FFCP PHASE1:Hg19::chr9:139923358..139923386,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:139923358..139923386,- to FFCP PHASE1:Hg19::chr9:139923358..139923386,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=20 | |EntrezGene=20 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32 | |HGNC=32 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETC3,E7EU84,E9PGB2,Q9BZC7 | |UniProt=E7ETC3,E7EU84,E9PGB2,Q9BZC7 | ||
|association_with_transcript=0bp_to_ENST00000355090,ENST00000459850,ENST00000487109,NM_212533,uc004ckm.1_5end | |||
|cluster_id=chr9:139923358..139923386,- | |||
|description=CAGE_peak_6_at_ABCA2_5end | |||
|id=chr9:139923358..139923386,- | |||
|ontology_enrichment_celltype=CL:0000791!1.59e-09!18;CL:0000789!1.59e-09!18;CL:0002420!1.59e-09!18;CL:0002419!1.59e-09!18;CL:0000790!1.59e-09!18;CL:0000084!2.36e-08!25;CL:0000827!2.36e-08!25;CL:0000625!2.75e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.58e-10;3!CL:0000623;5.81e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.81e-10,3;CL:0000623,4.16e-10,3;CL:0000825,4.16e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.02e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.99e-29!115;UBERON:0001049!3.42e-25!57;UBERON:0005068!3.42e-25!57;UBERON:0006241!3.42e-25!57;UBERON:0007135!3.42e-25!57;UBERON:0002616!1.32e-20!59;UBERON:0005743!2.79e-20!86;UBERON:0000955!5.28e-20!69;UBERON:0006238!5.28e-20!69;UBERON:0002780!8.63e-20!41;UBERON:0001890!8.63e-20!41;UBERON:0006240!8.63e-20!41;UBERON:0001017!1.82e-19!82;UBERON:0002020!4.96e-19!34;UBERON:0003528!4.96e-19!34;UBERON:0003080!4.99e-19!42;UBERON:0001893!5.61e-19!34;UBERON:0000073!1.73e-18!94;UBERON:0001016!1.73e-18!94;UBERON:0002791!4.16e-18!33;UBERON:0003075!3.56e-17!86;UBERON:0007284!3.56e-17!86;UBERON:0001869!5.36e-17!32;UBERON:0002346!2.43e-16!90;UBERON:0002619!9.69e-16!22;UBERON:0001950!3.06e-14!20;UBERON:0003056!6.49e-14!61;UBERON:0000153!2.08e-13!129;UBERON:0007811!2.08e-13!129;UBERON:0000956!5.10e-13!25;UBERON:0000203!5.10e-13!25;UBERON:0000033!2.02e-12!123;UBERON:0004121!7.19e-10!169;UBERON:0000924!1.34e-09!173;UBERON:0006601!1.34e-09!173;UBERON:0002308!1.19e-07!9;UBERON:0000125!1.19e-07!9;UBERON:0003076!2.37e-07!15;UBERON:0003057!2.37e-07!15;UBERON:0002298!2.68e-07!8;UBERON:0000200!5.20e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.27e-32;22!UBERON:0001893;1.01e-31;34!UBERON:0003528;3.88e-31;34!UBERON:0002020;3.88e-31;34!UBERON:0001950;4.61e-31;20!UBERON:0001869;1.32e-29;32!UBERON:0002780;2.50e-29;41!UBERON:0001890;2.50e-29;41!UBERON:0002791;2.91e-29;32!UBERON:0000073;4.37e-28;53!UBERON:0002616;4.37e-28;53!UBERON:0000956;1.02e-27;25!UBERON:0000203;1.02e-27;25!UBERON:0002298;7.78e-18;6!UBERON:0001017;8.31e-17;75!UBERON:0000955;1.07e-16;68!UBERON:0001016;1.07e-14;83!UBERON:0004732;1.27e-13;13!UBERON:0000200;1.14e-11;6!UBERON:0000125;1.46e-11;9!UBERON:0002308;1.46e-11;9!UBERON:0004733;2.79e-11;12!UBERON:0002028;2.79e-11;12!UBERON:0007023;2.37e-10;114!UBERON:0000988;5.81e-10;3!UBERON:0001872;8.02e-10;5!UBERON:0001896;1.38e-09;3!UBERON:0005290;1.38e-09;3!UBERON:0001870;2.07e-09;3!UBERON:0002021;2.14e-09;5!UBERON:0002420;6.87e-08;9!UBERON:0007245;6.87e-08;9!UBERON:0010009;6.87e-08;9!UBERON:0010011;6.87e-08;9!UBERON:0000454;6.87e-08;9!UBERON:0005162;1.62e-07;2!UBERON:0000122;1.62e-07;2!UBERON:0002148;2.99e-07;2!UBERON:0006331;2.99e-07;2!UBERON:0009662;2.99e-07;2!UBERON:0009663;6.01e-07;7!UBERON:0001897;7.17e-07;2!UBERON:0001875;7.17e-07;2!UBERON:0006514;7.17e-07;2!UBERON:0010225;7.