FFCP PHASE1:Hg19::chr4:40859132..40859184,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:40859132..40859184,- to FFCP PHASE1:Hg19::chr4:40859132..40859184,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=323 | |EntrezGene=323 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=582 | |HGNC=582 | ||
|TSSclassifier=strong | |||
|UniProt=B4DSL4 | |UniProt=B4DSL4 | ||
|association_with_transcript=0bp_to_ENST00000502841,ENST00000504305,ENST00000543538,NM_001166051,NM_001166052,uc003gvk.2_5end | |||
|cluster_id=chr4:40859132..40859184,- | |||
|description=CAGE_peak_4_at_APBB2_5end | |||
|id=chr4:40859132..40859184,- | |||
|ontology_enrichment_celltype=CL:0000236!1.00e-09!14;CL:0000047!4.02e-08!8;CL:0002057!9.14e-08!42;CL:0002319!4.21e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.82e-14;13!CL:0000540;8.17e-09;6!CL:0000404;8.17e-09;6!CL:0002319;1.48e-08;25!CL:0000945;7.12e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.11e-12,14;CL:0000047,1.42e-11,8;CL:0000540,8.31e-09,6;CL:0000031,8.31e-09,6;CL:0000404,8.31e-09,6;CL:0002319,1.47e-08,25;CL:0000945,5.05e-08,24;CL:0000826,5.05e-08,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.92e-10;82!CL:0000031;8.17e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.14e-37!86;UBERON:0001017!3.33e-37!82;UBERON:0000073!4.50e-37!94;UBERON:0001016!4.50e-37!94;UBERON:0001049!4.38e-34!57;UBERON:0005068!4.38e-34!57;UBERON:0006241!4.38e-34!57;UBERON:0007135!4.38e-34!57;UBERON:0002346!1.13e-29!90;UBERON:0003075!2.00e-28!86;UBERON:0007284!2.00e-28!86;UBERON:0000955!2.30e-27!69;UBERON:0006238!2.30e-27!69;UBERON:0002616!5.33e-27!59;UBERON:0002780!7.28e-27!41;UBERON:0001890!7.28e-27!41;UBERON:0006240!7.28e-27!41;UBERON:0003080!8.59e-26!42;UBERON:0007023!9.72e-26!115;UBERON:0002020!3.05e-25!34;UBERON:0003528!3.05e-25!34;UBERON:0001893!4.29e-25!34;UBERON:0002791!2.43e-24!33;UBERON:0001869!1.03e-23!32;UBERON:0003056!1.44e-21!61;UBERON:0000924!8.72e-19!173;UBERON:0006601!8.72e-19!173;UBERON:0000956!3.32e-18!25;UBERON:0000203!3.32e-18!25;UBERON:0004121!1.07e-17!169;UBERON:0002619!9.34e-16!22;UBERON:0000153!2.10e-15!129;UBERON:0007811!2.10e-15!129;UBERON:0000033!6.22e-15!123;UBERON:0001950!3.12e-14!20;UBERON:0003076!2.50e-09!15;UBERON:0003057!2.50e-09!15;UBERON:0002308!1.64e-08!9;UBERON:0000125!1.64e-08!9;UBERON:0002420!1.73e-08!9;UBERON:0007245!1.73e-08!9;UBERON:0010009!1.73e-08!9;UBERON:0010011!1.73e-08!9;UBERON:0000454!1.73e-08!9;UBERON:0004732!7.14e-08!13;UBERON:0004733!4.66e-07!12;UBERON:0002028!4.66e-07!12;UBERON:0007277!4.66e-07!12;UBERON:0009663!6.65e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.53e-33;34!UBERON:0002020;6.53e-33;34!UBERON:0001893;8.74e-33;34!UBERON:0001869;1.80e-32;32!UBERON:0002791;2.07e-32;32!UBERON:0002780;1.15e-27;41!UBERON:0001890;1.15e-27;41!UBERON:0000956;2.13e-27;25!UBERON:0000203;2.13e-27;25!UBERON:0000073;4.02e-26;53!UBERON:0002616;4.02e-26;53!UBERON:0002619;1.25e-23;22!UBERON:0001950;2.74e-21;20!UBERON:0000955;5.48e-19;68!UBERON:0001017;2.91e-18;75!UBERON:0001016;1.07e-17;83!UBERON:0000125;3.05e-12;9!UBERON:0002308;3.05e-12;9!UBERON:0002420;3.55e-12;9!UBERON:0007245;3.55e-12;9!UBERON:0010009;3.55e-12;9!UBERON:0010011;3.55e-12;9!UBERON:0000454;3.55e-12;9!UBERON:0009663;8.81e-10;7!UBERON:0004732;4.27e-09;13!UBERON:0002298;9.15e-09;6!UBERON:0004733;6.24e-08;12!UBERON:0002028;6.24e-08;12!UBERON:0000349;1.14e-07;5!UBERON:0000200;1.19e-07;6!UBERON:0007023;1.92e-07;114!UBERON:0001872;5.62e-07;5!UBERON:0001871;5.75e-07;6!UBERON:0000922;6.83e-07;49!UBERON:0000369;8.14e-07;4!UBERON:0002435;8.14e-07;4!UBERON:0000204;8.