FFCP PHASE1:Hg19::chr9:33442964..33442978,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:33442964..33442978,- to FFCP PHASE1:Hg19::chr9:33442964..33442978,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=360 | |EntrezGene=360 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=636 | |HGNC=636 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=128bp_to_ENST00000494313_5end | |||
|cluster_id=chr9:33442964..33442978,- | |||
|coexpression_cluster_id=C170 | |||
|description=CAGE_peak_4_at_AQP3_5end | |||
|id=chr9:33442964..33442978,- | |||
|ontology_enrichment_celltype=CL:0002150!2.81e-08!3;CL:0000861!2.81e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.75e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.20e-24;29!UBERON:0006298;1.15e-07;1!UBERON:0008801;2.17e-07;1 | |||
|ontology_enrichment_disease=DOID:305!7.91e-19!106;DOID:1749!5.45e-13!14;DOID:0050687!3.03e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.98e-14;4!DOID:1612;1.98e-14;4!DOID:3151;5.58e-08;1!DOID:3149;5.58e-08;1!DOID:305;3.15e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.54e-20,106;DOID:5093,1.50e-14,4;DOID:1612,1.50e-14,4;DOID:0050687,9.54e-14,143;DOID:162,8.76e-11,235;DOID:14566,1.85e-10,239;DOID:3151,5.96e-08,1;DOID:3149,5.96e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001557!1.66e-23!19;UBERON:0001737!9.96e-21!9;UBERON:0001004!1.05e-15!72;UBERON:0000974!6.18e-15!10;UBERON:0000065!7.35e-14!53;UBERON:0000072!3.51e-11!46;UBERON:0004119!8.83e-09!169;UBERON:0000925!8.83e-09!169;UBERON:0006595!8.83e-09!169;UBERON:0003343!1.56e-08!4;UBERON:0004785!1.56e-08!4;UBERON:0008947!2.13e-08!38;UBERON:0003258!2.13e-08!38;UBERON:0001007!7.39e-08!155;UBERON:0001555!7.39e-08!155;UBERON:0007026!7.39e-08!155;UBERON:0000344!1.13e-07!12;UBERON:0004921!1.88e-07!129;UBERON:0004185!1.88e-07!129;UBERON:0000077!2.39e-07!130;UBERON:0001041!3.58e-07!98;UBERON:0003408!6.54e-07!10;UBERON:0001042!7.41e-07!10;UBERON:0009145!7.41e-07!10;UBERON:0003729!8.22e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.49e-56;9!UBERON:0001557;1.49e-56;9!UBERON:0000072;6.63e-17;37!UBERON:0000065;2.47e-14;44!UBERON:0001829;2.24e-13;2!UBERON:0001004;7.11e-10;65!UBERON:0001736;1.15e-07;1!UBERON:0002372;2.17e-07;1!UBERON:0007029;2.17e-07;1!UBERON:0001831;2.17e-07;1!UBERON:0001961;2.17e-07;1!UBERON:0001744;2.17e-07;1!UBERON:0001042;2.17e-07;1!UBERON:0001567;2.17e-07;1!UBERON:0001735;2.17e-07;1!UBERON:0000014;2.89e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.24e-56,9;UBERON:0001557,1.68e-38,19;UBERON:0000072,3.87e-20,47;UBERON:0001004,2.08e-18,74;UBERON:0008947,2.79e-18,38;UBERON:0003258,2.79e-18,38;UBERON:0000065,3.38e-17,54;UBERON:0001829,3.07e-13,2;UBERON:0001041,3.33e-13,87;UBERON:0004921,7.47e-09,118;UBERON:0001007,9.47e-08,145;UBERON:0001555,9.47e-08,145;UBERON:0007026,9.47e-08,145;UBERON:0001736,1.30e-07,1;UBERON:0006298,1.30e-07,1;UBERON:0007029,1.48e-07,1;UBERON:0002372,2.17e-07,1;UBERON:0001961,2.17e-07,1;UBERON:0001744,2.17e-07,1;UBERON:0001735,2.17e-07,1;UBERON:0000014,2.47e-07,4;UBERON:0001831,2.63e-07,1;UBERON:0001567,2.63e-07,1;UBERON:0008801,2.63e-07,1;UBERON:0004119,9.71e-07,160;UBERON:0000925,9.71e-07,160;UBERON:0006595,9.71e-07,160;UBERON:0000166,9.88e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02243120135469,4.21461725195254,2.41011029883482,3.97058301836618,3.7039505495709,2.60997681022206,5.79774625088707,5.29797955838434,2.30848294167834,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.789147245095469,0,0,0,0,0,1.30213880542617,0,0,0.1137934482855,0,2.12748913591143,0,0,0,0,0,0,0,0,0,3.81284622316466,1.67308493134324,0.153900517007594,0,0,0,0,0.31900115973192,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,0.174118413160805,0,0,11.2237344295339,8.91689668451464,11.2498176162897,0.290967049465258,0,0.225980740780532,0,0,0,0.586654148204409,0.0801588202515337,0,0