FFCP PHASE1:Mm9::chr11:103032395..103032436,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:103032395..103032436,+ to FFCP PHASE1:Mm9::chr11:103032395..103032436,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=57778 | |EntrezGene=57778 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JL26 | |UniProt=Q9JL26 | ||
|association_with_transcript=0bp_to_ENSMUST00000042286_5end | |||
|cluster_id=chr11:103032395..103032436,+ | |||
|description=CAGE_peak_1_at_Fmnl1_5end | |||
|id=chr11:103032395..103032436,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.11e-10!32;CL:0002032!2.11e-10!32;CL:0000037!2.11e-10!32;CL:0000566!2.11e-10!32;CL:0000837!2.11e-10!32;CL:0002031!1.31e-08!25;CL:0000738!2.62e-08!17;CL:0002087!2.62e-08!17;CL:0000838!7.58e-08!12;CL:0000084!2.98e-07!11;CL:0000827!2.98e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.35e-11,32;CL:0002032,3.35e-11,32;CL:0000037,3.35e-11,32;CL:0000837,3.35e-11,32;CL:0002031,2.58e-09,25;CL:0000738,1.58e-08,17;CL:0002087,1.58e-08,17;CL:0000838,5.41e-08,12;CL:0000084,2.20e-07,11;CL:0000827,2.20e-07,11;CL:0000542,9.73e-07,13;CL:0000051,9.73e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.43e-19!48;UBERON:0002390!1.61e-17!45;UBERON:0003061!1.61e-17!45;UBERON:0002405!3.82e-15!70;UBERON:0003081!5.85e-10!88;UBERON:0004177!8.56e-10!29;UBERON:0002371!9.38e-09!16;UBERON:0000926!5.29e-08!193;UBERON:0004120!5.29e-08!193;UBERON:0006603!5.29e-08!193;UBERON:0001474!5.54e-08!22;UBERON:0004765!5.54e-08!22;UBERON:0001434!5.54e-08!22;UBERON:0003408!1.12e-07!24;UBERON:0006562!1.65e-07!24;UBERON:0001557!1.65e-07!24;UBERON:0001042!1.65e-07!24;UBERON:0008814!1.65e-07!24;UBERON:0009145!1.65e-07!24;UBERON:0002370!2.07e-07!23;UBERON:0000974!2.07e-07!23;UBERON:0004807!2.07e-07!23;UBERON:0005058!2.07e-07!23;UBERON:0003351!2.07e-07!23;UBERON:0009113!2.07e-07!23;UBERON:0003295!2.07e-07!23;UBERON:0009722!2.07e-07!23;UBERON:0005562!2.07e-07!23;UBERON:0007690!2.07e-07!23;UBERON:0005057!3.37e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.01e-20,48;UBERON:0002405,7.01e-20,48;UBERON:0002390,1.66e-18,45;UBERON:0003061,1.66e-18,45;UBERON:0004177,1.57e-10,29;UBERON:0005057,1.57e-10,29;UBERON:0003081,8.82e-10,87;UBERON:0000077,1.59e-09,35;UBERON:0002371,6.38e-09,16;UBERON:0003408,2.44e-08,24;UBERON:0001474,3.39e-08,22;UBERON:0004765,3.39e-08,22;UBERON:0001434,3.39e-08,22;UBERON:0006562,3.69e-08,24;UBERON:0001557,3.69e-08,24;UBERON:0001042,3.69e-08,24;UBERON:0008814,3.69e-08,24;UBERON:0009145,3.69e-08,24;UBERON:0002370,4.58e-08,23;UBERON:0000974,4.58e-08,23;UBERON:0004807,4.58e-08,23;UBERON:0005058,4.58e-08,23;UBERON:0003351,4.58e-08,23;UBERON:0009113,4.58e-08,23;UBERON:0003295,4.58e-08,23;UBERON:0009722,4.58e-08,23;UBERON:0005562,4.58e-08,23;UBERON:0007690,4.58e-08,23;UBERON:0000926,3.39e-07,120;UBERON:0004120,3.39e-07,120;UBERON:0006603,3.39e-07,120;UBERON:0001004,7.02e-07,42;UBERON:0002204,9.03e-07,32 | |||
|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0.700837921786577,113.112031334821,55.6115452499084,61.7930349490063,15.7520530767465,16.9914698660067,120.867715331431,119.328849301931,25.649451659806,23.6896062846096,9.09430441566591,101.736548328032,102.835825204304,101.853516431527,6.20816018102809,43.8866004307913,32.388773853228,12.4794089778857,15.5998311125676,0,0.430761996159075,0.430942465371778,2.09025761402011,1.51218077855958,1.77384408524244,0,0,0,0,0.166234645358492,0.204169356262369,227.262675490141,156.26706890