FFCP PHASE1:Hg19::chr5:36680616..36680631,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:36680616..36680631,+ to FFCP PHASE1:Hg19::chr5:36680616..36680631,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6507 | |EntrezGene=6507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10941 | |HGNC=10941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=167bp_to_ENST00000506178_5end | |||
|cluster_id=chr5:36680616..36680631,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_12_at_SLC1A3_5end | |||
|id=chr5:36680616..36680631,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.49e-09;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.95e-21;3!UBERON:0010122;4.70e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.16e-50!57;UBERON:0005068!3.16e-50!57;UBERON:0006241!3.16e-50!57;UBERON:0007135!3.16e-50!57;UBERON:0001017!2.39e-43!82;UBERON:0005743!1.13e-42!86;UBERON:0002616!5.68e-40!59;UBERON:0000073!3.00e-39!94;UBERON:0001016!3.00e-39!94;UBERON:0002780!1.91e-38!41;UBERON:0001890!1.91e-38!41;UBERON:0006240!1.91e-38!41;UBERON:0002020!3.26e-38!34;UBERON:0003528!3.26e-38!34;UBERON:0001893!7.29e-38!34;UBERON:0003080!2.45e-37!42;UBERON:0003075!9.85e-37!86;UBERON:0007284!9.85e-37!86;UBERON:0000955!2.91e-36!69;UBERON:0006238!2.91e-36!69;UBERON:0002791!3.37e-36!33;UBERON:0007023!3.44e-35!115;UBERON:0001869!1.22e-34!32;UBERON:0002346!1.50e-34!90;UBERON:0003056!1.22e-26!61;UBERON:0002619!1.56e-25!22;UBERON:0000956!9.38e-25!25;UBERON:0000203!9.38e-25!25;UBERON:0004121!1.37e-22!169;UBERON:0000924!9.62e-22!173;UBERON:0006601!9.62e-22!173;UBERON:0001950!1.33e-21!20;UBERON:0000033!2.32e-20!123;UBERON:0000153!6.97e-19!129;UBERON:0007811!6.97e-19!129;UBERON:0002308!2.51e-15!9;UBERON:0000125!2.51e-15!9;UBERON:0003076!1.39e-13!15;UBERON:0003057!1.39e-13!15;UBERON:0002420!2.86e-12!9;UBERON:0007245!2.86e-12!9;UBERON:0010009!2.86e-12!9;UBERON:0010011!2.86e-12!9;UBERON:0000454!2.86e-12!9;UBERON:0009663!9.14e-12!7;UBERON:0000062!2.12e-10!511;UBERON:0000369!5.47e-10!4;UBERON:0002435!5.47e-10!4;UBERON:0000204!5.47e-10!4;UBERON:0010082!5.47e-10!4;UBERON:0000200!6.09e-10!6;UBERON:0000025!8.27e-10!194;UBERON:0002298!2.04e-09!8;UBERON:0004733!1.71e-08!12;UBERON:0002028!1.71e-08!12;UBERON:0007277!1.71e-08!12;UBERON:0000064!1.72e-08!219;UBERON:0000467!1.79e-08!625;UBERON:0000480!2.00e-08!626;UBERON:0005383!2.47e-08!3;UBERON:0005382!2.47e-08!3;UBERON:0002771!3.19e-08!3;UBERON:0000468!4.92e-08!659;UBERON:0000349!6.14e-08!5;UBERON:0002240!8.01e-08!3;UBERON:0004732!9.55e-08!13;UBERON:0002021!1.37e-07!5;UBERON:0001871!1.84e-07!7;UBERON:0000477!1.93e-07!286;UBERON:0000922!2.00e-07!612;UBERON:0000923!3.10e-07!604;UBERON:0005291!3.10e-07!604;UBERON:0006598!3.10e-07!604;UBERON:0002532!3.10e-07!604;UBERON:0002050!3.44e-07!605;UBERON:0005423!3.44e-07!605;UBERON:0006331!4.45e-07!3;UBERON:0004111!5.42e-07!241;UBERON:0000988!5.87e-07!3;UBERON:0000483!7.12e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.04e-35;32!UBERON:0002791;2.14e-35;32!UBERON:0002619;3.85e-32;22!UBERON:0001893;2.05e-31;34!UBERON:0000956;2.11e-28;25!UBERON:0000203;2.11e-28;25!UBERON:0003528;1.28e-27;34!UBERON:0002020;1.28e-27;34!UBERON:0001950;5.23e-26;20!UBERON:0002780;2.26e-22;41