,0,0,0,0,0,2.35694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,5.03152031398899,0.157611414598396,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0.279759015438889,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0.471878893390961,1.46742878817343,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.447421727191169,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0.154348316215889,0.655678681511872,0,0,0,0,0,0,0,0,0,0,4.82095634235275,0,0,0,2.2936464170227,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0.23806443146374,0.193766729508018,0.0620747142958579,0,0,0,0,1.02669990325584,1.27968900727716,1.00411087549747,0.99798106963804,0.488419611665847,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02243120135469,4.21461725195254,2.41011029883482,3.97058301836618,3.7039505495709,2.60997681022206,5.79774625088707,5.29797955838434,2.30848294167834,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.789147245095469,0,0,0,0,0,1.30213880542617,0,0,0.1137934482855,0,2.12748913591143,0,0,0,0,0,0,0,0,0,3.81284622316466,1.67308493134324,0.153900517007594,0,0,0,0,0.31900115973192,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,0.174118413160805,0,0,11.2237344295339,8.91689668451464,11.2498176162897,0.290967049465258,0,0.225980740780532,0,0,0,0.586654148204409,0.0801588202515337,0,0,0,0,0,0,0,2.35694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,5.03152031398899,0.157611414598396,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0.279759015438889,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0.471878893390961,1.46742878817343,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.447421727191169,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0.154348316215889,0.655678681511872,0,0,0,0,0,0,0,0,0,0,4.82095634235275,0,0,0,2.2936464170227,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0.23806443146374,0.193766729508018,0.0620747142958579,0,0,0,0,1.02669990325584,1.27968900727716,1.00411087549747,0.99798106963804,0.488419611665847,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p4@AQP3 | |||
}} | }} |
Latest revision as of 03:55, 17 September 2015
Short description: | p4@AQP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AQP3_5end |
Coexpression cluster: | C170_epitheloid_cervical_Hep2_keratoacanthoma_adult_neuroblastoma_signet |
Association with transcript: | 128bp_to_ENST00000494313_5end |
EntrezGene: | AQP3 |
HGNC: | 636 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.75e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.24e-56 | 9 |
upper respiratory tract | 1.68e-38 | 19 |
segment of respiratory tract | 3.87e-20 | 47 |
respiratory system | 2.08e-18 | 74 |
respiratory primordium | 2.79e-18 | 38 |
endoderm of foregut | 2.79e-18 | 38 |
respiratory tract | 3.38e-17 | 54 |
major salivary gland | 3.07e-13 | 2 |
foregut | 3.33e-13 | 87 |
subdivision of digestive tract | 7.47e-09 | 118 |
digestive system | 9.47e-08 | 145 |
digestive tract | 9.47e-08 | 145 |
primitive gut | 9.47e-08 | 145 |
submandibular gland | 1.30e-07 | 1 |
submandibular gland primordium | 1.30e-07 | 1 |
surface | 1.48e-07 | 1 |
tonsil | 2.17e-07 | 1 |
mucosa-associated lymphoid tissue | 2.17e-07 | 1 |
lymphoid tissue | 2.17e-07 | 1 |
tonsillar ring | 2.17e-07 | 1 |
zone of skin | 2.47e-07 | 4 |
parotid gland | 2.63e-07 | 1 |
cheek | 2.63e-07 | 1 |
parotid gland primordium | 2.63e-07 | 1 |
endoderm-derived structure | 9.71e-07 | 160 |
endoderm | 9.71e-07 | 160 |
presumptive endoderm | 9.71e-07 | 160 |
oral opening | 9.88e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.54e-20 | 106 |
thoracic cancer | 1.50e-14 | 4 |
breast cancer | 1.50e-14 | 4 |
cell type cancer | 9.54e-14 | 143 |
cancer | 8.76e-11 | 235 |
disease of cellular proliferation | 1.85e-10 | 239 |
skin squamous cell carcinoma | 5.96e-08 | 1 |
keratoacanthoma | 5.96e-08 | 1 |