476,135.06912594524,239.998447116654,220.623691641578,183.522913445776,0.503587271902309,0.101376931219515,0,1.56478268869608,0,0,0,0,0,75.6699553320391,118.95939128986,138.470645246695,1.02903774414379,3.43840127926508,1.03134418455488,0.606949382578793,0.528990979272033,0,0.338844532069132,0,44.5450360054292,48.4544517657817,63.943210345149,40.4460149199846,21.5162250980071,0.311068836925433,0.270011876663381,0.210324961351382,1.71390590642282,0.883474163806454,0,0.383381884072945,0,1.10115880999389,3.70293280447044,4.14737639791857,0.659431438650969,0.548925861614458,0.52091337055676,2.51264699101243,2.25105044012672,2.90316670775939,0.883885756421003,1.99320353118744,0.559198337475902,2.04460721999597,0.377857800533928,3.76823835312181,0.860423876981386,0,0.539703191637817,0,0,10.8142203501449,0,0,0,0,0,0,0,0,0,0.505524445014783,10.2765491747154,79.4939302796817,7.27366481417641,1.21439728736295,2.74018930480927,1.84492397804847,1.80867168663147,2.4693628498498,2.89033160058254,1.48316980640624,12.7247434089522,41.5766959416441,7.27950824763341,24.2925670306433,19.3950101254089,3.72783522436244,3.80615036115011,3.56059401582874,6.64188343542338,70.2116629604693,35.9941638596045,52.2258633270296,2.54644086988199,2.28750301409313,0.502617408451458,2.60736480288415,1.02286182932132,2.0778804455956,2.10913641988085,2.34230536855727,27.6183474754407,1.51633655060205,1.47309299120532,0.520481771850815,0.459804208866946,0.180062129805349,0.60281927134286,0.95251098811859,0.512454881139399,0.843315521037559,2.32833033665114,0.215567992932842,0.945530400839096,1.23165786914764,1.31517439456545,0.834141747676794,3.83077383174383,2.26360350048738,1.79130840136644,25.2796747432765,23.9333553616685,35.5204374244491,0.414251545071004,0.469052119962192,0.720248245844059,0.473489471170421,0.393528463494808,1.07986979021165,0,2.14618721119695,2.10177616260905,3.29119699826961,6.07419617092652,9.32291309777341,10.3801991071986,12.5143565715899,12.3469905259542,1.26173969138476,0.720332286654991,4.62586296177317,1.05780226665418,0.213288250535234,0.696710015581316,1.41754207454303,1.81515172161008,1.33426826306922,1.33157938278791,3.79623249235609,1.15289268306808,3.01602250560323,3.18330355265841,3.70431765526328,10.7858329038507,2.59365659849633,2.38969527905241,1.13800740571849,0.685491075658373,1.1270773567308,1.22190796707189,1.16371492300575,1.47285221769669,3.85742876457969,6.19962621514329,7.22194148070324,5.18268088471562,2.37162101669719,2.66952169145751,3.53806191203765,4.49724224769707,4.66578279193557,6.27060615356284,7.12952384987975,13.5217184601881,13.943629502653,6.31491250332587,23.0029130443767,6.32639611036456,3.12037673114561,2.02063102357689,1.4351793081753,1.4473305640901,24.2026679118252,1.70542270593436,0.814824882210129,1.52770577197669,0.938760993154008,3.51763140627813,4.52282917683426,9.95181604074774,8.35466263762812,11.5161638617363,9.40783135079174,16.0586048421423,18.6499780415167,20.1062191428301,42.2215595029962,42.4246433378593,8.85175691434265,5.24279817978992,3.53211297973142,4.45404409050372,0,8.33154059774431,0,0,0.646270193198397,0,1.33679204449436,0.849229592366497,0.404810701674894,0.584511715822624,0.790575555893047,2.24924921495265,2.55492153374884,2.67098405500883,2.11753047159649,6.10389454998381,5.30980553359851,0.971122544619926,0.604647113929502,1.32023555829129,2.95301892880773,2.15204603560749,2.84271122485043,4.72593848320757,5.34746