FFCP PHASE1:Hg19::chr5:152870450..152870476,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:152870450..152870476,+ to FFCP PHASE1:Hg19::chr5:152870450..152870476,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2890 | |EntrezGene=2890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4571 | |HGNC=4571 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=246bp_to_ENST00000474198_5end | |||
|cluster_id=chr5:152870450..152870476,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_7_at_GRIA1_5end | |||
|id=chr5:152870450..152870476,+ | |||
|ontology_enrichment_celltype=CL:0002605!2.37e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.15e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.32e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.65e-15;3!UBERON:0006601;5.78e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.51e-70!57;UBERON:0005068!3.51e-70!57;UBERON:0006241!3.51e-70!57;UBERON:0007135!3.51e-70!57;UBERON:0001017!6.85e-65!82;UBERON:0005743!1.76e-63!86;UBERON:0003075!4.91e-61!86;UBERON:0007284!4.91e-61!86;UBERON:0001869!8.87e-61!32;UBERON:0001893!1.94e-60!34;UBERON:0002020!3.78e-60!34;UBERON:0003528!3.78e-60!34;UBERON:0000073!4.33e-60!94;UBERON:0001016!4.33e-60!94;UBERON:0002616!1.49e-58!59;UBERON:0002791!1.79e-58!33;UBERON:0002780!3.01e-58!41;UBERON:0001890!3.01e-58!41;UBERON:0006240!3.01e-58!41;UBERON:0002346!1.36e-57!90;UBERON:0003080!1.30e-56!42;UBERON:0000955!1.27e-54!69;UBERON:0006238!1.27e-54!69;UBERON:0000956!9.79e-48!25;UBERON:0000203!9.79e-48!25;UBERON:0003056!7.10e-47!61;UBERON:0002619!6.43e-42!22;UBERON:0001950!7.09e-38!20;UBERON:0004121!1.23e-37!169;UBERON:0000033!1.29e-37!123;UBERON:0000924!2.42e-36!173;UBERON:0006601!2.42e-36!173;UBERON:0000153!4.00e-35!129;UBERON:0007811!4.00e-35!129;UBERON:0007023!1.64e-34!115;UBERON:0000475!8.71e-16!365;UBERON:0000025!1.23e-15!194;UBERON:0002420!2.14e-14!9;UBERON:0007245!2.14e-14!9;UBERON:0010009!2.14e-14!9;UBERON:0010011!2.14e-14!9;UBERON:0000454!2.14e-14!9;UBERON:0003076!2.28e-14!15;UBERON:0003057!2.28e-14!15;UBERON:0002308!1.02e-13!9;UBERON:0000125!1.02e-13!9;UBERON:0001871!3.96e-13!7;UBERON:0000200!5.90e-13!6;UBERON:0000483!6.99e-12!309;UBERON:0000349!1.12e-11!5;UBERON:0000119!1.31e-11!312;UBERON:0000064!3.20e-11!219;UBERON:0001872!3.48e-11!5;UBERON:0004111!3.54e-11!241;UBERON:0000477!3.87e-11!286;UBERON:0002021!5.04e-11!5;UBERON:0009663!1.82e-10!7;UBERON:0004733!4.77e-10!12;UBERON:0002028!4.77e-10!12;UBERON:0007277!4.77e-10!12;UBERON:0000481!2.89e-09!347;UBERON:0005174!3.47e-09!5;UBERON:0001137!3.47e-09!5;UBERON:0004732!3.78e-09!13;UBERON:0000369!3.92e-09!4;UBERON:0002435!3.92e-09!4;UBERON:0000204!3.92e-09!4;UBERON:0010082!3.92e-09!4;UBERON:0002680!4.52e-08!9;UBERON:0001895!4.52e-08!9;UBERON:0010092!4.52e-08!9;UBERON:0000467!6.50e-08!625;UBERON:0000480!7.29e-08!626;UBERON:0002771!2.63e-07!3;UBERON:0005383!3.52e-07!3;UBERON:0005382!3.52e-07!3;UBERON:0000062!4.53e-07!511;UBERON:0000468!8.82e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.33e-101;32!UBERON:0000956;2.36e-97;25!UBERON:0000203;2.36e-97;25!UBERON:0002791;5.46e-95;32!UBERON:0001893;7.16e-92;34!UBERON:0003528;3.18e-88;34!UBERON:0002020;3.18e-88;34!UBERON:0002619;2.17e-84;22!UBERON:0001950;1.08e-75;20!UBERON:0002780;7.88e-65;41!UBERON:0001890;7.88e-65;41