FFCP PHASE1:Hg19::chr9:130027141..130027159,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:130027141..130027159,+ to FFCP PHASE1:Hg19::chr9:130027141..130027159,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84253 | |EntrezGene=84253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25425 | |HGNC=25425 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENST00000373386_5end | |||
|cluster_id=chr9:130027141..130027159,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_9_at_GARNL3_5end | |||
|id=chr9:130027141..130027159,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.13e-21;3!UBERON:0006601;7.81e-13;82!UBERON:0000358;8.01e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.47e-82!57;UBERON:0005068!1.47e-82!57;UBERON:0006241!1.47e-82!57;UBERON:0007135!1.47e-82!57;UBERON:0000073!6.43e-78!94;UBERON:0001016!6.43e-78!94;UBERON:0001017!1.01e-76!82;UBERON:0005743!5.05e-76!86;UBERON:0002616!1.89e-71!59;UBERON:0002619!5.33e-66!22;UBERON:0000955!5.68e-66!69;UBERON:0006238!5.68e-66!69;UBERON:0002780!4.54e-64!41;UBERON:0001890!4.54e-64!41;UBERON:0006240!4.54e-64!41;UBERON:0001893!2.73e-63!34;UBERON:0002020!6.00e-63!34;UBERON:0003528!6.00e-63!34;UBERON:0001869!1.02e-62!32;UBERON:0003080!2.18e-62!42;UBERON:0001950!2.37e-60!20;UBERON:0002791!2.60e-60!33;UBERON:0000956!1.13e-57!25;UBERON:0000203!1.13e-57!25;UBERON:0003075!2.80e-57!86;UBERON:0007284!2.80e-57!86;UBERON:0002346!2.72e-54!90;UBERON:0007023!2.20e-47!115;UBERON:0003056!1.18e-43!61;UBERON:0004121!9.91e-39!169;UBERON:0000924!1.41e-37!173;UBERON:0006601!1.41e-37!173;UBERON:0000033!6.25e-37!123;UBERON:0000153!9.44e-35!129;UBERON:0007811!9.44e-35!129;UBERON:0000200!1.97e-20!6;UBERON:0003076!3.21e-20!15;UBERON:0003057!3.21e-20!15;UBERON:0001871!3.67e-20!7;UBERON:0000025!1.06e-19!194;UBERON:0002021!1.89e-17!5;UBERON:0004733!7.40e-17!12;UBERON:0002028!7.40e-17!12;UBERON:0007277!7.40e-17!12;UBERON:0001872!1.24e-16!5;UBERON:0000349!1.72e-16!5;UBERON:0004111!9.84e-16!241;UBERON:0004732!1.90e-15!13;UBERON:0000477!2.78e-13!286;UBERON:0002680!3.00e-13!9;UBERON:0001895!3.00e-13!9;UBERON:0010092!3.00e-13!9;UBERON:0000483!1.71e-11!309;UBERON:0000119!2.79e-11!312;UBERON:0002771!4.97e-11!3;UBERON:0000064!1.10e-10!219;UBERON:0000988!3.22e-10!3;UBERON:0002298!6.94e-10!8;UBERON:0002420!3.81e-09!9;UBERON:0007245!3.81e-09!9;UBERON:0010009!3.81e-09!9;UBERON:0010011!3.81e-09!9;UBERON:0000454!3.81e-09!9;UBERON:0002308!1.20e-08!9;UBERON:0000125!1.20e-08!9;UBERON:0000475!3.64e-08!365;UBERON:0000369!5.02e-08!4;UBERON:0002435!5.02e-08!4;UBERON:0000204!5.02e-08!4;UBERON:0010082!5.02e-08!4;UBERON:0001870!6.34e-08!2;UBERON:0001876!7.02e-08!2;UBERON:0000481!8.85e-08!347;UBERON:0001954!3.40e-07!2;UBERON:0003022!3.40e-07!2;UBERON:0002421!3.40e-07!2;UBERON:0002600!3.40e-07!2;UBERON:0001897!3.62e-07!2;UBERON:0002148!6.19e-07!2;UBERON:0009662!6.19e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.06e-82;20!UBERON:0002619;5.91e-75;22!UBERON:0000956;6.45e-66;25!UBERON:0000203;6.45e-66;25!UBERON:0001869;9.90e-61;32!UBERON:0001893;1.74e-57;34!UBERON:0002791;1.23e-56;32!UBERON:0003528;1.13e-52;34!UBERON:0002020;1.13e-52;34!UBERON:0000073;7.84e-39;53!UBERON:0002616;7.84e-39;53!UBERON:0000200;5.56e-37;6!UBERON:0002780;2.01e-34;41!UBERON:0001890;2.01e-34;41!UBERON:0002021;1.22e-31;5!UBERON:0000955;2.26e-27;68!UBERON:0001016;1.62e-23;83!UBERON:0001017;2.14e-23;75!UBERON:0001871;4.74e-22;6!UBERON:0001870;5.63e-19;3!UBERON:0002771;1.01e-13;2!UBERON:0004733;1.81e-13;12!UBERON:0002028;1.81e-13;12!UBERON:0001876;3.06e-13;2!UBERON:0002702;3.06e-13;2!UBERON:0004732;2.04e-12;13!UBERON:0001872;4.93e-12;5!UBERON:0002680;5.06e-12;9!UBERON:0001895;5.06e-12;9!UBERON:0000349;1.30e-11;5!UBERON:0002420;4.25e-11;9!UBERON:0007245;4.25e-11;9!UBERON:0010009;4.25e-11;9!UBERON:0010011;4.25e-11;9!UBERON:0000454;4.25e-11;9!UBERON:0002037;1.22e-10;6!UBERON:0011216;6.53e-10;132!UBERON:0007023;1.18e-09;114!UBERON:0002581;8.01e-08;1!UBERON:0002902;8.01e-08;1!UBERON:0002022;8.01e-08;1!UBERON:0009899;8.01e-08;1!UBERON:0001882;1.85e-07;1!UBERON:0001874;1.85e-07;1!UBERON:0007190;1.85e-07;1!UBERON:0005403;1.85e-07;1!UBERON:0000369;4.75e-07;4!UBERON:0002435;4.75e-07;4!UBERON:0000204;4.