FFCP PHASE1:Hg19::chr9:131217459..131217466,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:131217459..131217466,+ to FFCP PHASE1:Hg19::chr9:131217459..131217466,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4957 | |EntrezGene=4957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8114 | |HGNC=8114 | ||
|TSSclassifier=strong | |||
|UniProt=B4DX73 | |UniProt=B4DX73 | ||
|association_with_transcript=0bp_to_ENST00000393533,uc011maz.1_5end | |||
|cluster_id=chr9:131217459..131217466,+ | |||
|description=CAGE_peak_3_at_ODF2_5end | |||
|id=chr9:131217459..131217466,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.98e-09!7;CL:0000586!1.98e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.42e-09;7!CL:0000586;2.42e-09;7!CL:0000123;2.77e-09;2!CL:0000242;2.77e-09;2!CL:1000415;2.04e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.56e-09,7;CL:0000586,2.56e-09,7;CL:0000242,2.72e-09,2;CL:1000415,1.33e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.04e-09;10!UBERON:0005564;1.04e-09;10 | |||
|ontology_enrichment_disease=DOID:3095!6.01e-09!22;DOID:2994!6.01e-09!22;DOID:0050687!6.19e-09!143;DOID:305!9.65e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.35e-07;22!DOID:2994;1.35e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.14e-10,143;DOID:305,3.08e-09,106;DOID:3095,1.33e-07,22;DOID:2994,1.33e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-32!57;UBERON:0005068!1.06e-32!57;UBERON:0006241!1.06e-32!57;UBERON:0007135!1.06e-32!57;UBERON:0000073!1.14e-28!94;UBERON:0001016!1.14e-28!94;UBERON:0002616!6.83e-28!59;UBERON:0005743!2.73e-26!86;UBERON:0000955!5.26e-26!69;UBERON:0006238!5.26e-26!69;UBERON:0001017!9.92e-26!82;UBERON:0002780!1.61e-25!41;UBERON:0001890!1.61e-25!41;UBERON:0006240!1.61e-25!41;UBERON:0002346!2.64e-25!90;UBERON:0003075!6.59e-25!86;UBERON:0007284!6.59e-25!86;UBERON:0003080!1.14e-24!42;UBERON:0007023!3.12e-23!115;UBERON:0003056!9.55e-20!61;UBERON:0002020!2.86e-18!34;UBERON:0003528!2.86e-18!34;UBERON:0001893!6.50e-18!34;UBERON:0002791!4.51e-17!33;UBERON:0001869!4.76e-16!32;UBERON:0000924!9.23e-16!173;UBERON:0006601!9.23e-16!173;UBERON:0004121!3.15e-15!169;UBERON:0002619!9.94e-14!22;UBERON:0000033!1.70e-13!123;UBERON:0000956!5.77e-13!25;UBERON:0000203!5.77e-13!25;UBERON:0000153!6.90e-13!129;UBERON:0007811!6.90e-13!129;UBERON:0001950!1.78e-11!20;UBERON:0001894!5.16e-10!7;UBERON:0006222!5.16e-10!7;UBERON:0000025!2.14e-09!194;UBERON:0000062!2.21e-09!511;UBERON:0003076!4.33e-09!15;UBERON:0003057!4.33e-09!15;UBERON:0003135!5.74e-09!11;UBERON:0002298!7.25e-09!8;UBERON:0004733!3.19e-08!12;UBERON:0002028!3.19e-08!12;UBERON:0007277!3.19e-08!12;UBERON:0000473!4.56e-08!8;UBERON:0000064!9.26e-08!219;UBERON:0000475!1.80e-07!365;UBERON:0004732!2.02e-07!13;UBERON:0003296!2.52e-07!4;UBERON:0010133!2.52e-07!4;UBERON:0004111!3.48e-07!241;UBERON:0000483!5.22e-07!309;UBERON:0002308!7.49e-07!9;UBERON:0000125!7.49e-07!9;UBERON:0000119!9.06e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.30e-16;4!UBERON:0010133;2.30e-16;4!UBERON:0001896;2.12e-