FFCP PHASE1:Mm9::chr10:61970485..61970512,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:61970485..61970512,- to FFCP PHASE1:Mm9::chr10:61970485..61970512,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19073 | |EntrezGene=19073 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=765 | |||
|TSSclassifier=NA | |||
|UniProt=P13609 | |UniProt=P13609 | ||
|association_with_transcript=0bp_to_ENSMUST00000020271,NM_011157,uc007fhi.1_5end | |||
|cluster_id=chr10:61970485..61970512,- | |||
|description=CAGE_peak_1_at_Srgn_5end | |||
|id=chr10:61970485..61970512,- | |||
|ontology_enrichment_celltype=CL:0000988!7.06e-11!32;CL:0002032!7.06e-11!32;CL:0000037!7.06e-11!32;CL:0000566!7.06e-11!32;CL:0000837!7.06e-11!32;CL:0000838!2.88e-08!12;CL:0002031!3.70e-08!25;CL:0000084!1.06e-07!11;CL:0000827!1.06e-07!11;CL:0000738!1.99e-07!17;CL:0002087!1.99e-07!17;CL:0000542!4.47e-07!13;CL:0000051!4.47e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.87e-11,32;CL:0002032,6.87e-11,32;CL:0000037,6.87e-11,32;CL:0000837,6.87e-11,32;CL:0000838,2.85e-08,12;CL:0002031,3.61e-08,25;CL:0000084,1.04e-07,11;CL:0000827,1.04e-07,11;CL:0000738,1.97e-07,17;CL:0002087,1.97e-07,17;CL:0000542,4.42e-07,13;CL:0000051,4.42e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.94e-17!70;UBERON:0002193!4.22e-16!48;UBERON:0002390!8.21e-15!45;UBERON:0003061!8.21e-15!45;UBERON:0003081!1.13e-12!88;UBERON:0000926!1.06e-10!193;UBERON:0004120!1.06e-10!193;UBERON:0006603!1.06e-10!193;UBERON:0005057!8.05e-10!51;UBERON:0004177!4.73e-09!29;UBERON:0000077!2.38e-07!97;UBERON:0003104!7.01e-07!131;UBERON:0009142!7.01e-07!131;UBERON:0003408!8.68e-07!24;UBERON:0002371!9.23e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.55e-16,48;UBERON:0002405,3.55e-16,48;UBERON:0002390,6.93e-15,45;UBERON:0003061,6.93e-15,45;UBERON:0003081,3.52e-12,87;UBERON:0000077,7.45e-11,35;UBERON:0000926,2.22e-10,120;UBERON:0004120,2.22e-10,120;UBERON:0006603,2.22e-10,120;UBERON:0004177,4.09e-09,29;UBERON:0005057,4.09e-09,29;UBERON:0001041,4.81e-07,80;UBERON:0003408,7.61e-07,24;UBERON:0002371,9.14e-07,16 | |||
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|phase1_expression=14.733693933641,1.39590163055744,0.909998478779072,0.60492842261366,1.00179145989269,0.16787927191189,1.16806320297763,836.460889254531,13921.4704238011,13586.5094948864,2855.40205609675,2423.15910164234,430.056233587189,393.129549678231,184.209698284061,258.560916456808,126.620699941195,644.173741661521,633.742912125725,688.784404868203,69.8205412140283,837.122009574664,1009.79838481112,155.352642532398,156.227720406743,3.44539178469012,1.29228598847722,1.939241094173,16.7220609121609,35.0321880366304,43.4591800884397,0.635030673459631,0,15.8481681015439,0.288851619751275,1.16364251750945,0.612508068787107,1720.58353395943,1490.00650200689,813.032374391309,2781.15847541064,2804.58476123938,1051.61542466548,3.65100772129174,2.93993100536592,0.734187008646726,3.9119567217402,0.218025156380447,0.878744730937887,1.1665793944457,4.05960622713551,2.87505128729943,1407.86384743047,1111.25480156138,1096.67406660186,29.8420945801698,10.3152038377952,64.9746836269577,0.202316460859598,2.11596391708813,1.26766280701236,0,0.889294796111139,96.2892697491097,106.797567157233,85.9680939084781,44.9400165777607,23.8215349299364,0.414758449233911,0.270011876663381,1.05162480675691,7.9982275633065,9.27647871996777,0.857435594504678,1.34183659425531,1.83843757322004,11.0115880999389,11.7472351038373,10.2916377281683,0.395658863190582,1.46380229763855,1.56274011167028,17.3093459380856,24.1987922313622,21.2389564409766,7.36571463684169,6.40672563595963,3.16879057903011,81.1027530598401,5.13886608726142,825.244199333677,175.526470904203,6.79971333707751,3.2382191498269,12.3457519315057,8.96053774194671,110.108425383293,0.170430322578058,0,0.70667914902068,2.81686839553361,2.56652954828636,2.54805239706646,0,0,0.253359865475099,0.505524445014783,81.4131062396898,1835.35171929115,109.698740768906,9.36820764537134,27.0974275697806,24.2146272118861,42.9559525574974,61.2637164177022,46.1196390179909,335.443571215545,206.343282324714,898.764320781072,61.6331698299629,157.901685699181,143.523074928026,22.3670113461747,11.1256702864388,9.42510180660548,86.3444846605039,2673.91413359862,2849.53797221869,2966.58152124777,21.12048015608,21.0450277296