FFCP PHASE1:Hg19::chr5:140346310..140346350,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:140346310..140346350,+ to FFCP PHASE1:Hg19::chr5:140346310..140346350,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56134 | |EntrezGene=56134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8677 | |HGNC=8677 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5I4 | |UniProt=Q9Y5I4 | ||
|association_with_transcript=-1bp_to_NM_031883,uc011dag.1_5end | |||
|cluster_id=chr5:140346310..140346350,+ | |||
|description=CAGE_peak_3_at_PCDHAC2_5end | |||
|id=chr5:140346310..140346350,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.04e-09;3!CL:0000149;2.22e-07;4!CL:0000047;5.10e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.57e-09,3;CL:0000149,3.00e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.31e-11;82!UBERON:0006215;4.32e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;6.76e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.24e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.46e-43!94;UBERON:0001016!5.46e-43!94;UBERON:0005743!2.85e-38!86;UBERON:0001017!1.23e-34!82;UBERON:0007023!6.20e-32!115;UBERON:0002346!5.15e-30!90;UBERON:0001049!1.07e-29!57;UBERON:0005068!1.07e-29!57;UBERON:0006241!1.07e-29!57;UBERON:0007135!1.07e-29!57;UBERON:0003075!9.47e-29!86;UBERON:0007284!9.47e-29!86;UBERON:0000955!2.46e-28!69;UBERON:0006238!2.46e-28!69;UBERON:0000924!1.10e-25!173;UBERON:0006601!1.10e-25!173;UBERON:0002616!2.77e-25!59;UBERON:0004121!1.91e-24!169;UBERON:0003056!3.22e-22!61;UBERON:0000033!1.32e-21!123;UBERON:0002780!4.21e-21!41;UBERON:0001890!4.21e-21!41;UBERON:0006240!4.21e-21!41;UBERON:0003080!2.51e-20!42;UBERON:0000153!1.37e-19!129;UBERON:0007811!1.37e-19!129;UBERON:0001893!2.68e-16!34;UBERON:0002020!3.84e-16!34;UBERON:0003528!3.84e-16!34;UBERON:0002791!1.92e-15!33;UBERON:0001869!1.24e-14!32;UBERON:0001950!1.20e-13!20;UBERON:0002619!1.92e-13!22;UBERON:0000064!1.29e-12!219;UBERON:0000956!2.98e-12!25;UBERON:0000203!2.98e-12!25;UBERON:0000063!4.45e-12!97;UBERON:0003076!1.31e-10!15;UBERON:0003057!1.31e-10!15;UBERON:0004732!1.41e-09!13;UBERON:0000922!2.11e-09!612;UBERON:0000062!3.83e-09!511;UBERON:0004733!1.23e-08!12;UBERON:0002028!1.23e-08!12;UBERON:0007277!1.23e-08!12;UBERON:0000481!1.29e-08!347;UBERON:0001048!2.79e-08!168;UBERON:0000923!3.63e-08!604;UBERON:0005291!3.63e-08!604;UBERON:0006598!3.63e-08!604;UBERON:0002532!3.63e-08!604;UBERON:0002050!4.40e-08!605;UBERON:0005423!4.40e-08!605;UBERON:0000468!7.53e-08!659;UBERON:0008947!8.07e-08!38;UBERON:0003258!8.07e-08!38;UBERON:0000200!1.60e-07!6;UBERON:0000475!2.30e-07!365;UBERON:0000025!6.32e-07!194;UBERON:0000467!6.64e-07!625;UBERON:0000480!7.93e-07!626;UBERON:0002298!8.29e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.36e-20;53!UBERON:0002616;5.36e-20;53!UBERON:0001950;1.54e-18;20!UBERON:0002780;3.22e-17;41!UBERON:0001890;3.22e-17;41!UBERON:0002619;1.09e-16;22!UBERON:0001893;2.10e-15;34!UBERON:0000956;1.90e-14;25!UBERON:0000203;1.90e-14;25!UBERON:0004732;1.93e-14;13!UBERON:0001016;3.65e-14;83!UBERON:0001869;5.60e-14;32!UBERON:0000955;2.41e-13;68!UBERON:0001017;7.59e-13;75!UBERON:0000200;7.95e-13;6!UBERON:0003528;3.30e-12;34!UBERON:0002020;3.