FFCP PHASE1:Hg19::chr8:23127644..23127669,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:23127644..23127669,+ to FFCP PHASE1:Hg19::chr8:23127644..23127669,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=203069 | |EntrezGene=203069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27329 | |HGNC=27329 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000517633_5end | |||
|cluster_id=chr8:23127644..23127669,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_R3HCC1_5end | |||
|id=chr8:23127644..23127669,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.04e-14;3!UBERON:0003057;1.04e-14;3!UBERON:0006601;8.84e-13;82!UBERON:0005425;8.62e-12;1!UBERON:0006222;3.63e-11;1!UBERON:0002532;1.83e-07;206!UBERON:0010316;1.83e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.20e-97!57;UBERON:0005068!1.20e-97!57;UBERON:0006241!1.20e-97!57;UBERON:0007135!1.20e-97!57;UBERON:0002616!1.04e-82!59;UBERON:0000955!2.74e-78!69;UBERON:0006238!2.74e-78!69;UBERON:0001017!8.91e-74!82;UBERON:0002780!1.07e-72!41;UBERON:0001890!1.07e-72!41;UBERON:0006240!1.07e-72!41;UBERON:0003080!7.16e-71!42;UBERON:0005743!4.22e-70!86;UBERON:0002020!3.05e-68!34;UBERON:0003528!3.05e-68!34;UBERON:0001893!6.40e-68!34;UBERON:0000073!6.72e-67!94;UBERON:0001016!6.72e-67!94;UBERON:0002791!6.36e-64!33;UBERON:0003075!8.67e-63!86;UBERON:0007284!8.67e-63!86;UBERON:0007023!1.02e-61!115;UBERON:0002346!1.01e-59!90;UBERON:0001869!2.17e-59!32;UBERON:0003056!2.23e-47!61;UBERON:0000033!4.29e-44!123;UBERON:0002308!2.12e-43!9;UBERON:0000125!2.12e-43!9;UBERON:0000153!9.52e-42!129;UBERON:0007811!9.52e-42!129;UBERON:0002619!8.66e-38!22;UBERON:0001950!6.27e-36!20;UBERON:0004121!1.41e-34!169;UBERON:0009663!1.01e-33!7;UBERON:0000924!1.27e-33!173;UBERON:0006601!1.27e-33!173;UBERON:0000956!4.41e-33!25;UBERON:0000203!4.41e-33!25;UBERON:0002298!3.50e-31!8;UBERON:0003076!2.27e-26!15;UBERON:0003057!2.27e-26!15;UBERON:0002420!4.86e-26!9;UBERON:0007245!4.86e-26!9;UBERON:0010009!4.86e-26!9;UBERON:0010011!4.86e-26!9;UBERON:0000454!4.86e-26!9;UBERON:0004732!3.35e-24!13;UBERON:0000025!4.31e-24!194;UBERON:0004733!4.36e-20!12;UBERON:0002028!4.36e-20!12;UBERON:0007277!4.36e-20!12;UBERON:0000200!1.05e-19!6;UBERON:0000369!2.07e-19!4;UBERON:0002435!2.07e-19!4;UBERON:0000204!2.07e-19!4;UBERON:0010082!2.07e-19!4;UBERON:0004111!5.12e-18!241;UBERON:0001896!1.97e-16!3;UBERON:0006331!1.97e-16!3;UBERON:0005290!1.97e-16!3;UBERON:0010096!1.97e-16!3;UBERON:0000988!4.02e-16!3;UBERON:0001872!9.78e-16!5;UBERON:0000477!3.61e-15!286;UBERON:0002771!4.83e-15!3;UBERON:0005383!5.07e-15!3;UBERON:0005382!5.07e-15!3;UBERON:0000064!1.23e-13!219;UBERON:0000483!1.77e-12!309;UBERON:0000119!2.74e-12!312;UBERON:0000475!3.67e-12!365;UBERON:0005162!1.55e-11!2;UBERON:0000122!1.55e-11!2;UBERON:0001897!1.81e-11!2;UBERON:0002148!2.01e-11!2;UBERON:0009662!2.01e-11!2;UBERON:0001875!4.30e-11!2;UBERON:0006514!4.30e-11!2;UBERON:0001873!1.64e-10!2;UBERON:0010122!1.64e-10!2;UBERON:0001871!8.78e-10!7;UBERON:0002021!1.94e-09!5;UBERON:0002680!3.81e-09!9;UBERON:0001895!3.81e-09!9;UBERON:0010092!3.81e-09!9;UBERON:0002240!4.75e-08!3;UBERON:0000062!6.79e-08!511;UBERON:0001894!3.47e-07!7;UBERON:0006222!3.47e-07!7;UBERON:0000941!9.91e-07!1;UBERON:0004904!9.91e-07!1;UBERON:0002464!9.91e-07