!UBERON:0000073;7.81e-47;53!UBERON:0002616;7.81e-47;53!UBERON:0000955;9.15e-34;68!UBERON:0000200;8.25e-27;6!UBERON:0001017;6.05e-26;75!UBERON:0001016;4.17e-24;83!UBERON:0001871;7.46e-24;6!UBERON:0000349;2.64e-23;5!UBERON:0001872;4.82e-23;5!UBERON:0002420;7.84e-18;9!UBERON:0007245;7.84e-18;9!UBERON:0010009;7.84e-18;9!UBERON:0010011;7.84e-18;9!UBERON:0000454;7.84e-18;9!UBERON:0002021;3.07e-15;5!UBERON:0001870;2.15e-14;3!UBERON:0001876;1.13e-10;2!UBERON:0000369;1.20e-10;4!UBERON:0002435;1.20e-10;4!UBERON:0000204;1.20e-10;4!UBERON:0002771;1.86e-10;2!UBERON:0009663;2.05e-10;7!UBERON:0001954;2.71e-10;2!UBERON:0003022;2.71e-10;2!UBERON:0002421;2.71e-10;2!UBERON:0002600;2.71e-10;2!UBERON:0002702;6.37e-10;2!UBERON:0007023;2.71e-09;114!UBERON:0011216;9.34e-09;132!UBERON:0000125;4.03e-08;9!UBERON:0002308;4.03e-08;9!UBERON:0002037;8.48e-08;6!UBERON:0005383;6.91e-07;3!UBERON:0005382;6.91e-07;3!UBERON:0010314;7.01e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.36e-111,32;UBERON:0001893,7.67e-105,34;UBERON:0002791,7.93e-104,32;UBERON:0003528,1.58e-97,34;UBERON:0002020,1.58e-97,34;UBERON:0000956,3.56e-97,25;UBERON:0000203,3.56e-97,25;UBERON:0002780,1.65e-92,41;UBERON:0001890,1.65e-92,41;UBERON:0003080,1.65e-92,41;UBERON:0006240,1.65e-92,41;UBERON:0000073,1.12e-86,53;UBERON:0002616,1.12e-86,53;UBERON:0002619,3.05e-84,22;UBERON:0001049,9.71e-82,56;UBERON:0005068,9.71e-82,56;UBERON:0006241,9.71e-82,56;UBERON:0007135,9.71e-82,56;UBERON:0001950,2.77e-75,20;UBERON:0000955,2.35e-69,68;UBERON:0006238,2.35e-69,68;UBERON:0001017,7.94e-69,81;UBERON:0003056,1.04e-64,61;UBERON:0001016,2.39e-61,89;UBERON:0003075,2.35e-57,82;UBERON:0007284,2.35e-57,82;UBERON:0002346,2.22e-54,86;UBERON:0010371,8.51e-44,104;UBERON:0010314,2.21e-35,132;UBERON:0004121,1.20e-30,171;UBERON:0000924,1.20e-30,171;UBERON:0006601,1.20e-30,171;UBERON:0007023,1.40e-27,114;UBERON:0000200,9.36e-27,6;UBERON:0000349,6.43e-24,5;UBERON:0001871,9.20e-24,6;UBERON:0011216,2.48e-23,223;UBERON:0001872,7.88e-23,5;UBERON:0000025,1.84e-20,192;UBERON:0002420,2.22e-18,9;UBERON:0007245,2.22e-18,9;UBERON:0010009,2.22e-18,9;UBERON:0010011,2.22e-18,9;UBERON:0000454,2.22e-18,9;UBERON:0002021,3.45e-15,5;UBERON:0004111,6.58e-15,240;UBERON:0001870,2.32e-14,3;UBERON:0000369,5.16e-11,4;UBERON:0002435,5.16e-11,4;UBERON:0000204,5.16e-11,4;UBERON:0010082,5.16e-11,4;UBERON:0000483,5.49e-11,306;UBERON:0009663,8.01e-11,7;UBERON:0000119,8.29e-11,309;UBERON:0001876,8.97e-11,2;UBERON:0001954,1.38e-10,2;UBERON:0003022,1.38e-10,2;UBERON:0002421,1.38e-10,2;UBERON:0002600,1.38e-10,2;UBERON:0002771,2.66e-10,2;UBERON:0002702,5.84e-10,2;UBERON:0000125,1.97e-08,9;UBERON:0002308,1.97e-08,9;UBERON:0002037,7.67e-08,6;UBERON:0006215,7.67e-08,6;UBERON:0005383,4.53e-07,3;UBERON:0005382,4.53e-07,3 | |||
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| ||
|short_description=p7@GRIA1 | |||
}} | }} |
Latest revision as of 11:30, 16 September 2015
Short description: | p7@GRIA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GRIA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 246bp_to_ENST00000474198_5end |
EntrezGene: | GRIA1 |
HGNC: | 4571 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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astrocyte of the cerebral cortex | 2.32e-14 | 3 |