FFCP PHASE1:Hg19::chr7:100201080..100201091,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100201080..100201091,+ to FFCP PHASE1:Hg19::chr7:100201080..100201091,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5118 | |EntrezGene=5118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8738 | |HGNC=8738 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=294bp_to_ENST00000462260_5end | |||
|cluster_id=chr7:100201080..100201091,+ | |||
|coexpression_cluster_id=C1982 | |||
|description=CAGE_peak_12_at_PCOLCE_5end | |||
|id=chr7:100201080..100201091,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.65e-41!180;CL:0000057!7.90e-25!75;CL:0000680!1.62e-14!57;CL:0000056!1.62e-14!57;CL:0000355!1.62e-14!57;CL:0000183!5.14e-14!59;CL:0000048!1.78e-13!430;CL:0000187!2.12e-13!54;CL:0002620!4.67e-13!23;CL:0000723!1.29e-12!436;CL:0000393!3.95e-12!60;CL:0000211!3.95e-12!60;CL:0000034!7.55e-12!444;CL:0000192!1.06e-09!42;CL:0000514!1.06e-09!42;CL:0002371!1.08e-08!591;CL:0002334!2.04e-07!12;CL:0002320!5.43e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.28e-15;23!CL:0000723;7.38e-11;61!CL:0000134;1.37e-10;55!CL:0000048;1.33e-09;58!CL:0002320;1.94e-09;188!CL:0000057;1.23e-08;73!CL:0002570;1.39e-08;8!CL:0000034;5.50e-08;69!CL:0002552;1.69e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.39e-25,76;CL:0000048,5.56e-18,427;CL:0000723,2.53e-17,433;CL:0000034,1.79e-16,441;CL:0002620,3.80e-15,23;CL:0002320,3.11e-14,361;CL:0000134,1.54e-10,354;CL:0000680,5.51e-09,58;CL:0000056,5.51e-09,58;CL:0000355,5.51e-09,58;CL:0000187,7.39e-09,55;CL:0002570,1.37e-08,8;CL:0000219,3.24e-08,386;CL:0000393,2.15e-07,61;CL:0000211,2.15e-07,61;CL:0002552,2.84e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.24e-19!83;UBERON:0002329!1.24e-19!83;UBERON:0003077!1.24e-19!83;UBERON:0003059!1.24e-19!83;UBERON:0007282!1.24e-19!83;UBERON:0009618!1.24e-19!83;UBERON:0007285!1.24e-19!83;UBERON:0004290!3.28e-17!70;UBERON:0001134!2.80e-14!61;UBERON:0002036!2.80e-14!61;UBERON:0003082!2.80e-14!61;UBERON:0000486!4.03e-14!82;UBERON:0002385!2.40e-13!63;UBERON:0001015!2.40e-13!63;UBERON:0000383!2.40e-13!63;UBERON:0003102!3.07e-12!95;UBERON:0002199!4.41e-11!45;UBERON:0002416!4.41e-11!45;UBERON:0005256!1.13e-10!143;UBERON:0002097!4.59e-09!40;UBERON:0000475!1.64e-07!365;UBERON:0002384!4.16e-07!375;UBERON:0001013!7.19e-07!14;UBERON:0002100!9.92e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.56e-11;14!UBERON:0004905;7.26e-11;8!UBERON:0000982;7.26e-11;8!UBERON:0004770;7.26e-11;8!UBERON:0002204;3.35e-10;70!UBERON:0002199;1.01e-09;46!UBERON:0002416;1.01e-09;46!UBERON:0011135;1.61e-09;5!UBERON:0002216;1.61e-09;5!UBERON:0011134;1.61e-09;5!UBERON:0002209;1.61e-09;5!UBERON:0002213;1.61e-09;5!UBERON:0007844;1.61e-09;5!UBERON:0011138;1.61e-09;5!UBERON:0001130;1.61e-09;5!UBERON:0001066;1.61e-09;5!UBERON:0001468;1.61e-09;5!UBERON:0000075;8.29e-09;16!UBERON:0002384;1.17e-08;198!UBERON:0002097;2.60e-08;41!UBERON:0003102;3.04e-08;50!UBERON:0001434;3.13e-08;36!UBERON:0004765;9.60e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.68e-15,99;UBERON:0002199,1.49e-14,46;UBERON:0002416,1.49e-14,46;UBERON:0002384,2.56e-14,371;UBERON:0007524,6.02e-12,73;UBERON:0001013,1.39e-11,14;UBERON:0002329,2.29e-11,71;UBERON:0003059,2.29e-11,71;UBERON:0007282,2.29e-11,71;UBERON:0004290,2.29e-11,71;UBERON:0009618,2.29e-11,71;UBERON:0002097,3.62e-11,41;UBERON:0003077,4.31e-11,72;UBERON:0007285,4.31e-11,72;UBERON:0004905,7.67e-11,8;UBERON:0000982,7.67e-11,8;UBERON:0004770,7.67e-11,8;UBERON:0000486,2.06e-10,83;UBERON:0007503,1.32e-09,78;UBERON:0011135,1.79e-09,5;UBERON:0002216,1.79e-09,5;UBERON:0011134,1.79e-09,5;UBERON:0002209,1.79e-09,5;UBERON:0002213,1.79e-09,5;UBERON:0005856,1.79e-09,5;UBERON:0005866,1.79e-09,5;UBERON:0005863,1.79e-09,5;UBERON:0007844,1.79e-09,5;UBERON:0011138,1.79e-09,5;UBERON:0001130,1.79e-09,5;UBERON:0001066,1.79e-09,5;UBERON:0001468,1.79e-09,5;UBERON:0001134,6.83e-09,62;UBERON:0002036,6.83e-09,62;UBERON:0003082,6.83e-09,62;UBERON:0000075,1.12e-08,16;UBERON:0002385,2.09e-08,64;UBERON:0001015,2.09e-08,64;UBERON:0000383,2.09e-08,64;UBERON:0002204,2.45e-07,167 