067577082,3.47640433729398,6.32511651449993,5.15677716240934,0.340439605753788,0,0.905510786479282,1.07168517515796,1.06404140185364,1.42695054081656,0.658196082408484,1.8267896946876,4.22409074514679,0.847328283455281,1.98475558249466,6.76033637060068,3.06782410722221,2.41251699712623,2.50681922406587,2.1338316966858,5.24665505933731,1.66882771809459,39.1294317027083,20.8450736642855,23.7048995033231,20.1554248995019,29.1158705045784,31.8001660757066,62.7220406677326,59.6193186898783,68.6853869807986,3.81868247206045,0.474503990371703,2.64315307264903,1.08005340821801,1.25452977608681,0.87345025498471,1.48350781023303,3.88471241909079,2.09404753587224,4.14767914533737,10.5627683224777,0,0.598066184175915,0.496375471371293,0.194451188344048,1.6790777052105,1.18269287843545,1.40828686374905,0.781226309063701,0.838874755405687,0.724752362478018,2.01621004380506,58.462057316213,16.8261928690836,14.4822449602406,19.3582026236915,31.1506450461418,43.1138539875345,57.4534248705451,46.5222010599918,47.858097275422,48.3151154192699,57.3700993428623,77.1866415458839,61.0945194416092,70.3598951133045,4.53460767230423,0.887943813496259,0.179427713218951,0.839423081820392,3.28422309854724,7.3196165425961,4.57879060668163,5.35920947697665,1.50471631210609,1.6942555278512,2.30162618253588,1.71868654031819,2.40594455281163,0.685082519770642,2.2661816921691,2.02506750069542,2.2516060161211,4.53142408984205,4.14208249401456,0.103787347584177,0.798049746802062,0.682934423016537,2.67417388775123,1.25767897576789,2.75765262675021,2.44471400581777,1.85431551515005,3.53011130550997,2.52697211763797,1.77435509923168,1.50901073108861,2.52832070168682,2.68905640100451,2.75690250986944,3.33405583898152,4.1718357340148,3.47236596834669,1.64834360321323,2.06078488188156,2.05721551431249,1.95223386775271,2.62279808942053,3.19762116591123,2.72917203204459,3.04612588410035,2.19513567447327,3.15683653725411,4.07412341537585,3.92799590160417,3.44041552560105,2.65962102414021,3.6830793885272,3.09873682371932,4.05103883060397,1.24905288968973,3.27504251823572,4.08255002691767,5.16478496585877,10.1472052794977,7.41977073985349 | |phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0.700837921786577,113.112031334821,55.6115452499084,61.7930349490063,15.7520530767465,16.9914698660067,120.867715331431,119.328849301931,25.649451659806,23.6896062846096,9.09430441566591,101.736548328032,102.835825204304,101.853516431527,6.20816018102809,43.8866004307913,32.388773853228,12.4794089778857,15.5998311125676,0,0.430761996159075,0.430942465371778,2.09025761402011,1.51218077855958,1.77384408524244,0,0,0,0,0.166234645358492,0.204169356262369,227.262675490141,156.26706890476,135.06912594524,239.998447116654,220.623691641578,183.522913445776,0.503587271902309,0.101376931219515,0,1.56478268869608,0,0,0,0,0,75.6699553320391,118.95939128986,138.470645246695,1.02903774414379,3.43840127926508,1.03134418455488,0.606949382578793,0.528990979272033,0,0.338844532069132,0,44.5450360054292,48.4544517657817,63.943210345149,40.4460149199846,21.5162250980071,0.311068836925433,0.270011876663381,0.210324961351382,1.71390590642282,0.883474163806454,0,0.383381884072945,0,1.10115880999389,3.70293280447044,4.14737639791857,0.659431438650969,0.548925861614458,0.52091337055676,2.51264699101243,2.25105044012672,2.90316670775939,0.883885756421003,1.99320353118744,0.559198337475902,2.04460721999597,0.377857800533928,3.76823835312181,0.860423876