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.84e-82,20;UBERON:0002619,5.34e-75,22;UBERON:0001869,1.92e-71,32;UBERON:0000073,6.09e-68,53;UBERON:0002616,6.09e-68,53;UBERON:0001893,3.91e-67,34;UBERON:0000956,5.90e-66,25;UBERON:0000203,5.90e-66,25;UBERON:0002791,2.48e-64,32;UBERON:0001049,4.05e-64,56;UBERON:0005068,4.05e-64,56;UBERON:0006241,4.05e-64,56;UBERON:0007135,4.05e-64,56;UBERON:0003528,1.94e-60,34;UBERON:0002020,1.94e-60,34;UBERON:0000955,2.27e-60,68;UBERON:0006238,2.27e-60,68;UBERON:0001016,3.55e-56,89;UBERON:0002780,2.78e-55,41;UBERON:0001890,2.78e-55,41;UBERON:0003080,2.78e-55,41;UBERON:0006240,2.78e-55,41;UBERON:0001017,3.82e-54,81;UBERON:0003075,1.50e-42,82;UBERON:0007284,1.50e-42,82;UBERON:0002346,2.24e-40,86;UBERON:0000200,4.49e-37,6;UBERON:0003056,3.74e-36,61;UBERON:0010371,1.24e-32,104;UBERON:0002021,1.92e-31,5;UBERON:0004121,2.92e-27,171;UBERON:0000924,2.92e-27,171;UBERON:0006601,2.92e-27,171;UBERON:0007023,3.51e-27,114;UBERON:0010314,9.63e-25,132;UBERON:0001871,2.44e-22,6;UBERON:0011216,2.43e-21,223;UBERON:0001870,4.54e-19,3;UBERON:0000025,1.58e-15,192;UBERON:0002771,8.65e-14,2;UBERON:0001876,1.98e-13,2;UBERON:0004733,2.01e-13,12;UBERON:0002028,2.01e-13,12;UBERON:0007277,2.01e-13,12;UBERON:0002702,3.71e-13,2;UBERON:0004732,2.25e-12,13;UBERON:0002680,4.60e-12,9;UBERON:0001895,4.60e-12,9;UBERON:0010092,4.60e-12,9;UBERON:0001872,6.79e-12,5;UBERON:0000349,8.49e-12,5;UBERON:0004111,1.88e-11,240;UBERON:0002420,3.17e-11,9;UBERON:0007245,3.17e-11,9;UBERON:0010009,3.17e-11,9;UBERON:0010011,3.17e-11,9;UBERON:0000454,3.17e-11,9;UBERON:0003076,1.08e-10,15;UBERON:0003057,1.08e-10,15;UBERON:0002037,1.23e-10,6;UBERON:0006215,1.23e-10,6;UBERON:0000483,6.32e-08,306;UBERON:0002581,6.80e-08,1;UBERON:0002902,7.26e-08,1;UBERON:0009899,7.26e-08,1;UBERON:0002022,8.28e-08,1;UBERON:0000119,8.42e-08,309;UBERON:0001882,1.39e-07,1;UBERON:0005403,1.39e-07,1;UBERON:0007190,1.69e-07,1;UBERON:0001874,1.91e-07,1;UBERON:0000369,4.20e-07,4;UBERON:0002435,4.20e-07,4;UBERON:0000204,4.20e-07,4;UBERON:0010082,4.20e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.40669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.29875337426592,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.60298219312704,18.30980835805,13.3800904516782,11.8219047581419,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.937057782901357,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83601308272048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,2.30848315300494,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,4.14889300666675,1.251909307065,0,1.22021956690538,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,1.29389773676018,0,7.64467467344097,0,0,0,0,0,0,0,0,0,1.79841830270087,5.6678630530234,1.27707087245721,1.43581454968528,2.01657356977374,2.55881834117606,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55336444622308,0.781078098613847,0.620060389503552,2.15613754659283,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,2.71878931907327,2.69668371607681,0,0,0.078493092850514,1.41404030924402,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,1.8357702351547,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.40669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.29875337426592,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.60298219312704,18.30980835805,13.3800904516782,11.8219047581419,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.937057782901357,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83601308272048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,2.30848315300494,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,4.14889300666675,1.251909307065,0,1.22021956690538,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,1.29389773676018,0,7.64467467344097,0,0,0,0,0,0,0,0,0,1.79841830270087,5.6678630530234,1.27707087245721,1.43581454968528,2.01657356977374,2.55881834117606,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55336444622308,0.781078098613847,0.620060389503552,2.15613754659283,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,2.71878931907327,2.69668371607681,0,0,0.078493092850514,1.41404030924402,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,1.8357702351547,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p9@GARNL3 | |||
}} | }} |
Latest revision as of 03:58, 25 September 2015
Short description: | p9@GARNL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GARNL3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -42bp_to_ENST00000373386_5end |
EntrezGene: | GARNL3 |
HGNC: | 25425 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data