568,2.1361239859187,14.6012428961512,13.0414883238469,13.714010940931,11.8436122039463,31.1628453381968,236.870872041617,58.6316799566125,30.0931853917658,4.42409506073193,3.67843367093557,7.74267158163002,17.1803492332715,14.0835553243249,11.2740073850668,7.49613796477831,19.1440494346872,2.80238390812695,4.53854592402766,8.44565395986955,23.0155519048954,43.0973236299677,114.226710619271,122.440371162726,5.17489093728082,3401.52067934531,3713.53029966534,3294.5916119925,6.83515049367156,12.195355119017,7.20248245844059,9.70653415899362,10.231740050865,10.181629450567,9.76642567951713,10.7309360559848,20.3171695718875,12.1774288935976,42.5193731964857,58.3695428730161,66.9595942408022,93.9674493445697,99.8495755577166,14.930586348053,6.17427674275707,70.0487819925652,37.2875298995597,4.47905326123991,6.0381534683714,11.4692040576663,9.07575860805041,10.4517680607089,14.0766963323294,34.6406214927493,15.481701744057,21.8661631656234,24.2726895890204,23.7856186285327,27.8634016682809,34.7982260298258,42.4170912031802,4.55202962287396,6.05517116831563,6.76246414038483,5.90588850751411,8.72786192254316,18.3054489913731,42.0522971876311,53.8777040125548,56.9905382064191,70.7065749271917,45.9501571985081,77.9166643694159,70.9577972358663,115.129401541045,141.799224850564,131.441552065067,124.257415669333,175.494643844994,172.836151742188,93.3508804839477,27.3159592401974,84.4759951207503,44.9334249284967,31.3197808654419,30.8563551257689,32.806159452709,305.397023345398,7.39016505904891,14.9927778326664,9.67546988918572,11.2651319178481,24.1209010716215,29.9934987516377,70.4432468766654,90.4825727169536,93.9010284110806,63.4629979256799,143.380400376271,151.44472909639,184.138251574264,239.758141463443,267.057690754986,77.2069908639887,80.0216564283724,24.72479085812,20.3948334670434,0,62.8652608738889,0.631016438832513,0,0,0,0.222798674082394,0.566153061577665,0,0.292255857911312,0,21.5285282002611,57.3437944241405,29.9150214160989,46.5856703751228,193.674924369757,45.1333470355874,4.61283208694465,8.16273603804828,15.8428266994954,25.986566573508,33.2029959779442,43.6743815454294,28.7191646287229,22.4593348382374,44.2451461110142,32.6797686582496,30.9406629744561,24.5116516142727,5.58189391497062,4.65691261617916,4.07240366560025,12.4138163549592,10.8804978737263,9.87294123612726,12.178597964584,4304.11379759651,1886.36459104232,17.201215048287,68.2629087177727,135.468653997865,44.3903127471227,26.9781497447088,26.754966658445,42.5562021479582,30.0388989257026,443.068193908832,176.460772108555,460.763984095843,207.393671162165,210.919193373542,187.140545682936,4038.687496654,3850.4843077808,3682.61470196648,60.1442489349522,7.43389584915668,19.1120299099238,6.26430976766447,11.7089445768102,15.2853794622324,11.7331981354794,23.4735814259954,26.437350140387,24.3676149788571,72.69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| ||
|short_description=p1@Srgn | |||
}} | }} |
Latest revision as of 04:30, 26 September 2015
Short description: | p1@Srgn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Srgn_5end |
Coexpression cluster: | MCL_coexpression_mm9:765 |
Association with transcript: | 0bp_to_ENSMUST00000020271, NM_011157, uc007fhi.1_5end |
EntrezGene: | Srgn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.87e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.87e-11 | 32 |
hematopoietic stem cell | 6.87e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.87e-11 | 32 |
lymphoid lineage restricted progenitor cell | 2.85e-08 | 12 |
hematopoietic lineage restricted progenitor cell | 3.61e-08 | 25 |
T cell | 1.04e-07 | 11 |
pro-T cell | 1.04e-07 | 11 |
leukocyte | 1.97e-07 | 17 |
nongranular leukocyte | 1.97e-07 | 17 |
lymphocyte | 4.42e-07 | 13 |
common lymphoid progenitor | 4.42e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.55e-16 | 48 |
immune system | 3.55e-16 | 48 |
hematopoietic system | 6.93e-15 | 45 |
blood island | 6.93e-15 | 45 |
lateral plate mesoderm | 3.52e-12 | 87 |
mixed endoderm/mesoderm-derived structure | 7.45e-11 | 35 |
mesoderm | 2.22e-10 | 120 |
mesoderm-derived structure | 2.22e-10 | 120 |
presumptive mesoderm | 2.22e-10 | 120 |
hemopoietic organ | 4.09e-09 | 29 |
immune organ | 4.09e-09 | 29 |
foregut | 4.81e-07 | 80 |
gland of gut | 7.61e-07 | 24 |
bone marrow | 9.14e-07 | 16 |