981386,0,0.539703191637817,0,0,10.8142203501449,0,0,0,0,0,0,0,0,0,0.505524445014783,10.2765491747154,79.4939302796817,7.27366481417641,1.21439728736295,2.74018930480927,1.84492397804847,1.80867168663147,2.4693628498498,2.89033160058254,1.48316980640624,12.7247434089522,41.5766959416441,7.27950824763341,24.2925670306433,19.3950101254089,3.72783522436244,3.80615036115011,3.56059401582874,6.64188343542338,70.2116629604693,35.9941638596045,52.2258633270296,2.54644086988199,2.28750301409313,0.502617408451458,2.60736480288415,1.02286182932132,2.0778804455956,2.10913641988085,2.34230536855727,27.6183474754407,1.51633655060205,1.47309299120532,0.520481771850815,0.459804208866946,0.180062129805349,0.60281927134286,0.95251098811859,0.512454881139399,0.843315521037559,2.32833033665114,0.215567992932842,0.945530400839096,1.23165786914764,1.31517439456545,0.834141747676794,3.83077383174383,2.26360350048738,1.79130840136644,25.2796747432765,23.9333553616685,35.5204374244491,0.414251545071004,0.469052119962192,0.720248245844059,0.473489471170421,0.393528463494808,1.07986979021165,0,2.14618721119695,2.10177616260905,3.29119699826961,6.07419617092652,9.32291309777341,10.3801991071986,12.5143565715899,12.3469905259542,1.26173969138476,0.720332286654991,4.62586296177317,1.05780226665418,0.213288250535234,0.696710015581316,1.41754207454303,1.81515172161008,1.33426826306922,1.33157938278791,3.79623249235609,1.15289268306808,3.01602250560323,3.18330355265841,3.70431765526328,10.7858329038507,2.59365659849633,2.38969527905241,1.13800740571849,0.685491075658373,1.1270773567308,1.22190796707189,1.16371492300575,1.47285221769669,3.85742876457969,6.19962621514329,7.22194148070324,5.18268088471562,2.37162101669719,2.66952169145751,3.53806191203765,4.49724224769707,4.66578279193557,6.27060615356284,7.12952384987975,13.5217184601881,13.943629502653,6.31491250332587,23.0029130443767,6.32639611036456,3.12037673114561,2.02063102357689,1.4351793081753,1.4473305640901,24.2026679118252,1.70542270593436,0.814824882210129,1.52770577197669,0.938760993154008,3.51763140627813,4.52282917683426,9.95181604074774,8.35466263762812,11.5161638617363,9.40783135079174,16.0586048421423,18.6499780415167,20.1062191428301,42.2215595029962,42.4246433378593,8.85175691434265,5.24279817978992,3.53211297973142,4.45404409050372,0,8.33154059774431,0,0,0.646270193198397,0,1.33679204449436,0.849229592366497,0.404810701674894,0.584511715822624,0.790575555893047,2.24924921495265,2.55492153374884,2.67098405500883,2.11753047159649,6.10389454998381,5.30980553359851,0.971122544619926,0.604647113929502,1.32023555829129,2.95301892880773,2.15204603560749,2.84271122485043,4.72593848320757,5.34746067577082,3.47640433729398,6.32511651449993,5.15677716240934,0.340439605753788,0,0.905510786479282,1.07168517515796,1.06404140185364,1.42695054081656,0.658196082408484,1.8267896946876,4.22409074514679,0.847328283455281,1.98475558249466,6.76033637060068,3.06782410722221,2.41251699712623,2.50681922406587,2.1338316966858,5.24665505933731,1.66882771809459,39.1294317027083,20.8450736642855,23.7048995033231,20.1554248995019,29.1158705045784,31.8001660757066,62.7220406677326,59.6193186898783,68.6853869807986,3.81868247206045,0.474503990371703,2.64315307264903,1.08005340821801,1.25452977608681,0.87345025498471,1.48350781023303,3.88471241909079,2.09404753587224,4.14767914533737,10.5627683224777,0,0.598066184175915,0.496375471371293,0.194451188344048,1.6790777