12;3!UBERON:0005290;2.12e-12;3!UBERON:0002298;2.28e-10;6!UBERON:0001894;2.35e-09;7!UBERON:0000007;2.99e-09;2!UBERON:0001905;7.93e-09;2!UBERON:0002757;7.93e-09;2!UBERON:0010134;7.93e-09;2!UBERON:0005408;7.93e-09;2!UBERON:0001899;7.93e-09;2!UBERON:0003135;1.51e-08;11!UBERON:0001954;2.91e-08;2!UBERON:0003022;2.91e-08;2!UBERON:0002421;2.91e-08;2!UBERON:0002600;2.91e-08;2!UBERON:0000473;4.73e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.32e-16,4;UBERON:0010133,2.32e-16,4;UBERON:0001896,2.30e-12,3;UBERON:0005290,2.30e-12,3;UBERON:0010096,2.30e-12,3;UBERON:0002298,1.97e-10,6;UBERON:0001894,2.35e-09,7;UBERON:0006222,2.35e-09,7;UBERON:0000007,3.18e-09,2;UBERON:0001905,7.50e-09,2;UBERON:0002757,7.50e-09,2;UBERON:0010134,7.50e-09,2;UBERON:0005408,7.50e-09,2;UBERON:0001899,7.50e-09,2;UBERON:0000073,7.68e-09,53;UBERON:0002616,7.68e-09,53;UBERON:0001016,8.83e-09,89;UBERON:0000955,1.35e-08,68;UBERON:0006238,1.35e-08,68;UBERON:0003135,1.70e-08,11;UBERON:0001954,1.94e-08,2;UBERON:0003022,1.94e-08,2;UBERON:0002421,1.94e-08,2;UBERON:0002600,1.94e-08,2;UBERON:0001049,3.13e-08,56;UBERON:0005068,3.13e-08,56;UBERON:0006241,3.13e-08,56;UBERON:0007135,3.13e-08,56;UBERON:0000473,4.87e-08,8;UBERON:0001017,9.32e-08,81 | |||
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| ||
|short_description=p3@ODF2 | |||
}} | }} |
Latest revision as of 19:43, 15 September 2015
Short description: | p3@ODF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ODF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393533, uc011maz.1_5end |
EntrezGene: | ODF2 |
HGNC: | 8114 |
UniProt: | B4DX73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.56e-09 | 7 |
germ cell | 2.56e-09 | 7 |
Merkel cell | 2.72e-09 | 2 |
epithelial cell of gall bladder | 1.33e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 2.32e-16 | 4 |
neuroendocrine gland | 2.32e-16 | 4 |
medulla oblongata | 2.30e-12 | 3 |
myelencephalon | 2.30e-12 | 3 |
future myelencephalon | 2.30e-12 | 3 |
brainstem | 1.97e-10 | 6 |
diencephalon | 2.35e-09 | 7 |
future diencephalon | 2.35e-09 | 7 |
pituitary gland | 3.18e-09 | 2 |
pineal body | 7.50e-09 | 2 |
regional part of epithalamus | 7.50e-09 | 2 |
secretory circumventricular organ | 7.50e-09 | 2 |
circumventricular organ | 7.50e-09 | 2 |
epithalamus | 7.50e-09 | 2 |
regional part of nervous system | 7.68e-09 | 53 |
regional part of brain | 7.68e-09 | 53 |
nervous system | 8.83e-09 | 89 |
brain | 1.35e-08 | 68 |
future brain | 1.35e-08 | 68 |
male reproductive organ | 1.70e-08 | 11 |
Ammon's horn | 1.94e-08 | 2 |
lobe parts of cerebral cortex | 1.94e-08 | 2 |
hippocampal formation | 1.94e-08 | 2 |
limbic lobe | 1.94e-08 | 2 |
neural tube | 3.13e-08 | 56 |
neural rod | 3.13e-08 | 56 |
future spinal cord | 3.13e-08 | 56 |
neural keel | 3.13e-08 | 56 |
testis | 4.87e-08 | 8 |
central nervous system | 9.32e-08 | 81 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.14e-10 | 143 |
carcinoma | 3.08e-09 | 106 |
germ cell and embryonal cancer | 1.33e-07 | 22 |
germ cell cancer | 1.33e-07 | 22 |