FFCP PHASE1:Hg19::chrX:131353502..131353511,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:131353502..131353511,- to FFCP PHASE1:Hg19::chrX:131353502..131353511,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57826 | |EntrezGene=57826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21165 | |HGNC=21165 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_uc004ewq.3,uc010nrk.2_5end | |||
|cluster_id=chrX:131353502..131353511,- | |||
|description=CAGE_peak_10_at_RAP2C_5end | |||
|id=chrX:131353502..131353511,- | |||
|ontology_enrichment_celltype=CL:0000738!5.89e-14!140;CL:0002087!9.10e-14!119;CL:0002031!2.08e-12!124;CL:0002057!8.35e-11!42;CL:0000860!1.46e-10!45;CL:0002009!6.97e-10!65;CL:0002194!7.99e-10!63;CL:0000576!7.99e-10!63;CL:0000040!7.99e-10!63;CL:0000559!7.99e-10!63;CL:0000037!2.25e-09!172;CL:0000566!2.25e-09!172;CL:0000766!5.94e-09!76;CL:0000839!6.73e-09!70;CL:0000557!8.41e-09!71;CL:0002032!1.02e-08!165;CL:0000837!1.02e-08!165;CL:0000988!1.20e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.80e-22;33!CL:0002057;3.80e-22;33!CL:0000473;8.58e-16;39!CL:0000234;8.58e-16;39!CL:0000576;3.35e-13;48!CL:0000766;1.86e-10;69!CL:0002393;1.68e-09;6!CL:0002397;1.68e-09;6!CL:0002087;6.90e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.46e-29,42;CL:0002057,3.46e-29,42;CL:0000473,3.81e-25,48;CL:0000234,3.81e-25,48;CL:0002194,1.73e-19,59;CL:0000576,1.73e-19,59;CL:0000040,1.73e-19,59;CL:0000559,1.73e-19,59;CL:0002009,9.32e-19,61;CL:0000839,4.01e-17,66;CL:0000557,7.97e-17,67;CL:0000766,1.85e-15,72;CL:0002087,2.48e-11,115;CL:0000738,2.56e-10,136;CL:0002031,2.27e-09,120;CL:0000763,2.47e-09,108;CL:0000049,2.47e-09,108;CL:0000037,1.15e-07,168;CL:0000988,4.26e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.77e-20;42!UBERON:0000358;1.85e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.96e-07;1!DOID:10165;3.96e-07;1!DOID:1798;3.96e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.57e-07,1;DOID:10165,6.57e-07,1;DOID:1798,6.57e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.02e-07;1!UBERON:0001389;3.96e-07;1!UBERON:0000026;3.96e-07;1!UBERON:0008784;3.96e-07;1!UBERON:0006058;3.96e-07;1!UBERON:0003663;3.96e-07;1!UBERON:0004256;3.96e-07;1!UBERON:0004708;3.96e-07;1!UBERON:0002101;3.96e-07;1!UBERON:0004709;3.96e-07;1!UBERON:0002529;3.96e-07;1!UBERON:0010538;3.96e-07;1!UBERON:0003661;3.96e-07;1!UBERON:0010890;3.96e-07;1!UBERON:0002471;3.96e-07;1!UBERON:0001383;3.96e-07;1!UBERON:0010758;3.96e-07;1!UBERON:0010707;3.96e-07;1!UBERON:0000978;3.96e-07;1!UBERON:0002103;3.96e-07;1!UBERON:0001665;3.96e-07;1!UBERON:0003823;3.96e-07;1!UBERON:0000154;3.96e-07;1!UBERON:0010709;3.96e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.71e-14,76;UBERON:0001474,3.21e-13,82;UBERON:0002390,3.67e-12,98;UBERON:0003061,3.67e-12,98;UBERON:0004765,8.72e-12,90;UBERON:0002405,2.60e-11,93;UBERON:0002193,9.63e-11,108;UBERON:0001434,2.58e-10,100;UBERON:0002204,9.15e-08,167;UBERON:0006834,9.91e-08,1;UBERON:0005418,3.02e-07,1;UBERON:0001389,3.02e-07,1;UBERON:0000026,3.02e-07,1;UBERON:0008784,3.02e-07,1;UBERON:0006058,3.02e-07,1;UBERON:0003663,3.02e-07,1;UBERON:0004256,3.02e-07,1;UBERON:0004708,3.02e-07,1;UBERON:0002101,3.02e-07,1;UBERON:0004709,3.02e-07,1;UBERON:0002529,3.02e-07,1;UBERON:0010538,3.02e-07,1;UBERON:0003661,3.02e-07,1;UBERON:0010890,3.02e-07,1;UBERON:0002471,3.02e-07,1;UBERON:0001383,3.02e-07,1;UBERON:0004357,3.02e-07,1;UBERON:0004347,3.02e-07,1;UBERON:0005420,3.02e-07,1;UBERON:0005732,3.02e-07,1;UBERON:0010758,3.02e-07,1;UBERON:0010707,3.02e-07,1;UBERON:0000978,3.02e-07,1;UBERON:0002103,3.02e-07,1;UBERON:0001665,3.02e-07,1;UBERON:0003823,3.02e-07,1;UBERON:0000154,3.02e-07,1;UBERON:0010709,3.02e-07,1;UBERON:0005733,3.02e-07,1;UBERON:0005730,3.02e-07,1 