FFCP PHASE1:Hg19::chr5:138940742..138940769,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:138940742..138940769,+ to FFCP PHASE1:Hg19::chr5:138940742..138940769,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7322 | |EntrezGene=7322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12475 | |HGNC=12475 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RP6,P62837,D6RFM0 | |UniProt=Q96RP6,P62837,D6RFM0 | ||
|association_with_transcript=0bp_to_ENST00000253815,ENST00000398733,ENST00000505007,NM_003339,NM_181838,uc003leq.2,uc003ler.2_5end | |||
|cluster_id=chr5:138940742..138940769,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_9_at_UBE2D2_5end | |||
|id=chr5:138940742..138940769,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.03e-10;5!CL:0000540;2.83e-09;6!CL:0000404;2.83e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.10e-10,5;CL:0000047,6.84e-10,8;CL:0000540,1.98e-09,6;CL:0000031,1.98e-09,6;CL:0000404,1.98e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.83e-09;6!UBERON:0006241;5.23e-07;3!UBERON:0003057;5.23e-07;3!UBERON:0006601;6.38e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.85e-24!115;UBERON:0001049!1.33e-23!57;UBERON:0005068!1.33e-23!57;UBERON:0006241!1.33e-23!57;UBERON:0007135!1.33e-23!57;UBERON:0005743!2.98e-23!86;UBERON:0000073!5.32e-23!94;UBERON:0001016!5.32e-23!94;UBERON:0001017!6.08e-23!82;UBERON:0003075!8.44e-19!86;UBERON:0007284!8.44e-19!86;UBERON:0002616!1.05e-18!59;UBERON:0003080!2.44e-18!42;UBERON:0002780!4.96e-18!41;UBERON:0001890!4.96e-18!41;UBERON:0006240!4.96e-18!41;UBERON:0002346!1.19e-17!90;UBERON:0000955!1.43e-17!69;UBERON:0006238!1.43e-17!69;UBERON:0003056!6.55e-15!61;UBERON:0001893!9.30e-15!34;UBERON:0002020!1.23e-14!34;UBERON:0003528!1.23e-14!34;UBERON:0002791!3.70e-14!33;UBERON:0004121!5.53e-14!169;UBERON:0001869!1.29e-13!32;UBERON:0000924!1.87e-13!173;UBERON:0006601!1.87e-13!173;UBERON:0000033!1.36e-12!123;UBERON:0000153!1.80e-12!129;UBERON:0007811!1.80e-12!129;UBERON:0000956!7.84e-10!25;UBERON:0000203!7.84e-10!25;UBERON:0004111!3.88e-09!241;UBERON:0002619!5.26e-09!22;UBERON:0000025!8.85e-09!194;UBERON:0001950!6.95e-08!20;UBERON:0000477!2.24e-07!286;UBERON:0000119!2.51e-07!312;UBERON:0000483!5.89e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.34e-22;41!UBERON:0001890;1.34e-22;41!UBERON:0000073;3.79e-22;53!UBERON:0002616;3.79e-22;53!UBERON:0001893;1.03e-20;34!UBERON:0003528;1.35e-20;34!UBERON:0002020;1.35e-20;34!UBERON:0002791;4.04e-20;32!UBERON:0001869;1.16e-19;32!UBERON:0002619;7.37e-17;22!UBERON:0000956;1.87e-14;25!UBERON:0000203;1.87e-14;25!UBERON:0000955;6.70e-14;68!UBERON:0001950;8.76e-14;20!UBERON:0002420;9.39e-14;9!UBERON:0000125;9.39e-14;9!UBERON:0007245;9.39e-14;9!UBERON:0002308;9.39e-14;9!UBERON:0010009;9.39e-14;9!UBERON:0010011;9.39e-14;9!UBERON:0000454;9.39e-14;9!UBERON:0001016;1.97e-13;83!UBERON:0001017;5.36e-13;75!UBERON:0000349;1.02e-10;5!UBERON:0009663;1.75e-10;7!UBERON:0004732;1.96e-09;13!UBERON:0007023;5.91e-09;114!UBERON:0002298;1.26e-08;6!UBERON:0004733;9.47e-08;12!UBERON:0002028;9.47e-08;12!UBERON:0002021;3.12e-07;5!UBERON:0002240;5.23e-07;3!UBERON:0005174;5.23e-07;3!UBERON:0001137;5.23e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.63e-43,81;UBERON:0001049,2.30e-41,56;UBERON:0005068,2.30e-41,56;UBERON:0006241,2.30e-41,56;UBERON:0007135,2.30e-41,56;UBERON:0001016,1.14e-39,89;UBERON:0000073,1.32e-36,53;UBERON:0002616,1.32e-36,53;UBERON:0003075,8.84e-34,82;UBERON:0007284,8.84e-34,82;UBERON:0000955,4.90e-32,68;UBERON:0006238,4.90e-32,68;UBERON:0002346,1.19e-31,86;UBERON:0002780,7.10e-30,41;UBERON:0001890,7.10e-30,41;UBERON:0003080,7.10e-30,41;UBERON:0006240,7.10e-30,41;UBERON:0001893,8.00e-26,34;UBERON:0010371,1.39e-25,104;UBERON:0003528,1.57e-25,34;UBERON:0002020,1.57e-25,34;UBERON:0007023,1.02e-24,114;UBERON:0003056,2.16e-24,61;UBERON:0001869,1.17e-22,32;UBERON:0002791,2.09e-22,32;UBERON:0004121,2.14e-20,171;UBERON:0000924,2.14e-20,171;UBERON:0006601,2.14e-20,171;UBERON:0010314,6.53e-19,132;UBERON:0002619,8.62e-17,22;UBERON:0000956,2.13e-14,25;UBERON:0000203,2.13e-14,25;UBERON:0000125,4.78e-14,9;UBERON:0002308,4.78e-14,9;UBERON:0002420,5.33e-14,9;UBERON:0007245,5.33e-14,9;UBERON:0010009,5.33e-14,9;UBERON:0010011,5.33e-14,9;UBERON:0000454,5.33e-14,9;UBERON:0001950,1.15e-13,20;UBERON:0003076,2.25e-12,15;UBERON:0003057,2.25e-12,15;UBERON:0011216,1.04e-11,223;UBERON:0000349,4.86e-11,5;UBERON:0009663,1.72e-10,7;UBERON:0004732,1.30e-09,13;UBERON:0002298,4.42e-09,6;UBERON:0000025,4.63e-08,192;UBERON:0004733,6.43e-08,12;UBERON:0002028,6.43e-08,12;UBERON:0007277,6.43e-08,12;UBERON:0000988,4.19e-07,3;UBERON:0002021,5.47e-07,5;UBERON:0002240,5.86e-07,3;UBERON:0005174,5.86e-07,3;UBERON:0001137,5.86e-07,3 | |||
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| ||
|short_description=p9@UBE2D2 | |||
}} | }} |
Latest revision as of 00:37, 25 September 2015
Short description: | p9@UBE2D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_UBE2D2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000253815, ENST00000398733, ENST00000505007, NM_003339, NM_181838, uc003leq.2, uc003ler.2_5end |
EntrezGene: | UBE2D2 |
HGNC: | 12475 |
UniProt: | Q96RP6P62837D6RFM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.10e-10 | 5 |
neuronal stem cell | 6.84e-10 | 8 |
neuron | 1.98e-09 | 6 |
neuroblast | 1.98e-09 | 6 |
electrically signaling cell | 1.98e-09 | 6 |