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.15e-54,56;UBERON:0005068,2.15e-54,56;UBERON:0006241,2.15e-54,56;UBERON:0007135,2.15e-54,56;UBERON:0000073,1.26e-50,53;UBERON:0002616,1.26e-50,53;UBERON:0000955,3.86e-42,68;UBERON:0006238,3.86e-42,68;UBERON:0001017,2.61e-41,81;UBERON:0002780,2.96e-40,41;UBERON:0001890,2.96e-40,41;UBERON:0003080,2.96e-40,41;UBERON:0006240,2.96e-40,41;UBERON:0001016,1.19e-38,89;UBERON:0003528,2.48e-38,34;UBERON:0002020,2.48e-38,34;UBERON:0001893,3.33e-38,34;UBERON:0003075,1.00e-36,82;UBERON:0007284,1.00e-36,82;UBERON:0002346,1.41e-34,86;UBERON:0002791,1.59e-33,32;UBERON:0001869,3.22e-33,32;UBERON:0002619,3.38e-32,22;UBERON:0001950,2.41e-31,20;UBERON:0007023,7.58e-31,114;UBERON:0010371,7.98e-29,104;UBERON:0000956,5.96e-28,25;UBERON:0000203,5.96e-28,25;UBERON:0003056,2.74e-27,61;UBERON:0010314,3.12e-19,132;UBERON:0004121,9.93e-18,171;UBERON:0000924,9.93e-18,171;UBERON:0006601,9.93e-18,171;UBERON:0002298,1.14e-17,6;UBERON:0003076,9.29e-15,15;UBERON:0003057,9.29e-15,15;UBERON:0004732,1.26e-13,13;UBERON:0011216,5.48e-12,223;UBERON:0000200,5.50e-12,6;UBERON:0000125,1.02e-11,9;UBERON:0002308,1.02e-11,9;UBERON:0004733,2.80e-11,12;UBERON:0002028,2.80e-11,12;UBERON:0007277,2.80e-11,12;UBERON:0001872,5.16e-10,5;UBERON:0000988,6.31e-10,3;UBERON:0000025,1.58e-09,192;UBERON:0001870,1.76e-09,3;UBERON:0002021,1.80e-09,5;UBERON:0001896,1.86e-09,3;UBERON:0005290,1.86e-09,3;UBERON:0010096,1.86e-09,3;UBERON:0002420,6.36e-08,9;UBERON:0007245,6.36e-08,9;UBERON:0010009,6.36e-08,9;UBERON:0010011,6.36e-08,9;UBERON:0000454,6.36e-08,9;UBERON:0005162,1.44e-07,2;UBERON:0000122,1.44e-07,2;UBERON:0002148,2.91e-07,2;UBERON:0006331,2.91e-07,2;UBERON:0009662,2.91e-07,2;UBERON:0001875,4.43e-07,2;UBERON:0006514,4.43e-07,2;UBERON:0009663,4.51e-07,7;UBERON:0001897,5.62e-07,2;UBERON:0010225,5.62e-07,2;UBERON:0002702,9.23e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,0.464448369948228,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,1.40381113229099,0.651032612147555,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0.196709770113833,0.786021525498329,0.411202997999018,0.83593247695339,0,0,0,0.557052284425868,0.883817722424512,0.221533894583621,0.541607727530031,0.25618263945135,0.390178042679635,0.657751618414705,0.829050053357545,1.15921234294021,0,0,0,2.03956816855619,0,0.34362744548263,0,0.95569624297229,0,0.950452044448374,0.301150238155546,1.02389288923535,1.24930726552346,0.710331756132051,0.821127996921047,2.21767417547206,3.20928234940209,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.261958150995425,0,0,0,0,0,7.87019060207628,2.28797964312051,4.45749001595478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,2.75843064282698,2.80315847317372,3.59360501583295,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.979005787313703,0,0.82707210449155,1.07857100409308,1.38745825144478,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.952927101831156,0.822724546172388,0,1.08006287447623,0,0,0.962479855263359