FFCP PHASE1:Hg19::chrX:37545026..37545064,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:37545026..37545064,+ to FFCP PHASE1:Hg19::chrX:37545026..37545064,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7504 | |EntrezGene=7504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12811 | |HGNC=12811 | ||
|TSSclassifier=strong | |||
|UniProt=P51811 | |UniProt=P51811 | ||
|association_with_transcript=14bp_to_ENST00000378616_5end | |||
|cluster_id=chrX:37545026..37545064,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_XK_5end | |||
|id=chrX:37545026..37545064,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.53e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.37e-14!106;DOID:162!3.09e-09!235;DOID:0050687!3.59e-09!143;DOID:14566!2.42e-08!239;DOID:8692!4.87e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.01e-09;31!DOID:1036;1.93e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.25e-10,31;DOID:305,3.16e-09,106;DOID:1036,2.04e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-43!115;UBERON:0001049!2.22e-13!57;UBERON:0005068!2.22e-13!57;UBERON:0006241!2.22e-13!57;UBERON:0007135!2.22e-13!57;UBERON:0003080!4.73e-10!42;UBERON:0002616!4.90e-10!59;UBERON:0004921!9.11e-10!129;UBERON:0004185!9.11e-10!129;UBERON:0002780!9.28e-10!41;UBERON:0001890!9.28e-10!41;UBERON:0006240!9.28e-10!41;UBERON:0000178!1.19e-09!15;UBERON:0000179!1.19e-09!15;UBERON:0000463!1.19e-09!15;UBERON:0003075!1.30e-09!86;UBERON:0007284!1.30e-09!86;UBERON:0001017!9.90e-09!82;UBERON:0002346!1.11e-08!90;UBERON:0000955!1.33e-08!69;UBERON:0006238!1.33e-08!69;UBERON:0002619!1.85e-08!22;UBERON:0005743!2.10e-08!86;UBERON:0001007!2.12e-08!155;UBERON:0001555!2.12e-08!155;UBERON:0007026!2.12e-08!155;UBERON:0001893!3.46e-08!34;UBERON:0002020!4.06e-08!34;UBERON:0003528!4.06e-08!34;UBERON:0001869!7.55e-08!32;UBERON:0001950!8.08e-08!20;UBERON:0002791!9.58e-08!33;UBERON:0004119!1.29e-07!169;UBERON:0000925!1.29e-07!169;UBERON:0006595!1.29e-07!169;UBERON:0000077!8.09e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.21e-12;15!UBERON:0000179;3.21e-12;15!UBERON:0000463;3.21e-12;15!UBERON:0005409;1.80e-09;22!UBERON:0007023;2.75e-08;114!UBERON:0000160;2.89e-08;17!UBERON:0004921;4.06e-08;33!UBERON:0002619;1.96e-07;22!UBERON:0001950;2.37e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.46e-33,114;UBERON:0011216,3.90e-12,223;UBERON:0000178,7.83e-12,15;UBERON:0000179,7.83e-12,15;UBERON:0000463,7.83e-12,15;UBERON:0004921,1.92e-11,118;UBERON:0005409,4.33e-09,25;UBERON:0001007,8.48e-09,145;UBERON:0001555,8.48e-09,145;UBERON:0007026,8.48e-09,145;UBERON:0001049,1.95e-08,56;UBERON:0005068,1.95e-08,56;UBERON:0006241,1.95e-08,56;UBERON:0007135,1.95e-08,56;UBERON:0000160,2.99e-08,17;UBERON:0000073,6.83e-08,53;UBERON:0002616,6.83e-08,53;UBERON:0001041,1.31e-07,87;UBERON:0002619,1.52e-07,22;UBERON:0001950,1.93e-07,20;UBERON:0004119,2.33e-07,160;UBERON:0000925,2.33e-07,160;UBERON:0006595,2.33e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,3.54027849164014,0.383829398097213,0.154816123316076,0,0,0,6.27484324700443,0,0.880801318004542,0.553995408531877,0.200544447470142,0.651032612147555,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,1.77901850772711,0,0,0.574752439954483,0.661044872784862,0,1.70763890732835,1.17447437874188,0,0,0.560508562981536,10.5353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0.523916301990851,0.364295288292542,0,0,0,0,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.530119073285941,0.929551542956147,0.932949495138334,1.51392510525377,0.72995471815166,0,0,0,0,0,1.41968160047813,2.36018566109342,1.68707720918437,1.54411561825352,1.52515610864684,2.37270619111097,1.75280700608214,1.76599318612811,1.92373578473195,0,0,0,0,2.53510069643662,3.9313088667105,1.18157981336281,0,2.58275720940538,0,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0.445893486866185,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,1.24396869324463,0.576479813667846,1.64115163454294,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0,0,1.30139853857622,0,0,0,0.749007023947182,5.9832291840805,1.65766205374414,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,1.03384013061444,1.2942852