FFCP PHASE1:Mm9::chr10:69019199..69019209,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:69019199..69019209,- | |||
|description=CAGE_peak_at_chr10:69019199..69019209,- | |||
|id=chr10:69019199..69019209,- | |||
|ontology_enrichment_celltype=CL:0002610!6.17e-13!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.51e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.09e-23!50;UBERON:0006238!1.09e-23!50;UBERON:0002616!1.70e-21!49;UBERON:0000033!3.51e-18!63;UBERON:0001017!2.24e-17!73;UBERON:0005743!2.24e-17!73;UBERON:0000073!7.88e-17!75;UBERON:0001016!7.88e-17!75;UBERON:0001049!2.19e-15!52;UBERON:0005068!2.19e-15!52;UBERON:0006241!2.19e-15!52;UBERON:0007135!2.19e-15!52;UBERON:0004684!6.17e-13!3;UBERON:0002275!6.17e-13!3;UBERON:0007811!1.69e-12!86;UBERON:0002298!1.38e-11!6;UBERON:0004121!1.57e-11!102;UBERON:0000924!1.57e-11!102;UBERON:0006601!1.57e-11!102;UBERON:0000153!3.60e-11!94;UBERON:0004733!3.69e-11!6;UBERON:0004732!3.69e-11!6;UBERON:0002028!3.69e-11!6;UBERON:0007277!3.69e-11!6;UBERON:0002346!1.48e-10!71;UBERON:0003075!1.48e-10!71;UBERON:0007284!1.48e-10!71;UBERON:0001896!1.03e-09!2;UBERON:0005290!1.03e-09!2;UBERON:0010096!1.03e-09!2;UBERON:0003080!8.93e-09!40;UBERON:0003076!1.51e-08!12;UBERON:0003057!1.51e-08!12;UBERON:0007023!4.28e-08!51;UBERON:0002780!3.39e-07!39;UBERON:0001890!3.39e-07!39;UBERON:0006240!3.39e-07!39;UBERON:0003056!7.21e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,3.28e-17,2;UBERON:0002298,3.28e-17,2;UBERON:0005290,3.28e-17,2;UBERON:0010096,3.28e-17,2;UBERON:0000073,2.00e-11,54;UBERON:0004684,2.51e-11,3;UBERON:0002275,2.51e-11,3;UBERON:0001017,2.39e-10,73;UBERON:0001016,4.73e-10,75;UBERON:0002259,9.82e-10,1;UBERON:0002314,9.82e-10,1;UBERON:0004061,9.82e-10,1;UBERON:0006777,9.82e-10,1;UBERON:0005882,9.82e-10,1;UBERON:0001049,1.72e-09,52;UBERON:0005068,1.72e-09,52;UBERON:0006241,1.72e-09,52;UBERON:0007135,1.72e-09,52;UBERON:0001851,6.33e-09,1;UBERON:0005889,6.33e-09,1;UBERON:0002616,2.94e-08,46;UBERON:0000955,4.50e-08,47;UBERON:0006238,4.50e-08,47;UBERON:0004121,9.14e-08,95;UBERON:0000924,9.14e-08,95;UBERON:0006601,9.14e-08,95;UBERON:0002346,1.34e-07,64;UBERON:0003075,1.34e-07,64;UBERON:0007284,1.34e-07,64;UBERON:0003076,9.73e-07,12;UBERON:0003057,9.73e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.638436690425939,1.38245879930619,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,4.6435098215495,0.915001205637253,0,1.73824320192276,1.02286182932132,1.66230435647648,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5107877947794,0,0.900642406448441,1.35942722695261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.638436690425939,1.38245879930619,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,4.6435098215495,0.915001205637253,0,1.73824320192276,1.02286182932132,1.66230435647648,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5107877947794,0,0.900642406448441,1.35942722695261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:69019199..69019209,- | |||
}} | }} |
Latest revision as of 15:37, 4 August 2015
Short description: | p@chr10:69019199..69019209, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:69019199..69019209, - |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.51e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 3.28e-17 | 2 |
brainstem | 3.28e-17 | 2 |
myelencephalon | 3.28e-17 | 2 |
future myelencephalon | 3.28e-17 | 2 |
regional part of nervous system | 2.00e-11 | 54 |
raphe nuclei | 2.51e-11 | 3 |
reticular formation | 2.51e-11 | 3 |
central nervous system | 2.39e-10 | 73 |
nervous system | 4.73e-10 | 75 |
corpora quadrigemina | 9.82e-10 | 1 |
midbrain tectum | 9.82e-10 | 1 |
neural tube mantle layer | 9.82e-10 | 1 |
tectal plate | 9.82e-10 | 1 |
neural tube alar plate | 9.82e-10 | 1 |
neural tube | 1.72e-09 | 52 |
neural rod | 1.72e-09 | 52 |
future spinal cord | 1.72e-09 | 52 |
neural keel | 1.72e-09 | 52 |
cortex | 6.33e-09 | 1 |
zygote cortex | 6.33e-09 | 1 |
regional part of brain | 2.94e-08 | 46 |
brain | 4.50e-08 | 47 |
future brain | 4.50e-08 | 47 |
ectoderm-derived structure | 9.14e-08 | 95 |
ectoderm | 9.14e-08 | 95 |
presumptive ectoderm | 9.14e-08 | 95 |
neurectoderm | 1.34e-07 | 64 |
neural plate | 1.34e-07 | 64 |
presumptive neural plate | 1.34e-07 | 64 |
posterior neural tube | 9.73e-07 | 12 |
chordal neural plate | 9.73e-07 | 12 |