052105,1.18269287843545,1.40828686374905,0.781226309063701,0.838874755405687,0.724752362478018,2.01621004380506,58.462057316213,16.8261928690836,14.4822449602406,19.3582026236915,31.1506450461418,43.1138539875345,57.4534248705451,46.5222010599918,47.858097275422,48.3151154192699,57.3700993428623,77.1866415458839,61.0945194416092,70.3598951133045,4.53460767230423,0.887943813496259,0.179427713218951,0.839423081820392,3.28422309854724,7.3196165425961,4.57879060668163,5.35920947697665,1.50471631210609,1.6942555278512,2.30162618253588,1.71868654031819,2.40594455281163,0.685082519770642,2.2661816921691,2.02506750069542,2.2516060161211,4.53142408984205,4.14208249401456,0.103787347584177,0.798049746802062,0.682934423016537,2.67417388775123,1.25767897576789,2.75765262675021,2.44471400581777,1.85431551515005,3.53011130550997,2.52697211763797,1.77435509923168,1.50901073108861,2.52832070168682,2.68905640100451,2.75690250986944,3.33405583898152,4.1718357340148,3.47236596834669,1.64834360321323,2.06078488188156,2.05721551431249,1.95223386775271,2.62279808942053,3.19762116591123,2.72917203204459,3.04612588410035,2.19513567447327,3.15683653725411,4.07412341537585,3.92799590160417,3.44041552560105,2.65962102414021,3.6830793885272,3.09873682371932,4.05103883060397,1.24905288968973,3.27504251823572,4.08255002691767,5.16478496585877,10.1472052794977,7.41977073985349 | ||
|short_description=p1@Fmnl1 | |||
}} | }} |
Latest revision as of 19:02, 26 September 2015
Short description: | p1@Fmnl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fmnl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000042286_5end |
EntrezGene: | Fmnl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.35e-11 | 32 |
hematopoietic oligopotent progenitor cell | 3.35e-11 | 32 |
hematopoietic stem cell | 3.35e-11 | 32 |
hematopoietic multipotent progenitor cell | 3.35e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 2.58e-09 | 25 |
leukocyte | 1.58e-08 | 17 |
nongranular leukocyte | 1.58e-08 | 17 |
lymphoid lineage restricted progenitor cell | 5.41e-08 | 12 |
T cell | 2.20e-07 | 11 |
pro-T cell | 2.20e-07 | 11 |
lymphocyte | 9.73e-07 | 13 |
common lymphoid progenitor | 9.73e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.01e-20 | 48 |
immune system | 7.01e-20 | 48 |
hematopoietic system | 1.66e-18 | 45 |
blood island | 1.66e-18 | 45 |
hemopoietic organ | 1.57e-10 | 29 |
immune organ | 1.57e-10 | 29 |
lateral plate mesoderm | 8.82e-10 | 87 |
mixed endoderm/mesoderm-derived structure | 1.59e-09 | 35 |
bone marrow | 6.38e-09 | 16 |
gland of gut | 2.44e-08 | 24 |
bone element | 3.39e-08 | 22 |
skeletal element | 3.39e-08 | 22 |
skeletal system | 3.39e-08 | 22 |
pharynx | 3.69e-08 | 24 |
upper respiratory tract | 3.69e-08 | 24 |
chordate pharynx | 3.69e-08 | 24 |
pharyngeal arch system | 3.69e-08 | 24 |
pharyngeal region of foregut | 3.69e-08 | 24 |
thymus | 4.58e-08 | 23 |
neck | 4.58e-08 | 23 |
respiratory system epithelium | 4.58e-08 | 23 |
hemolymphoid system gland | 4.58e-08 | 23 |
pharyngeal epithelium | 4.58e-08 | 23 |
thymic region | 4.58e-08 | 23 |
pharyngeal gland | 4.58e-08 | 23 |
entire pharyngeal arch endoderm | 4.58e-08 | 23 |
thymus primordium | 4.58e-08 | 23 |
early pharyngeal endoderm | 4.58e-08 | 23 |
mesoderm | 3.39e-07 | 120 |
mesoderm-derived structure | 3.39e-07 | 120 |
presumptive mesoderm | 3.39e-07 | 120 |
respiratory system | 7.02e-07 | 42 |
musculoskeletal system | 9.03e-07 | 32 |