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,1.0007329835313,0.893922188854576,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0.410502947249729,0.0787107813136792,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0,0,4.9859586767869,1.60435557976113,0.868043482863407,0.447830948479849,0.647787332037959,0,0.290796477559129,0,0,0.464858073811369,1.23350366406548,0,0.28769239232215,0.256160706529101,0.47296445977717,1.03423704220986,1.29096936716765,0,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,2.24650318953266,3.19668562899521,0,0.199463657621632,1.27867425159808,3.48251086354301,3.97169657283798,4.35975574296902,0,0,0.217188844705117,4.23779651843358,7.36555271975129,6.32924774881769,0.211255286311942,1.06302149982522,0.628975936525128,0.336985893439485,0,0,0,0.99458338599545,0.91332076882317,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,1.17447437874188,0.382273228125229,1.32171328579026,1.12101712596307,0,0,0.786021525498329,0.411202997999018,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0,0,0.541607727530031,0.128091319725675,0,0.164437904603676,0.276350017785848,0.579606171470105,0.14828656316206,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0.950452044448374,0.451725357233318,0.511946444617674,0,0.236777252044017,0.821127996921047,0.403213486449465,0.534880391567015,0.434473211648397,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.982343066232845,0.364295288292542,0,0.324547393654683,0.174129737299267,0,0.476981248610684,1.14398982156026,0.371457501329565,0.198762407366705,0,0.694281003215189,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0.413303124703062,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0.506328996723799,0.194874010322397,0,0,0,0,0.302256294682921,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.414644220061482,0.252320850875628,0,0,0,0,0,0.721879481669586,0.118306800039844,0.842923450390509,0.241011029883482,0.55146986366197,0.871517776369625,0.474541238222193,0.674156540800822,0.196221465125346,0,0,1.40241773803446,0,0,2.53510069643662,0,0.590789906681404,0,0,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0.246217006087397,0.468008530278475,0.594524649154913,0.93733833986777,0,0,0.0895585227028483,0,0,0,0,0,0.432359860250884,0.12624243342638,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.579125226670317,0,0.179060963239896,0,0.591092280605782,0.862510299438069,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,1.06727557803444,0.303127571446259,0,0,0,0.61384789315225,0,0.256278298511402,0,0.160853921143607,0,0.462629081407967,0.355123450626254,0,0,0,0.120859449591622,0,0.184161977871793,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.170453254832202,0.267096106940212,0,0,0,0.2023155617111,0,0,0,0,0,0.869932992075073,0.37064843820784,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,0.213648142254946,0,0,0.185803175125719,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0.37428108081644,0.146508179271894,0.121360521749513,0.557216921387392,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0.222617410045812,0.329607748453519,0,0,0.552567831062295,0,0,0,0.311039587661807,0.269605053441981,0,0,0.394573622547734,0,0,0,0,0,0.260427761085233,0.437299999980979,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0.139423744278603,0.846452843541768,0.227884111694002,0.23056390438806,1.43612231055635,0.217294743844016,0,0,0.533034776018635,0,0,0,0.225595660617181,0,0.167821586975843,0.569261198172555,0,0,0,0,0,0,0.442287822516696,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0.505492637027904,0,0.207376382794494,0,0.330991955875499,0,0,0.284609546029793,0.416024019039416,0.173559738335131,0.0979923974143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| ||
|short_description=p10@RAP2C | |||
}} | }} |
Latest revision as of 11:17, 19 September 2015
Short description: | p10@RAP2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RAP2C_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_uc004ewq.3, uc010nrk.2_5end |
EntrezGene: | RAP2C |
HGNC: | 21165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.46e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.46e-29 | 42 |
defensive cell | 3.81e-25 | 48 |
phagocyte | 3.81e-25 | 48 |
monopoietic cell | 1.73e-19 | 59 |
monocyte | 1.73e-19 | 59 |
monoblast | 1.73e-19 | 59 |
promonocyte | 1.73e-19 | 59 |
macrophage dendritic cell progenitor | 9.32e-19 | 61 |
myeloid lineage restricted progenitor cell | 4.01e-17 | 66 |
granulocyte monocyte progenitor cell | 7.97e-17 | 67 |
myeloid leukocyte | 1.85e-15 | 72 |
nongranular leukocyte | 2.48e-11 | 115 |
leukocyte | 2.56e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 2.27e-09 | 120 |
myeloid cell | 2.47e-09 | 108 |
common myeloid progenitor | 2.47e-09 | 108 |
hematopoietic stem cell | 1.15e-07 | 168 |
hematopoietic cell | 4.26e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.57e-07 | 1 |
endocrine pancreas cancer | 6.57e-07 | 1 |
pancreatic endocrine carcinoma | 6.57e-07 | 1 |