!UBERON:0001890;2.26e-22;41!UBERON:0005383;2.95e-21;3!UBERON:0005382;2.95e-21;3!UBERON:0000073;1.35e-19;53!UBERON:0002616;1.35e-19;53!UBERON:0001874;2.25e-16;1!UBERON:0000369;3.32e-16;4!UBERON:0002435;3.32e-16;4!UBERON:0000204;3.32e-16;4!UBERON:0002420;6.33e-16;9!UBERON:0007245;6.33e-16;9!UBERON:0010009;6.33e-16;9!UBERON:0010011;6.33e-16;9!UBERON:0000454;6.33e-16;9!UBERON:0001017;7.25e-14;75!UBERON:0000349;2.52e-13;5!UBERON:0001872;3.65e-13;5!UBERON:0000955;1.10e-12;68!UBERON:0000200;2.36e-11;6!UBERON:0002037;3.95e-11;6!UBERON:0001016;3.46e-10;83!UBERON:0001871;7.31e-10;6!UBERON:0009663;1.13e-09;7!UBERON:0002771;3.43e-09;2!UBERON:0001876;4.70e-09;2!UBERON:0001873;4.70e-09;2!UBERON:0001954;4.70e-09;2!UBERON:0002702;4.70e-09;2!UBERON:0003022;4.70e-09;2!UBERON:0002421;4.70e-09;2!UBERON:0002600;4.70e-09;2!UBERON:0002680;1.02e-07;9!UBERON:0000125;1.02e-07;9!UBERON:0002308;1.02e-07;9!UBERON:0001895;1.02e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,1.08e-36,32;UBERON:0001869,1.08e-36,32;UBERON:0003528,1.45e-34,34;UBERON:0002020,1.45e-34,34;UBERON:0001893,1.45e-34,34;UBERON:0000073,3.43e-33,53;UBERON:0002616,3.43e-33,53;UBERON:0002619,4.43e-32,22;UBERON:0001049,2.11e-31,56;UBERON:0005068,2.11e-31,56;UBERON:0006241,2.11e-31,56;UBERON:0007135,2.11e-31,56;UBERON:0002780,1.06e-28,41;UBERON:0001890,1.06e-28,41;UBERON:0003080,1.06e-28,41;UBERON:0006240,1.06e-28,41;UBERON:0000956,2.39e-28,25;UBERON:0000203,2.39e-28,25;UBERON:0001950,5.47e-26,20;UBERON:0000955,2.06e-25,68;UBERON:0006238,2.06e-25,68;UBERON:0001017,2.16e-25,81;UBERON:0001016,8.16e-23,89;UBERON:0005383,1.76e-21,3;UBERON:0005382,1.76e-21,3;UBERON:0003075,2.73e-21,82;UBERON:0007284,2.73e-21,82;UBERON:0002346,2.87e-20,86;UBERON:0003056,3.16e-19,61;UBERON:0010371,1.25e-16,104;UBERON:0001874,1.65e-16,1;UBERON:0000369,2.26e-16,4;UBERON:0002435,2.26e-16,4;UBERON:0000204,2.26e-16,4;UBERON:0010082,2.26e-16,4;UBERON:0002420,4.43e-16,9;UBERON:0007245,4.43e-16,9;UBERON:0010009,4.43e-16,9;UBERON:0010011,4.43e-16,9;UBERON:0000454,4.43e-16,9;UBERON:0000349,2.52e-13,5;UBERON:0001872,3.43e-13,5;UBERON:0010314,6.47e-13,132;UBERON:0007023,1.61e-12,114;UBERON:0004121,1.46e-11,171;UBERON:0000924,1.46e-11,171;UBERON:0006601,1.46e-11,171;UBERON:0000200,2.76e-11,6;UBERON:0002037,3.95e-11,6;UBERON:0006215,3.95e-11,6;UBERON:0001871,6.69e-10,6;UBERON:0009663,9.11e-10,7;UBERON:0002771,3.43e-09,2;UBERON:0001873,3.71e-09,2;UBERON:0010122,3.71e-09,2;UBERON:0001876,4.02e-09,2;UBERON:0001954,5.49e-09,2;UBERON:0003022,5.49e-09,2;UBERON:0002421,5.49e-09,2;UBERON:0002600,5.49e-09,2;UBERON:0002702,5.94e-09,2;UBERON:0011216,1.39e-08,223;UBERON:0000025,1.48e-08,192;UBERON:0000125,8.60e-08,9;UBERON:0002308,8.60e-08,9;UBERON:0002680,1.02e-07,9;UBERON:0001895,1.02e-07,9;UBERON:0010092,1.02e-07,9 | |||
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|short_description=p12@SLC1A3 | |||
}} | }} |
Latest revision as of 19:35, 17 September 2015
Short description: | p12@SLC1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC1A3_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 167bp_to_ENST00000506178_5end |
EntrezGene: | SLC1A3 |
HGNC: | 10941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data