000211,1.33e-23,39;CL:0002319,4.27e-21,43;CL:0000221,1.53e-20,44;CL:0000133,1.53e-20,44;CL:0002612,3.63e-12,3;CL:0000120,7.63e-12,3;CL:0002613,7.63e-12,3;CL:0002321,1.17e-11,70;CL:0002610,4.14e-11,3;CL:0002614,1.56e-10,3;CL:0000723,3.48e-08,91;CL:0000048,3.48e-08,91;CL:0002611,4.00e-08,2;CL:0000034,1.81e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.70e-12!73;UBERON:0005743!9.70e-12!73;UBERON:0000073!3.71e-11!75;UBERON:0001016!3.71e-11!75;UBERON:0001049!1.04e-10!52;UBERON:0005068!1.04e-10!52;UBERON:0006241!1.04e-10!52;UBERON:0007135!1.04e-10!52;UBERON:0002420!1.11e-10!8;UBERON:0007245!1.11e-10!8;UBERON:0010009!1.11e-10!8;UBERON:0010011!1.11e-10!8;UBERON:0000454!1.11e-10!8;UBERON:0002240!4.37e-09!6;UBERON:0005174!4.37e-09!6;UBERON:0001137!4.37e-09!6;UBERON:0002616!2.80e-08!49;UBERON:0002020!3.47e-08!34;UBERON:0003076!3.92e-08!12;UBERON:0003057!3.92e-08!12;UBERON:0001948!4.31e-08!5;UBERON:0002315!4.31e-08!5;UBERON:0002298!4.80e-08!6;UBERON:0000955!5.53e-08!50;UBERON:0006238!5.53e-08!50;UBERON:0004121!5.91e-08!102;UBERON:0000924!5.91e-08!102;UBERON:0006601!5.91e-08!102;UBERON:0000369!2.92e-07!5;UBERON:0002435!2.92e-07!5;UBERON:0000204!2.92e-07!5;UBERON:0010082!2.92e-07!5;UBERON:0002346!4.04e-07!71;UBERON:0003075!4.04e-07!71;UBERON:0007284!4.04e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,2.06e-20,8;UBERON:0007245,2.06e-20,8;UBERON:0010009,2.06e-20,8;UBERON:0010011,2.06e-20,8;UBERON:0000454,2.06e-20,8;UBERON:0001948,1.23e-18,5;UBERON:0002315,1.23e-18,5;UBERON:0002240,1.72e-15,6;UBERON:0005174,1.72e-15,6;UBERON:0001137,1.72e-15,6;UBERON:0001017,4.67e-14,73;UBERON:0000073,1.14e-13,54;UBERON:0001016,1.39e-13,75;UBERON:0002020,6.51e-13,34;UBERON:0002257,3.63e-12,3;UBERON:0000369,1.19e-11,5;UBERON:0002435,1.19e-11,5;UBERON:0000204,1.19e-11,5;UBERON:0010082,1.19e-11,5;UBERON:0004684,4.14e-11,3;UBERON:0002275,4.14e-11,3;UBERON:0002038,1.56e-10,3;UBERON:0009663,1.56e-10,3;UBERON:0009661,1.56e-10,3;UBERON:0000125,1.56e-10,3;UBERON:0002308,1.56e-10,3;UBERON:0003076,1.97e-10,12;UBERON:0003057,1.97e-10,12;UBERON:0004121,6.12e-10,95;UBERON:0000924,6.12e-10,95;UBERON:0006601,6.12e-10,95;UBERON:0001049,4.80e-09,52;UBERON:0005068,4.80e-09,52;UBERON:0006241,4.80e-09,52;UBERON:0007135,4.80e-09,52;UBERON:0002256,4.00e-08,2;UBERON:0002950,5.11e-08,4;UBERON:0001891,5.11e-08,4;UBERON:0009616,5.11e-08,4;UBERON:0010286,5.11e-08,4;UBERON:0002346,6.89e-07,64;UBERON:0003075,6.89e-07,64;UBERON:0007284,6.89e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65327859977075,8.99284664762456,5.07065122804943,0,0,0,0,0,0,0.768436610643109,0,0,0,3.71346279724945,3.97563373712904,0.244981598429908,0,0,2.20231761998777,2.17068474744819,2.30409799884365,6.85808696197008,5.48925861614458,5.73004707612436,1.95428099300967,1.12552522006336,1.5279824777681,7.07108605136802,7.26095572075425,6.89677949553612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.898743836428936,0.457500602818626,1.00523481690292,0.173824320192276,0,0.62336413367868,0.973447578406546,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.49465875882444,0.161464426695906,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0,1.59609949360412,0.341467211508268,0.729320151204882,0.419226325255965,0.367687016900028,1.11123363900808,1.23621034343337,0.962757628775446,1.26348605881899,0.760437899670719,0.188626341386076,0.280924522409647,0.640251524048693,0.689225627467359,0,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,1.24233064311536,1.43061713968393,0.290692833264657,0.658765662907314,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.619747364743864,0.578719832943424,1.49886346762768,0.467863216890817,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65327859977075,8.99284664762456,5.07065122804943,0,0,0,0,0,0,0.768436610643109,0,0,0,3.71346279724945,3.97563373712904,0.244981598429908,0,0,2.20231761998777,2.17068474744819,2.30409799884365,6.85808696197008,5.48925861614458,5.73004707612436,1.95428099300967,1.12552522006336,1.5279824777681,7.07108605136802,7.26095572075425,6.89677949553612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.898743836428936,0.457500602818626,1.00523481690292,0.173824320192276,0,0.62336413367868,0.973447578406546,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.49465875882444,0.161464426695906,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0,1.59609949360412,0.341467211508268,0.729320151204882,0.419226325255965,0.367687016900028,1.11123363900808,1.23621034343337,0.962757628775446,1.26348605881899,0.760437899670719,0.188626341386076,0.280924522409647,0.640251524048693,0.689225627467359,0,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,1.24233064311536,1.43061713968393,0.290692833264657,0.658765662907314,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.619747364743864,0.578719832943424,1.49886346762768,0.467863216890817,0.429742108096597,0,0,0 | ||
|short_description=p@chr12:47919328..47919344,- | |||
}} | }} |
Latest revision as of 01:44, 5 August 2015
Short description: | p@chr12:47919328..47919344, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:47919328..47919344, - |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.55e-42 | 23 |
neuroblast (sensu Vertebrata) | 2.55e-42 | 23 |
neuron | 1.69e-28 | 33 |
neuronal stem cell | 1.69e-28 | 33 |
neuroblast | 1.69e-28 | 33 |
electrically signaling cell | 1.69e-28 | 33 |
electrically responsive cell | 1.33e-23 | 39 |
electrically active cell | 1.33e-23 | 39 |
neural cell | 4.27e-21 | 43 |
ectodermal cell | 1.53e-20 | 44 |
neurectodermal cell | 1.53e-20 | 44 |
neuron of the ventral spinal cord | 3.63e-12 | 3 |
granule cell | 7.63e-12 | 3 |
striatum neuron | 7.63e-12 | 3 |
embryonic cell | 1.17e-11 | 70 |
raphe nuclei neuron | 4.14e-11 | 3 |
neuron of the substantia nigra | 1.56e-10 | 3 |
somatic stem cell | 3.48e-08 | 91 |
multi fate stem cell | 3.48e-08 | 91 |
neuron of the dorsal spinal cord | 4.00e-08 | 2 |
stem cell | 1.81e-07 | 97 |