FFCP PHASE1:Mm9::chr11:87641811..87641826,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr11:87641811..87641826,- to FFCP PHASE1:Mm9::chr11:87641811..87641826,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76113 | |EntrezGene=76113 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=37 | |||
|TSSclassifier=NA | |||
|UniProt=A7M7R7 | |UniProt=A7M7R7 | ||
|association_with_transcript=-20bp_to_ENSMUST00000136446_5end | |||
|cluster_id=chr11:87641811..87641826,- | |||
|description=CAGE_peak_2_at_Lpo_5end | |||
|id=chr11:87641811..87641826,- | |||
|ontology_enrichment_celltype=CL:0002612!4.24e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,7.62e-20,2;CL:0000129,7.62e-20,2;CL:0002194,1.97e-10,4;CL:0000766,1.97e-10,4;CL:0000234,1.97e-10,4;CL:0000576,1.97e-10,4;CL:0000235,1.97e-10,4;CL:0000864,1.97e-10,4;CL:0002009,1.97e-10,4;CL:0000040,1.97e-10,4;CL:0000559,1.97e-10,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!8.13e-22!12;UBERON:0003057!8.13e-22!12;UBERON:0002240!4.02e-13!6;UBERON:0005174!4.02e-13!6;UBERON:0001137!4.02e-13!6;UBERON:0001948!8.67e-11!5;UBERON:0002315!8.67e-11!5;UBERON:0001017!1.35e-10!73;UBERON:0005743!1.35e-10!73;UBERON:0001049!1.48e-10!52;UBERON:0005068!1.48e-10!52;UBERON:0006241!1.48e-10!52;UBERON:0007135!1.48e-10!52;UBERON:0002298!1.49e-10!6;UBERON:0004733!2.78e-10!6;UBERON:0004732!2.78e-10!6;UBERON:0002028!2.78e-10!6;UBERON:0007277!2.78e-10!6;UBERON:0000073!3.55e-10!75;UBERON:0001016!3.55e-10!75;UBERON:0004121!5.29e-09!102;UBERON:0000924!5.29e-09!102;UBERON:0006601!5.29e-09!102;UBERON:0002257!4.24e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,4.07e-21,2;UBERON:0000076,4.07e-21,2;UBERON:0005333,4.07e-21,2;UBERON:0008425,4.07e-21,2;UBERON:0005311,4.07e-21,2;UBERON:0001896,2.50e-20,2;UBERON:0002298,2.50e-20,2;UBERON:0005290,2.50e-20,2;UBERON:0010096,2.50e-20,2;UBERON:0001044,2.90e-11,1;UBERON:0001736,2.90e-11,1;UBERON:0003293,2.90e-11,1;UBERON:0003294,2.90e-11,1;UBERON:0001829,2.90e-11,1;UBERON:0010047,2.90e-11,1;UBERON:0000167,2.90e-11,1;UBERON:0006298,2.90e-11,1;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0003076,5.86e-08,12;UBERON:0003057,5.86e-08,12;UBERON:0004733,2.04e-07,6;UBERON:0004732,2.04e-07,6;UBERON:0002028,2.04e-07,6;UBERON:0007277,2.04e-07,6;UBERON:0007023,6.39e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,1.19840044207362,1.53687322128622,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0.558365998002762,0.56276261003168,0,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.599162557619291,0,0,0.173824320192276,0,1.24672826735736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.308198933599,24.0064969285117,2.88991061978026,2.22702204525186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59205381778233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0,0,0.441596760403192,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0,0.214871054048298,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,1.19840044207362,1.53687322128622,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0.558365998002762,0.56276261003168,0,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.599162557619291,0,0,0.173824320192276,0,1.24672826735736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.308198933599,24.0064969285117,2.88991061978026,2.22702204525186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59205381778233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0,0,0.441596760403192,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0,0.214871054048298,0,0.441182838239031,0 | ||
|short_description=p2@Lpo | |||
}} | }} |
Latest revision as of 22:24, 25 September 2015
Short description: | p2@Lpo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lpo_5end |
Coexpression cluster: | MCL_coexpression_mm9:37 |
Association with transcript: | -20bp_to_ENSMUST00000136446_5end |
EntrezGene: | Lpo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 7.62e-20 | 2 |
microglial cell | 7.62e-20 | 2 |
monopoietic cell | 1.97e-10 | 4 |
myeloid leukocyte | 1.97e-10 | 4 |
phagocyte | 1.97e-10 | 4 |
monocyte | 1.97e-10 | 4 |
macrophage | 1.97e-10 | 4 |
tissue-resident macrophage | 1.97e-10 | 4 |
macrophage dendritic cell progenitor | 1.97e-10 | 4 |
monoblast | 1.97e-10 | 4 |
promonocyte | 1.97e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 4.07e-21 | 2 |
external ectoderm | 4.07e-21 | 2 |
mammary bud | 4.07e-21 | 2 |
mammary ridge | 4.07e-21 | 2 |
mammary placode | 4.07e-21 | 2 |
medulla oblongata | 2.50e-20 | 2 |
brainstem | 2.50e-20 | 2 |
myelencephalon | 2.50e-20 | 2 |
future myelencephalon | 2.50e-20 | 2 |
saliva-secreting gland | 2.90e-11 | 1 |
submandibular gland | 2.90e-11 | 1 |
gland of oral region | 2.90e-11 | 1 |
gland of foregut | 2.90e-11 | 1 |
major salivary gland | 2.90e-11 | 1 |
oral gland | 2.90e-11 | 1 |
oral cavity | 2.90e-11 | 1 |
submandibular gland primordium | 2.90e-11 | 1 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
posterior neural tube | 5.86e-08 | 12 |
chordal neural plate | 5.86e-08 | 12 |
segmental subdivision of hindbrain | 2.04e-07 | 6 |
segmental subdivision of nervous system | 2.04e-07 | 6 |
hindbrain | 2.04e-07 | 6 |
presumptive hindbrain | 2.04e-07 | 6 |
adult organism | 6.39e-07 | 51 |