!1;UBERON:0001021!9.91e-07!1;UBERON:0001785!9.91e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.87e-59;6!UBERON:0004732;3.41e-37;13!UBERON:0001896;5.72e-31;3!UBERON:0005290;5.72e-31;3!UBERON:0000988;2.61e-30;3!UBERON:0004733;1.25e-29;12!UBERON:0002028;1.25e-29;12!UBERON:0000125;1.25e-27;9!UBERON:0002308;1.25e-27;9!UBERON:0000073;1.39e-24;53!UBERON:0002616;1.39e-24;53!UBERON:0005162;2.30e-21;2!UBERON:0000122;2.30e-21;2!UBERON:0001897;4.47e-21;2!UBERON:0002148;4.47e-21;2!UBERON:0006331;4.47e-21;2!UBERON:0009662;4.47e-21;2!UBERON:0010225;4.47e-21;2!UBERON:0001875;1.74e-20;2!UBERON:0006514;1.74e-20;2!UBERON:0001017;6.62e-18;75!UBERON:0001016;2.13e-15;83!UBERON:0002240;1.04e-14;3!UBERON:0005174;1.04e-14;3!UBERON:0001137;1.04e-14;3!UBERON:0000955;2.62e-14;68!UBERON:0001894;2.02e-13;7!UBERON:0009663;2.06e-13;7!UBERON:0002780;5.95e-13;41!UBERON:0001890;5.95e-13;41!UBERON:0000941;8.62e-12;1!UBERON:0001785;8.62e-12;1!UBERON:0002464;8.62e-12;1!UBERON:0004904;8.62e-12;1!UBERON:0001021;8.62e-12;1!UBERON:0002038;9.57e-12;1!UBERON:0009661;9.57e-12;1!UBERON:0002950;9.57e-12;1!UBERON:0001891;9.57e-12;1!UBERON:0002336;2.42e-11;1!UBERON:0011215;2.42e-11;1!UBERON:0001018;2.42e-11;1!UBERON:0002473;2.42e-11;1!UBERON:0005340;2.42e-11;1!UBERON:0003544;2.42e-11;1!UBERON:0005970;2.42e-11;1!UBERON:0002316;2.42e-11;1!UBERON:0001020;2.42e-11;1!UBERON:0002437;2.42e-11;1!UBERON:0007023;2.66e-11;114!UBERON:0002784;5.05e-11;4!UBERON:0002420;1.48e-10;9!UBERON:0007245;1.48e-10;9!UBERON:0010009;1.48e-10;9!UBERON:0010011;1.48e-10;9!UBERON:0000454;1.48e-10;9!UBERON:0002680;1.60e-10;9!UBERON:0001895;1.60e-10;9!UBERON:0003528;8.46e-10;34!UBERON:0002020;8.46e-10;34!UBERON:0001893;3.10e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.53e-59,6;UBERON:0001049,6.42e-48,56;UBERON:0005068,6.42e-48,56;UBERON:0006241,6.42e-48,56;UBERON:0007135,6.42e-48,56;UBERON:0003076,5.66e-42,15;UBERON:0003057,5.66e-42,15;UBERON:0001016,1.10e-40,89;UBERON:0001017,1.29e-40,81;UBERON:0000073,5.36e-39,53;UBERON:0002616,5.36e-39,53;UBERON:0000955,2.22e-38,68;UBERON:0006238,2.22e-38,68;UBERON:0004732,3.06e-37,13;UBERON:0003075,2.14e-36,82;UBERON:0007284,2.14e-36,82;UBERON:0002346,1.30e-34,86;UBERON:0007023,2.32e-32,114;UBERON:0001896,5.44e-31,3;UBERON:0005290,5.44e-31,3;UBERON:0010096,5.44e-31,3;UBERON:0000988,2.24e-30,3;UBERON:0004733,1.14e-29,12;UBERON:0002028,1.14e-29,12;UBERON:0007277,1.14e-29,12;UBERON:0010371,2.92e-28,104;UBERON:0000125,1.44e-27,9;UBERON:0002308,1.44e-27,9;UBERON:0010314,8.72e-22,132;UBERON:0005162,2.83e-21,2;UBERON:0000122,2.83e-21,2;UBERON:0001897,3.84e-21,2;UBERON:0010225,3.84e-21,2;UBERON:0002148,4.70e-21,2;UBERON:0006331,4.70e-21,2;UBERON:0009662,4.70e-21,2;UBERON:0001875,2.12e-20,2;UBERON:0006514,2.12e-20,2;UBERON:0004121,2.53e-20,171;UBERON:0000924,2.53e-20,171;UBERON:0006601,2.53e-20,171;UBERON:0002780,7.57e-18,41;UBERON:0001890,7.57e-18,41;UBERON:0003080,7.57e-18,41;UBERON:0006240,7.57e-18,41;UBERON:0011216,5.87e-15,223;UBERON:0002240,1.08e-14,3;UBERON:0005174,1.08e-14,3;UBERON:0001137,1.08e-14,3;UBERON:0003056,1.38e-14,61;UBERON:0001894,1.89e-13,7;UBERON:0006222,1.89e-13,7;UBERON:0009663,2.24e-13,7;UBERON:0003528,3.66e-13,34;UBERON:0002020,3.66e-13,34;UBERON:0000025,2.02e-12,192;UBERON:0000941,8.62