FFCP PHASE1:Hg19::chr6:8652489..8652515,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr6:8652489..8652515,+ to FFCP PHASE1:Hg19::chr6:8652489..8652515,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=728655 | |EntrezGene=728655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=34232 | |HGNC=34232 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_NR_004855,uc003myf.2_5end | |||
|cluster_id=chr6:8652489..8652515,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_HULC_5end | |||
|id=chr6:8652489..8652515,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.23e-29!12;CL:0000417!2.23e-29!12;CL:0000668!2.23e-29!12;CL:0000414!2.23e-29!12;CL:0000412!2.23e-29!12;CL:0000182!2.23e-29!12;CL:0000223!1.62e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.10e-53;12!CL:0002563;5.19e-14;4!CL:0002253;8.04e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.06e-53,12;CL:0000223,1.09e-21,58;CL:0002563,5.37e-14,4;CL:0002253,8.04e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.99e-43;11!UBERON:0009497;3.17e-36;13!UBERON:0003104;1.86e-20;31!UBERON:0001041;1.34e-15;30!CL:0000223;7.14e-14;58 | |||
|ontology_enrichment_disease=DOID:0050619!6.99e-07!1;DOID:1357!6.99e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!4.00e-30!25;UBERON:0000015!4.00e-30!25;UBERON:0002423!4.00e-30!25;UBERON:0006235!4.00e-30!25;UBERON:0004161!4.00e-30!25;UBERON:0002107!2.51e-28!19;UBERON:0006925!2.51e-28!19;UBERON:0008836!2.51e-28!19;UBERON:0008835!3.31e-24!22;UBERON:0003894!3.31e-24!22;UBERON:0003929!3.50e-23!54;UBERON:0009854!4.51e-23!23;UBERON:0007499!4.48e-21!25;UBERON:0005057!3.42e-20!26;UBERON:0009856!3.42e-20!26;UBERON:0002368!1.36e-17!35;UBERON:0002365!1.25e-16!31;UBERON:0002330!1.25e-16!31;UBERON:0005911!4.55e-14!82;UBERON:0000949!3.37e-13!45;UBERON:0005172!2.35e-12!55;UBERON:0005173!2.35e-12!55;UBERON:0002530!1.84e-11!59;UBERON:0002417!6.66e-11!61;UBERON:0000916!6.66e-11!61;UBERON:0002110!5.07e-08!3;UBERON:0006242!5.07e-08!3;UBERON:0001007!1.02e-07!155;UBERON:0001555!1.02e-07!155;UBERON:0007026!1.02e-07!155;UBERON:0002294!1.93e-07!7;UBERON:0001173!1.93e-07!7;UBERON:0004912!1.93e-07!7;UBERON:0000490!5.42e-07!138;UBERON:0001764!6.99e-07!1;UBERON:0001825!6.99e-07!1;UBERON:0001282!8.27e-07!1;UBERON:0009842!8.27e-07!1;UBERON:0003704!8.27e-07!1;UBERON:0001171!8.27e-07!1;UBERON:0001172!8.27e-07!1;UBERON:0004119!8.87e-07!169;UBERON:0000925!8.87e-07!169;UBERON:0006595!8.87e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.27e-55;19!UBERON:0006925;1.27e-55;19!UBERON:0002423;4.17e-42;25!UBERON:0002368;5.16e-36;33!UBERON:0002365;8.75e-33;31!UBERON:0002330;8.75e-33;31!UBERON:0000949;6.74e-25;43!UBERON:0002530;6.79e-15;57!UBERON:0001242;5.19e-14;4!UBERON:0001262;5.19e-14;4!UBERON:0004786;5.19e-14;4!UBERON:0004808;5.19e-14;4!UBERON:0001277;5.19e-14;4!UBERON:0005172;1.36e-12;52!UBERON:0005173;1.36e-12;52!UBERON:0002417;1.11e-11;58!UBERON:0000916;1.11e-11;58!UBERON:0001007;4.33e-11;81!UBERON:0000485;2.11e-08;7!UBERON:0003929;2.11e-08;7!UBERON:0003350;1.85e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.23e-55,19;UBERON:0006925,1.23e-55,19;UBERON:0008836,1.23e-55,19;UBERON:0008835,5.88e-48,22;UBERON:0003894,5.88e-48,22;UBERON:0009854,7.68e-46,23;UBERON:0007499,4.07e-42,25;UBERON:0009497,4.07e-42,25;UBERON:0000015,4.07e-42,25;UBERON:0002423,4.07e-42,25;UBERON:0006235,4.07e-42,25;UBERON:0004161,4.07e-42,25;UBERON:0009856,1.81e-40,26;UBERON:0003929,8.73e-40,54;UBERON:0002368,9.50e-37,35;UBERON:0002365,8.05e-34,31;UBERON:0002330,8.05e-34,31;UBERON:0000949,2.26e-28,45;UBERON:0002530,6.70e-26,59;UBERON:0005911,9.20e-26,82;UBERON:0005172,4.62e-19,54;UBERON:0005173,4.62e-19,54;UBERON:0002417,4.58e-17,60;UBERON:0000916,4.58e-17,60;UBERON:0004921,1.15e-14,118;UBERON:0001242,5.37e-14,4;UBERON:0001262,5.37e-14,4;UBERON:0004786,5.37e-14,4;UBERON:0004808,5.37e-14,4;UBERON:0001277,5.37e-14,4;UBERON:0001007,7.54e-14,145;UBERON:0001555,7.54e-14,145;UBERON:0007026,7.54e-14,145;UBERON:0000490,1.22e-13,148;UBERON:0004119,2.03e-12,160;UBERON:0000925,2.03e-12,160;UBERON:0006595,2.03e-12,160;UBERON:0001041,1.78e-11,87;UBERON:0005256,8.86e-10,122;UBERON:0005177,9.49e-10,101;UBERON:0003104,9.27e-09,160;UBERON:0009142,9.27e-09,160;UBERON:0009569,1.08e-08,112;UBERON:0003914,2.81e-08,117;UBERON:0003350,1.88e-07,8;UBERON:0001048,3.64e-07,160;UBERON:0011216,5.51e-07,223 | |||
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|short_description=p1@HULC | |||
}} | }} |
Latest revision as of 01:41, 20 September 2015
Short description: | p1@HULC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HULC_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 47bp_to_NR_004855, uc003myf.2_5end |
EntrezGene: | HULC |
HGNC: | 34232 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.06e-53 | 12 |
endodermal cell | 1.09e-21 | 58 |
intestinal epithelial cell | 5.37e-14 | 4 |
epithelial cell of large intestine | 8.04e-08 | 2 |