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.14e-52,81;UBERON:0001016,3.02e-50,89;UBERON:0001049,2.64e-48,56;UBERON:0005068,2.64e-48,56;UBERON:0006241,2.64e-48,56;UBERON:0007135,2.64e-48,56;UBERON:0000073,1.41e-44,53;UBERON:0002616,1.41e-44,53;UBERON:0000955,6.50e-39,68;UBERON:0006238,6.50e-39,68;UBERON:0002346,3.49e-38,86;UBERON:0003528,3.72e-38,34;UBERON:0002020,3.72e-38,34;UBERON:0002780,4.97e-38,41;UBERON:0001890,4.97e-38,41;UBERON:0003080,4.97e-38,41;UBERON:0006240,4.97e-38,41;UBERON:0001893,6.29e-38,34;UBERON:0003075,4.80e-36,82;UBERON:0007284,4.80e-36,82;UBERON:0001869,8.25e-36,32;UBERON:0002791,1.23e-35,32;UBERON:0003056,1.45e-28,61;UBERON:0000956,2.32e-27,25;UBERON:0000203,2.32e-27,25;UBERON:0010371,3.42e-27,104;UBERON:0004121,2.28e-24,171;UBERON:0000924,2.28e-24,171;UBERON:0006601,2.28e-24,171;UBERON:0002619,1.32e-23,22;UBERON:0007023,1.52e-21,114;UBERON:0001950,2.85e-21,20;UBERON:0010314,1.12e-18,132;UBERON:0011216,3.31e-16,223;UBERON:0000125,3.64e-12,9;UBERON:0002308,3.64e-12,9;UBERON:0002420,3.94e-12,9;UBERON:0007245,3.94e-12,9;UBERON:0010009,3.94e-12,9;UBERON:0010011,3.94e-12,9;UBERON:0000454,3.94e-12,9;UBERON:0003076,3.14e-11,15;UBERON:0003057,3.14e-11,15;UBERON:0000025,6.01e-11,192;UBERON:0009663,1.01e-09,7;UBERON:0004732,4.25e-09,13;UBERON:0002298,9.62e-09,6;UBERON:0004733,6.26e-08,12;UBERON:0002028,6.26e-08,12;UBERON:0007277,6.26e-08,12;UBERON:0000349,1.11e-07,5;UBERON:0000200,1.22e-07,6;UBERON:0001872,5.64e-07,5;UBERON:0001871,5.71e-07,6;UBERON:0000369,8.05e-07,4;UBERON:0002435,8.05e-07,4;UBERON:0000204,8.05e-07,4;UBERON:0010082,8.05e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.61560529038394,0.204000691244253,0,36.3519703656442,12.3186982565596,16.1950005077296,0,0.246301768349837,0,0,0.767658796194425,1.39334510984468,0,0,0,1.93668001450754,0,0.293600439334847,1.66198622559563,1.60435557976113,1.73608696572681,0,0,0,0.290796477559129,0.755751887377619,0,0.697287110717054,0.411167888021826,0.929119112685311,1.43846196161075,2.0492856522328,0.945928919554341,1.72372840368309,2.5819387343353,0,0.188242339542605,0.818718450173537,0.674170453335254,0.612167784741805,1.60464513538047,0.639337125799041,0.989553900560148,0.997318288108159,0.852449501065388,0.870627715885752,0,1.24564449799115,2.00998932205395,2.60741459210101,3.47502151528187,0.605399502633369,1.47311054395026,0.632924774881769,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,1.75996244461323,2.18455444504853,2.66852776159066,5.54749289336459,4.00395987036012,2.87376219977242,1.98313461835459,6.67837628174755,14.2303242277362,13.5064553555316,14.9086558968839,0,2.24203425192614,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.221729397462564,0.351339142772504,3.92937226493138,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0.22452937262617,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0.491337269247072,0,0,0,0,0,0.336672227908132,0.375355559615893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,8.66013313520127,14.8433340520063,7.66880022938821,6.21966330092223,9.84051318414951,17.8838905947157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