30e-12;34!UBERON:0004733;3.30e-12;12!UBERON:0002028;3.30e-12;12!UBERON:0002791;8.74e-12;32!UBERON:0001894;1.28e-11;7!UBERON:0001870;1.04e-09;3!UBERON:0001781;1.04e-09;3!UBERON:0001782;1.04e-09;3!UBERON:0002680;6.18e-09;9!UBERON:0001895;6.18e-09;9!UBERON:0007023;1.61e-08;114!UBERON:0000010;1.66e-08;8!UBERON:0002298;2.87e-08;6!UBERON:0003296;4.29e-08;4!UBERON:0010133;4.29e-08;4!UBERON:0000007;1.93e-07;2!UBERON:0003714;5.10e-07;2!UBERON:0002702;5.10e-07;2!UBERON:0005162;5.10e-07;2!UBERON:0000122;5.10e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.51e-36,53;UBERON:0002616,4.51e-36,53;UBERON:0001016,2.61e-35,89;UBERON:0001049,8.83e-34,56;UBERON:0005068,8.83e-34,56;UBERON:0006241,8.83e-34,56;UBERON:0007135,8.83e-34,56;UBERON:0000955,6.75e-31,68;UBERON:0006238,6.75e-31,68;UBERON:0001017,1.11e-28,81;UBERON:0003075,1.68e-28,82;UBERON:0007284,1.68e-28,82;UBERON:0002346,8.31e-27,86;UBERON:0002780,3.10e-25,41;UBERON:0001890,3.10e-25,41;UBERON:0003080,3.10e-25,41;UBERON:0006240,3.10e-25,41;UBERON:0003056,5.95e-23,61;UBERON:0007023,1.35e-21,114;UBERON:0010371,8.46e-21,104;UBERON:0011216,2.83e-20,223;UBERON:0001950,2.57e-19,20;UBERON:0010314,1.63e-18,132;UBERON:0004121,1.40e-17,171;UBERON:0000924,1.40e-17,171;UBERON:0006601,1.40e-17,171;UBERON:0002619,2.17e-17,22;UBERON:0001893,9.61e-17,34;UBERON:0001869,1.54e-15,32;UBERON:0000956,4.64e-15,25;UBERON:0000203,4.64e-15,25;UBERON:0003528,1.66e-14,34;UBERON:0002020,1.66e-14,34;UBERON:0004732,1.82e-14,13;UBERON:0002791,2.21e-13,32;UBERON:0000200,1.16e-12,6;UBERON:0004733,2.95e-12,12;UBERON:0002028,2.95e-12,12;UBERON:0007277,2.95e-12,12;UBERON:0001781,3.68e-12,4;UBERON:0001894,1.46e-11,7;UBERON:0006222,1.46e-11,7;UBERON:0000025,3.80e-10,192;UBERON:0001870,5.39e-10,3;UBERON:0003076,1.38e-09,15;UBERON:0003057,1.38e-09,15;UBERON:0001782,1.57e-09,3;UBERON:0005424,1.57e-09,3;UBERON:0002680,4.82e-09,9;UBERON:0001895,4.82e-09,9;UBERON:0010092,4.82e-09,9;UBERON:0000010,2.56e-08,8;UBERON:0003296,2.57e-08,4;UBERON:0010133,2.57e-08,4;UBERON:0002298,2.69e-08,6;UBERON:0000966,3.98e-08,6;UBERON:0005388,3.98e-08,6;UBERON:0001802,3.98e-08,6;UBERON:0004111,8.83e-08,240;UBERON:0000007,9.59e-08,2;UBERON:0005162,4.42e-07,2;UBERON:0000122,4.42e-07,2;UBERON:0002702,5.32e-07,2;UBERON:0000483,5.35e-07,306;UBERON:0000119,7.65e-07,309 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,0.589405839739707,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.674338760312407,0.241011029883482,0,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0.626909658919938,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640695746278505,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,1.19705285616665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28225062558195,1.31205858279882,1.62689197332152,0.206082023295445,0,0,0,0,0,0.386682873168488,0,0,0,0,0,0,0.0890320356467374,0.826424576804891,0.384380134730212,0,0.910420027699949,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50177493086331,1.34060455107157,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,1.78309414843965,0,0,0,0,0,0.562677665642051,1.66963057534359,0,0.422250816255987,0,0.552567831062295,0,0.102268682502155,0,0,0,1.25314822272926,0,0,0