e-12,1;UBERON:0001785,8.62e-12,1;UBERON:0002464,8.62e-12,1;UBERON:0004904,8.62e-12,1;UBERON:0001021,8.62e-12,1;UBERON:0003902,8.62e-12,1;UBERON:0005425,8.62e-12,1;UBERON:0002038,9.57e-12,1;UBERON:0009661,9.57e-12,1;UBERON:0002950,9.57e-12,1;UBERON:0001891,9.57e-12,1;UBERON:0009616,9.57e-12,1;UBERON:0010286,9.57e-12,1;UBERON:0002336,2.96e-11,1;UBERON:0011215,2.96e-11,1;UBERON:0001018,2.96e-11,1;UBERON:0002473,2.96e-11,1;UBERON:0005340,2.96e-11,1;UBERON:0003544,2.96e-11,1;UBERON:0005970,2.96e-11,1;UBERON:0002316,2.96e-11,1;UBERON:0001020,2.96e-11,1;UBERON:0002437,2.96e-11,1;UBERON:0002784,4.68e-11,4;UBERON:0002680,1.53e-10,9;UBERON:0001895,1.53e-10,9;UBERON:0010092,1.53e-10,9;UBERON:0002420,1.58e-10,9;UBERON:0007245,1.58e-10,9;UBERON:0010009,1.58e-10,9;UBERON:0010011,1.58e-10,9;UBERON:0000454,1.58e-10,9;UBERON:0001893,9.91e-10,34;UBERON:0004111,2.01e-09,240;UBERON:0000483,6.45e-08,306;UBERON:0000119,8.20e-08,309;UBERON:0002791,2.37e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,1.57705766875147,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17887024480198,0,2.81117334870407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,3.42263447229983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39562051629272,5.81823447667836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.625954653532499,6.88091034828085,7.2103883498954,4.59513381766237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,1.59633859057151,0.615349092722265,0,0.760729777106397,0.161475645631851,21.4154130388732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,1.56215619722769,0.620060389503552,0.824405532520789,0,0,0,0,0,0,0,0,0,0,0,0,1.69924332442079,0.131545547125698,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06710481613803,8.31729920915841,0,0,0,0,0,0,0,0,0,0,12.1838645678734,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,5.80418607621146,4.86135080550908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,1.57705766875147,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17887024480198,0,2.81117334870407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,3.42263447229983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39562051629272,5.81823447667836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.625954653532499,6.88091034828085,7.2103883498954,4.59513381766237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,1.59633859057151,0.615349092722265,0,0.760729777106397,0.161475645631851,21.4154130388732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,1.56215619722769,0.620060389503552,0.824405532520789,0,0,0,0,0,0,0,0,0,0,0,0,1.69924332442079,0.131545547125698,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06710481613803,8.31729920915841,0,0,0,0,0,0,0,0,0,0,12.1838645678734,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,5.80418607621146,4.86135080550908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@R3HCC1 | |||
}} | }} |
Latest revision as of 13:31, 17 September 2015
Short description: | p2@R3HCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_R3HCC1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 11bp_to_ENST00000517633_5end |
EntrezGene: | R3HCC1 |
HGNC: | 27329 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data