FFCP PHASE1:Hg19::chr5:173317180..173317191,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:173317180..173317191,+ to FFCP PHASE1:Hg19::chr5:173317180..173317191,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80315 | |EntrezGene=80315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21747 | |HGNC=21747 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-477bp_to_ENST00000518141_5end | |||
|cluster_id=chr5:173317180..173317191,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_14_at_CPEB4_5end | |||
|id=chr5:173317180..173317191,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.04e-17!76;CL:0000839!6.64e-17!70;CL:0000557!3.47e-15!71;CL:0000860!1.83e-14!45;CL:0002057!2.40e-14!42;CL:0002194!3.74e-13!63;CL:0000576!3.74e-13!63;CL:0000040!3.74e-13!63;CL:0000559!3.74e-13!63;CL:0002009!4.14e-13!65;CL:0000763!3.62e-10!112;CL:0000049!3.62e-10!112;CL:0000738!2.87e-09!140;CL:0002031!8.87e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.05e-25;39!CL:0000234;3.05e-25;39!CL:0000775;5.75e-24;3!CL:0000860;1.98e-23;33!CL:0002057;1.98e-23;33!CL:0000094;1.01e-15;8!CL:0000766;2.83e-13;69!CL:0000576;1.31e-12;48!CL:0000081;1.74e-11;11!CL:0000763;3.18e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.71e-27,72;CL:0000473,1.68e-24,48;CL:0000234,1.68e-24,48;CL:0000775,4.95e-24,3;CL:0000860,6.04e-20,42;CL:0002057,6.04e-20,42;CL:0002194,3.85e-19,59;CL:0000576,3.85e-19,59;CL:0000040,3.85e-19,59;CL:0000559,3.85e-19,59;CL:0002009,1.89e-18,61;CL:0000763,3.65e-17,108;CL:0000049,3.65e-17,108;CL:0000839,6.71e-17,66;CL:0000557,1.29e-16,67;CL:0000094,9.40e-16,8;CL:0000738,5.12e-13,136;CL:0000081,1.65e-11,11;CL:0002032,1.60e-10,161;CL:0000837,1.60e-10,161;CL:0000037,5.87e-10,168;CL:0000988,2.70e-09,177;CL:0002087,8.76e-09,115;CL:0002031,2.51e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;9.33e-16;42!UBERON:0005754;5.74e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.87e-15!115;UBERON:0002371!1.19e-11!80;UBERON:0002390!1.24e-11!102;UBERON:0003061!1.24e-11!102;UBERON:0001474!6.10e-11!86;UBERON:0001049!1.79e-10!57;UBERON:0005068!1.79e-10!57;UBERON:0006241!1.79e-10!57;UBERON:0007135!1.79e-10!57;UBERON:0002193!6.88e-10!112;UBERON:0002616!1.46e-09!59;UBERON:0003080!1.52e-09!42;UBERON:0002405!2.12e-09!115;UBERON:0004765!4.23e-09!101;UBERON:0001434!4.23e-09!101;UBERON:0002780!6.24e-09!41;UBERON:0001890!6.24e-09!41;UBERON:0006240!6.24e-09!41;UBERON:0000955!2.22e-08!69;UBERON:0006238!2.22e-08!69;UBERON:0002020!1.13e-07!34;UBERON:0003528!1.13e-07!34;UBERON:0001893!3.41e-07!34;UBERON:0002791!7.25e-07!33;UBERON:0001017!7.62e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;2.12e-09;1!UBERON:0000026;2.12e-09;1!UBERON:0008784;2.12e-09;1!UBERON:0006058;2.12e-09;1!UBERON:0003663;2.12e-09;1!UBERON:0004256;2.12e-09;1!UBERON:0004708;2.12e-09;1!UBERON:0002101;2.12e-09;1!UBERON:0004709;2.12e-09;1!UBERON:0002529;2.12e-09;1!UBERON:0010538;2.12e-09;1!UBERON:0003661;2.12e-09;1!UBERON:0010890;2.12e-09;1!UBERON:0002471;2.12e-09;1!UBERON:0001383;2.12e-09;1!UBERON:0010758;2.12e-09;1!UBERON:0010707;2.12e-09;1!UBERON:0000978;2.12e-09;1!UBERON:0002103;2.12e-09;1!UBERON:0001665;2.12e-09;1!UBERON:0003823;2.12e-09;1!UBERON:0000154;2.12e-09;1!UBERON:0010709;2.12e-09;1!UBERON:0000998;5.74e-09;1!UBERON:0006868;5.74e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.37e-14,98;UBERON:0003061,1.37e-14,98;UBERON:0002371,2.10e-14,76;UBERON:0001474,3.40e-13,82;UBERON:0002193,5.35e-13,108;UBERON:0004765,7.85e-12,90;UBERON:0002405,2.22e-11,93;UBERON:0001434,1.97e-10,100;UBERON:0005418,1.74e-09,1;UBERON:0001389,1.74e-09,1;UBERON:0000026,1.74e-09,1;UBERON:0008784,1.74e-09,1;UBERON:0006058,1.74e-09,1;UBERON:0003663,1.74e-09,1;UBERON:0004256,1.74e-09,1;UBERON:0004708,1.74e-09,1;UBERON:0002101,1.74e-09,1;UBERON:0004709,1.74e-09,1;UBERON:0002529,1.74e-09,1;UBERON:0010538,1.74e-09,1;UBERON:0003661,1.74e-09,1;UBERON:0010890,1.74e-09,1;UBERON:0002471,1.74e-09,1;UBERON:0001383,1.74e-09,1;UBERON:0004357,1.74e-09,1;UBERON:0004347,1.74e-09,1;UBERON:0005420,1.74e-09,1;UBERON:0005732,1.74e-09,1;UBERON:0010758,1.74e-09,1;UBERON:0010707,1.74e-09,1;UBERON:0000978,1.74e-09,1;UBERON:0002103,1.74e-09,1;UBERON:0001665,1.74e-09,1;UBERON:0003823,1.74e-09,1;UBERON:0000154,1.74e-09,1;UBERON:0010709,1.74e-09,1;UBERON:0005733,1.74e-09,1;UBERON:0005730,1.74e-09,1;UBERON:0000998,6.22e-09,1;UBERON:0006868,6.22e-09,1;UBERON:0003081,1.03e-07,203 | |||
|phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0.464448369948228,0,0,0,0.154934401160603,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,0.32389366601898,0,0.290796477559129,0.755751887377619,0.242584061187816,0.464858073811369,0.822335776043652,1.23882548358041,1.43846196161075,1.0246428261164,0.47296445977717,1.03423704220986,1.93645405075148,1.35426486594342,0.564727018627814,1.09162460023138,0.224723484445085,1.53041946185451,0.320929027076094,0.639337125799041,0,0.398927315243264,0,1.7412554317715,0,0,0.251248665256743,1.0429658368404,0.217188844705117,0.605399502633369,1.47311054395026,0.316462387440884,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.504867548488229,0,0,0.355009592516614,0,0,0,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0,0.290633938513962,0,0.492663237895943,0.088048434013226,0.829312462163088,0.720599767084807,0.37872730027914,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.299918973546171,2.43247561282381,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0,0.431255149719035,0,0.254094624222463,0,0,0,0,1.49801404789436,17.9496875522415,1.24324654030811,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0.355123450626254,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.412164046590889,0,0.082509499920588,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0,0.330569830721956,0.768760269460425,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,1.08006287447623,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.334330152832435,0.284136146806413,0.23874448473769,0,0.307160702099232,0.994147647766298,0.844016498463076,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0.295930216910801,2.3948309234694,0,0,0.556608588971108,0,0,0,0.724999575434793,0.1137934482855,0,0.236387681767936,0.344743373241465,0,0,0,0.482385754501632,0,0.442317039724898,0,0,0.10893846351899,0,0,0.113942055847001,0,0.269272933229316,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0,0,0.627865836814451,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0.219267951258557,0.164230914106418,0.0969890164884194,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0,0.514784993585894,0.288109595976299,0,0,0,0.104602846312333,0,0,0.600420288709789,0.410716136675979,0,0,0.262887354279314,0.837847203816763,0.687481272035051,0,0.199679000498991,1.71690419254628,0,0.201550417460179,0.360299883542404,0,0.0787831823072236,0,0.13480708770837,0.78741985211799,0,0,0.681017030557878,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.517131825446202,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0.365377795142688,0,0,0.2506898940227,0,0,0,1.77213635993397,2.56255156294123,0.500763722825999,0,0.443716206147409,0.124192805882767,0,0.124980407962107,0,0,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0.464033759878494,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0.1398795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| ||
|short_description=p14@CPEB4 | |||
}} | }} |
Latest revision as of 02:31, 17 September 2015
Short description: | p14@CPEB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CPEB4_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -477bp_to_ENST00000518141_5end |
EntrezGene: | CPEB4 |
HGNC: | 21747 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.71e-27 | 72 |
defensive cell | 1.68e-24 | 48 |
phagocyte | 1.68e-24 | 48 |
neutrophil | 4.95e-24 | 3 |
classical monocyte | 6.04e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.04e-20 | 42 |
monopoietic cell | 3.85e-19 | 59 |
monocyte | 3.85e-19 | 59 |
monoblast | 3.85e-19 | 59 |
promonocyte | 3.85e-19 | 59 |
macrophage dendritic cell progenitor | 1.89e-18 | 61 |
myeloid cell | 3.65e-17 | 108 |
common myeloid progenitor | 3.65e-17 | 108 |
myeloid lineage restricted progenitor cell | 6.71e-17 | 66 |
granulocyte monocyte progenitor cell | 1.29e-16 | 67 |
granulocyte | 9.40e-16 | 8 |
leukocyte | 5.12e-13 | 136 |
blood cell | 1.65e-11 | 11 |
hematopoietic oligopotent progenitor cell | 1.60e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-10 | 161 |
hematopoietic stem cell | 5.87e-10 | 168 |
hematopoietic cell | 2.70e-09 | 177 |
nongranular leukocyte | 8.76e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 2.51e-08 | 120 |