,0,0,0.144269212976445,0,0.159426272728822,1.39705560002972,0.191505370132367,0.635020748171649,0,0.842391534340376,2.05411211129873,0.47003968731907,0,0.846458889008016,0.481764225311099,0,0,0.687010689511529,0.614481528616916,0.671028323677248,0.667396566847634,0.19538809540204,0,0,0,0.99921590399346,0,1.49712432326576,0,0.121360521749513,0.222886768554957,0,0,0.296964680832639,0.307160702099232,0,1.1253553312841,0.333926115068718,1.15362711958732,0.211125408127993,0,0.276283915531148,0,0,0,0,0.179736702294654,0,0,0,0,0,1.93866549219044,1.85536196323703,0,1.30213880542617,2.53633999988968,0,0,0.254253650292766,0,0.689486746482929,0,0,0,0.60298219312704,0,0.221158519862449,1.77328571372128,1.75508317723178,0.10893846351899,0.278847488557207,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0.941881538370149,0.166211681900156,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,2.98578579323551,0.176915129006678,1.22206028986725,0,0.123563938946503,0.208843899010911,3.97666684585995,0,1.87411556580271,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.774050650312681,0.511625219603299,0.246346371159628,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,2.40581024632339,0,0.561111741760736,0,0.19980960958213,0.576361668616424,0,0,0.576219191952599,0.124252535565433,0,0.543616824294456,0.104602846312333,0,0,1.80126086612937,3.69644523008381,1.27746588066972,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,2.38568906942791,0.408610218334727,0,0,0.415440338029185,0,1.5476039091159,2.06548492637284,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,3.10279095267721,2.6446520348538,0,0,0.213574825135389,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0.942324577501406,1.77213635993397,0.732157589411779,2.1282458220105,1.14681839138014,2.44043913381075,3.41530216177609,0.138348634936231,0,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,1.52084279766904,0.194860308839388,0,0,0,0,0,0,1.49368421571797,0.172214979660816,0,0,0,0,0,0.215649622793364,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,1.41304295212211,1.41696576325585,2.87340946302872,1.43581454968528,0,2.21303207885497,0.807378228159255,5.71077681036618,0.196295437002051,0.11796972334774,0,0.231051332300676,0,0,0.397832444232549,0,0,0,0,0,0,1.75597720007826,2.34323429584154,1.86018116851066,3.04395888930753,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0.455324382702595,0,0,0,2.24300118823545,2.95977481032821,0,0.111231401892069,0.078493092850514,0.785577949580009,0,0,0.431855182437243,0.47775168788705,0.142953088353313,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0.111855431797792,0.392600934460972,0.609589624911347,0,0,0,0.485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| ||
|short_description=p6@ABCA2 | |||
}} | }} |
Latest revision as of 15:21, 16 September 2015
Short description: | p6@ABCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ABCA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355090, ENST00000459850, ENST00000487109, NM_212533, uc004ckm.1_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | E7ETC3E7EU84E9PGB2Q9BZC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.81e-10 | 3 |
natural killer cell | 4.16e-10 | 3 |
pro-NK cell | 4.16e-10 | 3 |