049117,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0.736647911487171,0,0.364182336013434,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,1.78413391131527,0.831076008928724,0,97.7899049840868,107.972841273284,0.256450125116389,0,0,1.44257416306811,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0.661139661443912,0.576570202095319,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,126.861902308042,137.634697285628,113.929437434833,49.5522092952201,42.370314127878,131.640082172122,120.967041941338,140.383156204086,0,0,0,0.557409525377156,0,0,0,0.798317485731266,0,18.6272752797017,6.81706074576566,2.52717460302113,0.228234679033192,0,0,0,0,0,1.70338495076131,0,0,1.11838053946208,1.16794399198336,4.68931428964897,55.4028286051532,27.0792277684967,40.8388074498734,37.6371323837537,57.8046720860183,25.6382540359261,0.586032717087576,0.242721043499027,0,0.568272293612826,1.19372242368845,0,0,0,0.984685914873589,0,0,0,2.19172787076177,3.86797481743607,4.78672220923124,0,0,0,9.34630851932199,0.179021174675609,0,2.26879832964947,119.74154617347,0,2.90799823828566,2.96857914117924,0,0.7812832832557,0.0874599999961957,1.44999915086959,1.137934482855,0.508507300585533,3.54581522651905,0.689486746482929,0,0.347249989866585,0.885741385813839,0.60298219312704,12.2065389053667,5.63954225649246,9.16197618755997,3.94893714877151,6.31843088410143,10.3173570766166,1.69290568708354,0,1.1528195219403,0,1.19512109114209,0,0.183195186803725,0,0,9.10485487091144,19.7791901461186,15.1149092613511,18.4298782258675,15.2717644148017,26.3757688486617,26.860281847684,2.53197677433632,0.326465616318295,0.282706142867882,14.4980388627201,18.9099766904916,17.2492250781511,23.8301756524114,1.48260564340311,1.35920332841153,1.04421949505455,1.55022605855557,6.42062117839031,0.937057782901357,0.182454789215666,6.45693242475896,0,0.394584402849391,12.0990716048664,1.53036380815245,1.51647791108371,1.65355761355942,2.38482840213668,0,0,0,0,9.39211501898316,0,0,1.27390116638691,1.30588809870604,0.34945333648406,0,4.93457289574334,5.84714536689484,6.15865927899069,2.81268147816416,0,1.58186518546373,0.274083849293502,0.19871461170299,3.10222900183806,2.34661659281764,1.76349404553374,1.49417096317547,0.19980960958213,15.8499458869517,0.229073192331831,0.514784993585894,0,0.124252535565433,1.41416420770077,0.271808412147228,0.523014231561666,0,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0,2.51354161145029,4.81236890424536,1.43574604915363,10.5829870264465,12.018329347824,10.7122299572099,5.97932905131864,0,4.65983798109815,0,0,0,5.31508400179643,0,3.97614844904652,0.681017030557878,0.643012593860077,0.137539436597234,0,0,0,3.21972650287531,0,0.630445658393585,2.51782023047991,0.211200673038813,0.179287339332845,4.41404953834724,2.1440859791201,9.2692875851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| ||
|short_description=p1@XK | |||
}} | }} |
Latest revision as of 23:07, 24 September 2015
Short description: | p1@XK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XK_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 14bp_to_ENST00000378616_5end |
EntrezGene: | XK |
HGNC: | 12811 |
UniProt: | P51811 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.46e-33 | 114 |
organ system subdivision | 3.90e-12 | 223 |
blood | 7.83e-12 | 15 |
haemolymphatic fluid | 7.83e-12 | 15 |
organism substance | 7.83e-12 | 15 |
subdivision of digestive tract | 1.92e-11 | 118 |
gastrointestinal system | 4.33e-09 | 25 |
digestive system | 8.48e-09 | 145 |
digestive tract | 8.48e-09 | 145 |
primitive gut | 8.48e-09 | 145 |
neural tube | 1.95e-08 | 56 |
neural rod | 1.95e-08 | 56 |
future spinal cord | 1.95e-08 | 56 |
neural keel | 1.95e-08 | 56 |
intestine | 2.99e-08 | 17 |
regional part of nervous system | 6.83e-08 | 53 |
regional part of brain | 6.83e-08 | 53 |
foregut | 1.31e-07 | 87 |
regional part of cerebral cortex | 1.52e-07 | 22 |
neocortex | 1.93e-07 | 20 |
endoderm-derived structure | 2.33e-07 | 160 |
endoderm | 2.33e-07 | 160 |
presumptive endoderm | 2.33e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.25e-10 | 31 |
carcinoma | 3.16e-09 | 106 |
chronic leukemia | 2.04e-07 | 8 |