,2.08674728955138,0,0,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.336393253036082,0.87192013766656,0.7333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,49.2943570991579,33.8363620029816,10.8260433788877,15.2439801454257,10.2070200264506,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,1.30926073077505,2.35304930753057,1.46139224653261,1.26661954671451,0,0.170093705276516,0.647747748306418,0,0.541892875087706,0,0.509752546090077,0,1.79099803777743,0,0,2.3080511260475,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,0.569647187174163,0.238231775457789,1.23408681925858,0.648473311192717,0.540031437238115,0,0.320472213382419,0,0.490080431962063,7.9895365304059,35.345957179229,1.56512055366511,11.9569704546617,0,0,0,3.24621940274555,0,0,0,0,0,0,0,6.81353980304522,0,1.84344458585075,0.671028323677248,1.50164227540718,30.2851547873162,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,14.9122147164945,15.4736358051564,0,0,1.68900326502395,6.17668763578316,0,0.503865495708552,0.20453736500431,0,0.311039587661807,0.359473404589307,0.179021174675609,0,0.493217028184668,0,0,12.6013256992378,6.77207116581514,25.9497937401552,1.30213880542617,0,0,0.1137934482855,1.01701460117107,0.236387681767936,4.82640722538051,0,7.11862479226498,19.4863104879045,20.0190088118177,7.62908681585416,3.87027409759286,5.6154047601174,12.2855822406225,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0.611030144933625,0,0,0,11.9300005375798,0.802577647298789,15.4614534178724,24.8138513333306,0,0,0.789168805698781,0,16.834001889677,0.758238955541855,0.751617097072463,0.933193722575224,0,0,0,0,1.99226682220855,0,0.173559738335131,0,0.34823682632161,0,0,0,0,0,0.193978032976839,0,12.6549214837098,0,0,10.5095921286759,0.195551382734803,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,12.0084057741958,6.02383667124769,0,0.859530882839914,0,0.837847203816763,3.20824593616357,0.717873024576814,0,0,0.89268582976749,0.470284307407084,0,0,0,0,0,0,0,11.9284453471395,16.2082053272775,19.6118841127323,16.9173507014598,18.2793748732841,0,0,12.5751582282111,0,1.49730843868477,1.78345599658994,0,0,0,2.85878130549347,1.98627591109629,0,0,0,0,0,0.328370082997356,0,0,0,0,17.3239161524478,14.6778187934386,0,0,0.533937062838473,2.35806457649499,0.414239055347196,2.48083010905975,0,3.28840015628419,0.638341257770182,0,0,0,0,0,7.97461361970287,10.3722325166669,6.50992839673799,9.17454713104114,13.533344287496,20.6781021794807,0.415045904808692,1.62474530350739,0.454947352624943,0,0,16.8600566090477,46.0848870982424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0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| ||
|short_description=p4@APBB2 | |||
}} | }} |
Latest revision as of 19:02, 17 September 2015
Short description: | p4@APBB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APBB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000502841, ENST00000504305, ENST00000543538, NM_001166051, NM_001166052, uc003gvk.2_5end |
EntrezGene: | APBB2 |
HGNC: | 582 |
UniProt: | B4DSL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.11e-12 | 14 |
neuronal stem cell | 1.42e-11 | 8 |
neuron | 8.31e-09 | 6 |
neuroblast | 8.31e-09 | 6 |
electrically signaling cell | 8.31e-09 | 6 |
neural cell | 1.47e-08 | 25 |
lymphocyte of B lineage | 5.05e-08 | 24 |
pro-B cell | 5.05e-08 | 24 |