FFCP PHASE1:Mm9::chr10:80164556..80164623,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:80164556..80164623,- to FFCP PHASE1:Mm9::chr10:80164556..80164623,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=208228 | |EntrezGene=208228 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BSU7 | |UniProt=Q8BSU7 | ||
|association_with_transcript=0bp_to_ENSMUST00000003438,NM_172457,uc007geh.1,uc007gei.1_5end | |||
|cluster_id=chr10:80164556..80164623,- | |||
|description=CAGE_peak_1_at_Mob3a_5end | |||
|id=chr10:80164556..80164623,- | |||
|ontology_enrichment_celltype=CL:0000219!5.09e-11!54;CL:0000988!9.42e-10!32;CL:0002032!9.42e-10!32;CL:0000037!9.42e-10!32;CL:0000566!9.42e-10!32;CL:0000837!9.42e-10!32;CL:0002320!1.20e-09!46;CL:0000134!1.20e-09!46;CL:0002031!2.38e-09!25;CL:0000738!9.27e-08!17;CL:0002087!9.27e-08!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.09e-11,54;CL:0000988,9.38e-10,32;CL:0002032,9.38e-10,32;CL:0000037,9.38e-10,32;CL:0000837,9.38e-10,32;CL:0002320,1.20e-09,46;CL:0000134,1.20e-09,46;CL:0002031,2.36e-09,25;CL:0000738,9.27e-08,17;CL:0002087,9.27e-08,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.25e-18!48;UBERON:0002390!8.83e-17!45;UBERON:0003061!8.83e-17!45;UBERON:0003081!9.75e-12!88;UBERON:0004177!2.45e-10!29;UBERON:0002384!1.20e-09!46;UBERON:0002204!1.25e-09!32;UBERON:0002405!9.05e-09!70;UBERON:0003408!1.82e-08!24;UBERON:0002370!3.37e-08!23;UBERON:0000974!3.37e-08!23;UBERON:0004807!3.37e-08!23;UBERON:0005058!3.37e-08!23;UBERON:0003351!3.37e-08!23;UBERON:0009113!3.37e-08!23;UBERON:0003295!3.37e-08!23;UBERON:0009722!3.37e-08!23;UBERON:0005562!3.37e-08!23;UBERON:0007690!3.37e-08!23;UBERON:0006562!1.02e-07!24;UBERON:0001557!1.02e-07!24;UBERON:0001042!1.02e-07!24;UBERON:0008814!1.02e-07!24;UBERON:0009145!1.02e-07!24;UBERON:0002371!2.39e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.25e-18,48;UBERON:0002405,3.25e-18,48;UBERON:0002390,8.83e-17,45;UBERON:0003061,8.83e-17,45;UBERON:0003081,3.21e-11,87;UBERON:0004177,2.45e-10,29;UBERON:0005057,2.45e-10,29;UBERON:0000077,3.31e-10,35;UBERON:0002384,1.20e-09,46;UBERON:0002204,1.25e-09,32;UBERON:0003408,1.82e-08,24;UBERON:0002370,3.37e-08,23;UBERON:0000974,3.37e-08,23;UBERON:0004807,3.37e-08,23;UBERON:0005058,3.37e-08,23;UBERON:0003351,3.37e-08,23;UBERON:0009113,3.37e-08,23;UBERON:0003295,3.37e-08,23;UBERON:0009722,3.37e-08,23;UBERON:0005562,3.37e-08,23;UBERON:0007690,3.37e-08,23;UBERON:0006562,1.02e-07,24;UBERON:0001557,1.02e-07,24;UBERON:0001042,1.02e-07,24;UBERON:0008814,1.02e-07,24;UBERON:0009145,1.02e-07,24;UBERON:0000926,1.89e-07,120;UBERON:0004120,1.89e-07,120;UBERON:0006603,1.89e-07,120;UBERON:0002371,2.39e-07,16 | |||
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| ||
|short_description=p1@Mob3a | |||
}} | }} |
Latest revision as of 10:09, 26 September 2015
Short description: | p1@Mob3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mob3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000003438, NM_172457, uc007geh.1, uc007gei.1_5end |
EntrezGene: | Mob3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 5.09e-11 | 54 |
hematopoietic cell | 9.38e-10 | 32 |
hematopoietic oligopotent progenitor cell | 9.38e-10 | 32 |
hematopoietic stem cell | 9.38e-10 | 32 |
hematopoietic multipotent progenitor cell | 9.38e-10 | 32 |
connective tissue cell | 1.20e-09 | 46 |
mesenchymal cell | 1.20e-09 | 46 |
hematopoietic lineage restricted progenitor cell | 2.36e-09 | 25 |
leukocyte | 9.27e-08 | 17 |
nongranular leukocyte | 9.27e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.25e-18 | 48 |
immune system | 3.25e-18 | 48 |
hematopoietic system | 8.83e-17 | 45 |
blood island | 8.83e-17 | 45 |
lateral plate mesoderm | 3.21e-11 | 87 |
hemopoietic organ | 2.45e-10 | 29 |
immune organ | 2.45e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 3.31e-10 | 35 |
connective tissue | 1.20e-09 | 46 |
musculoskeletal system | 1.25e-09 | 32 |
gland of gut | 1.82e-08 | 24 |
thymus | 3.37e-08 | 23 |
neck | 3.37e-08 | 23 |
respiratory system epithelium | 3.37e-08 | 23 |
hemolymphoid system gland | 3.37e-08 | 23 |
pharyngeal epithelium | 3.37e-08 | 23 |
thymic region | 3.37e-08 | 23 |
pharyngeal gland | 3.37e-08 | 23 |
entire pharyngeal arch endoderm | 3.37e-08 | 23 |
thymus primordium | 3.37e-08 | 23 |
early pharyngeal endoderm | 3.37e-08 | 23 |
pharynx | 1.02e-07 | 24 |
upper respiratory tract | 1.02e-07 | 24 |
chordate pharynx | 1.02e-07 | 24 |
pharyngeal arch system | 1.02e-07 | 24 |
pharyngeal region of foregut | 1.02e-07 | 24 |
mesoderm | 1.89e-07 | 120 |
mesoderm-derived structure | 1.89e-07 | 120 |
presumptive mesoderm | 1.89e-07 | 120 |
bone marrow | 2.39e-07 | 16 |