FFCP PHASE1:Hg19::chr5:76011569..76011609,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:76011569..76011609,+ to FFCP PHASE1:Hg19::chr5:76011569..76011609,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2149 | |EntrezGene=2149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3537 | |HGNC=3537 | ||
|TSSclassifier=strong | |||
|UniProt=P25116,Q2TNB2 | |UniProt=P25116,Q2TNB2 | ||
|association_with_transcript=-258bp_to_ENST00000319211,NM_001992,uc003ken.3_5end | |||
|cluster_id=chr5:76011569..76011609,+ | |||
|description=CAGE_peak_3_at_F2R_5end | |||
|id=chr5:76011569..76011609,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.32e-14!75;CL:0000055!7.58e-14!180;CL:0000222!3.39e-13!119;CL:0002139!1.22e-09!24;CL:0000115!6.43e-09!35;CL:0000220!6.51e-09!246;CL:0002371!1.41e-08!591;CL:0002321!1.62e-08!248;CL:0002334!2.58e-08!12;CL:0000183!4.35e-08!59;CL:0000680!6.87e-08!57;CL:0000056!6.87e-08!57;CL:0000355!6.87e-08!57;CL:0000187!1.02e-07!54;CL:0000192!2.02e-07!42;CL:0000514!2.02e-07!42;CL:0000071!4.06e-07!18;CL:0002546!4.06e-07!18;CL:0002078!5.21e-07!44;CL:0000144!7.94e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.32e-12;24!CL:0000115;2.75e-11;36!CL:0002334;3.05e-10;12!CL:0000071;3.64e-10;18!CL:0002078;1.49e-07;45!CL:0000134;1.79e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.28e-14,121;CL:0000115,1.04e-13,36;CL:0002139,3.87e-13,24;CL:0002078,5.25e-11,45;CL:0000071,1.71e-10,18;CL:0002546,1.71e-10,18;CL:0002334,3.23e-10,12;CL:0000057,1.38e-09,76;CL:0000213,1.70e-08,58;CL:0000215,1.70e-08,58;CL:0000192,5.88e-08,43;CL:0000514,5.88e-08,43 | |||
|ontology_enrichment_development_v019=CL:0002546;3.64e-10;18 | |||
|ontology_enrichment_disease=DOID:2394!4.13e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.13e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.19e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!5.06e-20!84;UBERON:0001009!2.30e-18!113;UBERON:0003914!4.33e-18!118;UBERON:0004535!9.55e-18!110;UBERON:0002049!1.58e-16!79;UBERON:0007798!1.58e-16!79;UBERON:0000055!2.59e-15!69;UBERON:0002100!2.85e-14!216;UBERON:0005256!5.83e-13!143;UBERON:0001981!7.95e-13!60;UBERON:0007500!7.95e-13!60;UBERON:0004537!7.95e-13!60;UBERON:0006965!7.95e-13!60;UBERON:0000477!8.36e-12!286;UBERON:0000490!5.41e-11!138;UBERON:0000914!1.44e-10!83;UBERON:0002329!1.44e-10!83;UBERON:0003077!1.44e-10!83;UBERON:0003059!1.44e-10!83;UBERON:0007282!1.44e-10!83;UBERON:0009618!1.44e-10!83;UBERON:0007285!1.44e-10!83;UBERON:0004111!1.87e-10!241;UBERON:0003103!4.65e-10!69;UBERON:0000475!5.03e-10!365;UBERON:0001637!5.50e-10!42;UBERON:0003509!5.50e-10!42;UBERON:0004572!5.50e-10!42;UBERON:0003104!1.35e-09!238;UBERON:0009142!1.35e-09!238;UBERON:0003102!2.81e-09!95;UBERON:0000926!8.46e-09!448;UBERON:0004120!8.46e-09!448;UBERON:0006603!8.46e-09!448;UBERON:0000483!8.65e-09!309;UBERON:0004290!1.16e-08!70;UBERON:0000119!1.18e-08!312;UBERON:0000486!1.38e-08!82;UBERON:0000468!1.68e-08!659;UBERON:0000481!3.07e-08!347;UBERON:0000480!4.43e-08!626;UBERON:0000467!7.30e-08!625;UBERON:0002385!7.98e-08!63;UBERON:0001015!7.98e-08!63;UBERON:0000383!7.98e-08!63;UBERON:0004573!8.19e-08!33;UBERON:0004571!8.19e-08!33;UBERON:0001134!1.27e-07!61;UBERON:0002036!1.27e-07!61;UBERON:0003082!1.27e-07!61;UBERON:0000947!2.29e-07!21;UBERON:0010191!2.29e-07!21;UBERON:0009569!3.01e-07!113;UBERON:0007100!3.33e-07!27;UBERON:0000165!3.90e-07!28;UBERON:0000930!3.90e-07!28;UBERON:0001986!4.06e-07!18;UBERON:0004638!4.06e-07!18;UBERON:0004852!4.06e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.64e-10;18!UBERON:0001986;3.64e-10;18!UBERON:0004852;3.64e-10;18!UBERON:0001637;9.50e-10;42!UBERON:0003509;9.50e-10;42!UBERON:0004572;9.50e-10;42!UBERON:0004573;2.22e-09;33!UBERON:0004571;2.22e-09;33!UBERON:0000947;2.70e-09;21!UBERON:0010191;2.70e-09;21!UBERON:0000487;8.65e-09;22!UBERON:0007500;1.92e-08;56!UBERON:0001981;1.92e-08;56!UBERON:0004537;1.92e-08;56!UBERON:0000055;2.51e-08;65!UBERON:0006914;3.97e-07;25!UBERON:0000948;9.07e-07;22 | |||
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| ||
|short_description=p3@F2R | |||
}} | }} |
Latest revision as of 18:39, 18 September 2015
Short description: | p3@F2R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_F2R_5end |
Coexpression cluster: | NA |
Association with transcript: | -258bp_to_ENST00000319211, NM_001992, uc003ken.3_5end |
EntrezGene: | F2R |
HGNC: | 3537 |
UniProt: | P25116Q2TNB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.28e-14 | 121 |
endothelial cell | 1.04e-13 | 36 |
endothelial cell of vascular tree | 3.87e-13 | 24 |
meso-epithelial cell | 5.25e-11 | 45 |
blood vessel endothelial cell | 1.71e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.71e-10 | 18 |
preadipocyte | 3.23e-10 | 12 |
fibroblast | 1.38e-09 | 76 |
lining cell | 1.70e-08 | 58 |
barrier cell | 1.70e-08 | 58 |
smooth muscle cell | 5.88e-08 | 43 |
smooth muscle myoblast | 5.88e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.19e-11 | 14 |