,0,0.969332746095218,2.04089815956073,0,0.260427761085233,0,0,1.4793148277115,0,0,0,0,1.21537496453305,0,0.361789315876224,3.05163472634166,2.43274371848694,2.36438095162838,0.438770794307945,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0.995261931078505,0.176915129006678,0,0,0,0,1.68502832451693,0,2.10838001152805,0,0.391329237864179,0,0,0,0.61214552326098,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,1.89932387867636,0,0.160317640503067,1.49417096317547,0.19980960958213,3.60226042885265,0,0,0.576219191952599,0.372757606696298,0,0.135904206073614,0.104602846312333,0,0,0,0.684526894459965,0,0.429765441419957,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,1.08270229666224,0,0,0.544813624446302,0.482259445395058,0.687697182986169,0,0,0,1.94398581305679,0,0.236417121897595,0,0.105600336519406,0.179287339332845,0.191915197319445,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.646414781807753,1.45455861916959,2.22412889249628,0,1.28144895081234,0.157204305099666,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0.157054096250234,1.77213635993397,1.46431517882356,1.251909307065,1.72022758707021,0.887432412294818,1.1177352529449,2.21357815897969,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0,0.429642228169954,0,0.398095888698616,0,0,0,0,0,0,0.782982875895635,0,0,0,0,2.16161013012681,1.75427239662966,0,0.192914038270915,0,0,0,0,0.829550616910385,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,2.09819261579167,1.86623178009892,0.255788742607303,7.43991198637104,0,1.52893493468819,0.169732529954025,0,0.247871528518004,1.11728983594649,0,0.0788617450012534,0,0.352675943690684,0,1.79841830270087,1.41696576325585,0.957803154342908,1.8460472781668,0,1.86724581653388,1.29180516505481,1.42769420259154,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,1.2832141077495,1.56215619722769,0.826747186004736,1.8390584956233,0,0,0,0.879356221798103,0,0.535701835878287,4.03540466662589,1.82089681270989,2.50428410486427,0.266107110487916,0,0,1.76721305739762,2.17050152757402,0,1.11231401892069,0.078493092850514,0.628462359664008,0,1.82631744101899,0,0,0.857718530119876,0.316027223465453,0,0,0,0,0,0,0,1.30165200803622,0.340853619036631,0.423387050190929,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0.713520544665411,0,0,0.150962843566674,0,0.218559560503957,0,0,2.59244201811789,0.196308467114945,0.891139200981258,0.4226557275834,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0.458729283404541,0.716697915757256,0,2.37970215668201,0.872701380680755,0,0,0,0,0,0,0.126698501011437,0.61193297845189,1.06886962106224,1.74600309116205,0,0.682008283964155,1.33982065078089,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| ||
|short_description=p3@PCDHAC2 | |||
}} | }} |
Latest revision as of 03:11, 25 September 2015
Short description: | p3@PCDHAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCDHAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_NM_031883, uc011dag.1_5end |
EntrezGene: | PCDHAC2 |
HGNC: | 8677 |
UniProt: | Q9Y5I4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.57e-09 | 3 |
visual pigment cell | 3.00e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.24e-09 | 6 |