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.281908808191942,0,0.446961094427288,3.48935409640147,5.06599756336621,0,2.35067065379855,0,0,0,0,4.08428964768154,6.2965501388304,2.01697543935533,1.20538905604795,2.92124036154949,1.95173119516203,0,0.612002073732759,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,1.0843174571537,0.50133791063589,3.47631645505977,0,1.94653948121054,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.759783069987479,0,12.333974692199,2.83734705758686,3.36406560085384,0,0.49333509683432,0.311211035399766,0.134710672069688,1.63461903113459,1.21085942115945,5.76175924479999,0,2.49728061464256,0,1.49448680551801,0.939475989150119,1.45685649931318,0.702254033511242,1.02077085627447,1.47401180774122,3.61640234115179,1.18800285728205,5.19260551484969,0,1.43723628363248,0.841680569770331,1.00094815897571,0,1.31693286264251,2.75839016219118,3.60571341375832,0.907457465280168,3.7671823494661,2.34913127700424,0.211931901159562,5.10154863343484,2.37020817248409,2.83404594050192,1.30281799432113,1.68776332241266,1.94874010322397,2.27190396819703,0.828449087780694,4.52608959092673,6.39017266529906,1.10827308050404,1.18692414617341,0,0,0,0,0,0.232387885739037,0,0,0,3.12899064659632,9.64861407289328,0,3.25057549622385,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0.336393253036082,0,0.7333828582095,0.387815147273333,14.3062578340753,1.690605505112,2.12750493267896,1.04007436911366,1.54324424557285,0,1.0656887160644,0.285955987316295,3.7983512377401,2.46972101034231,0,0,3.16780749173372,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0.289562613335158,1.84928690295345,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,8.34302143690151,6.00204625271613,5.15403545029498,1.45579603071565,3.21172179834891,1.89242898040722,1.40569697991256,0.300946099727719,4.5481500811197,3.10419213877515,1.32845119707087,0.737476674166813,0.781952530212746,1.76221041716467,4.80400793335198,0,0,0,0,0,0.30239029332968,0.248107807818777,0.61384789315225,1.40330047216537,0.128139149255701,0.511707249066704,0.160853921143607,2.96836132889982,2.62156479464514,3.37367278094941,0.574890092096664,5.19254429183621,2.32420756919918,0.120859449591622,0,0,1.49258782613989,0.546273504020151,2.49136388422906,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,1.64825036673018,0.41254749960294,0,0,0,0.773365746336976,1.69453478826109,1.22802939780904,1.37836572484531,1.93356440762893,3.48040065394148,1.19317278382541,0.356128142586949,0,0,0,0,0,5.35180989612088,0,1.23213432070436,0,0.869932992075073,1.11194531462352,0,0.372158369359667,0.632758849437452,0.190630193923825,0,2.56763392820352,1.90921948755562,0.78494864019923,0.899362287916574,2.47083326762449,0.824686816419805,0.404364963146632,0,2.10629228119491,0,0.487426979262569,0,1.09199929126389,1.55545975149084,4.52032466480971,0,0.66343897524122,0,1.73632660280006,7.21484227251296,0,0.6196469961995,1.12678241012897,0.717056761020258,0.88424136911809,0,3.19284957663538,6.96655196482292,5.26871828735843,0.379473173765715,1.74967360122491,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.538651809526579,0,0,0,0,0,1.09917112082235,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0.61214552326098,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0.171986032471617,0,0,0,0,0,1.58186518546373,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0.137539436597234,0.83088067605837,0,0,0,0,0,0.262272940674991,0,0,0,1.42939065274673,0,0,0,0,0.326587360109409,0,0,1.02232813071253,0.226624183040251,0.732761168390412,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,1.64180283175561,3.27198633786114,1.10961172300523,4.54567212660214,3.27038272278348,9.7879234375619,1.83072054717539,2.57092570397506,2.02068360757615,1.33069634990671,0.318593534327405,0.449803112163605,1.08684069813382,1.24411862352257,0.797525143673985,1.5652351854352,0,0,0.4068707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| ||
|short_description=p12@PCOLCE | |||
}} | }} |
Latest revision as of 07:42, 20 September 2015
Short description: | p12@PCOLCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PCOLCE_5end |
Coexpression cluster: | C1982_Fibroblast_Mesenchymal_tenocyte_Hair_normal_Synoviocyte_mesenchymal |
Association with transcript: | 294bp_to_ENST00000462260_5end |
EntrezGene: | PCOLCE |
HGNC: | 8738 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.39e-25 | 76 |
multi fate stem cell | 5.56e-18 | 427 |
somatic stem cell | 2.53e-17 | 433 |
stem cell | 1.79e-16 | 441 |
skin fibroblast | 3.80e-15 | 23 |
connective tissue cell | 3.11e-14 | 361 |
mesenchymal cell | 1.54e-10 | 354 |
muscle precursor cell | 5.51e-09 | 58 |
myoblast | 5.51e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.51e-09 | 58 |
muscle cell | 7.39e-09 | 55 |
mesenchymal stem cell of adipose | 1.37e-08 | 8 |
motile cell | 3.24e-08 | 386 |
electrically responsive cell | 2.15e-07 | 61 |
electrically active cell | 2.15e-07 | 61 |
fibroblast of gingiva | 2.84e-07 | 5 |