FFCP PHASE1:Hg19::chr4:120549851..120549880,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:120549851..120549880,- to FFCP PHASE1:Hg19::chr4:120549851..120549880,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8654 | |EntrezGene=8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |HGNC=8784 | ||
|TSSclassifier=strong | |||
|UniProt=O76074 | |UniProt=O76074 | ||
|association_with_transcript=100bp_to_NM_001083,uc003idh.2_5end | |||
|cluster_id=chr4:120549851..120549880,- | |||
|coexpression_cluster_id=C1933 | |||
|description=CAGE_peak_1_at_PDE5A_5end | |||
|id=chr4:120549851..120549880,- | |||
|ontology_enrichment_celltype=CL:0000055!6.46e-15!180;CL:0000057!2.93e-10!75;CL:0000393!7.36e-07!60;CL:0000211!7.36e-07!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.08e-10,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!9.93e-11!347;UBERON:0001007!7.95e-10!155;UBERON:0001555!7.95e-10!155;UBERON:0007026!7.95e-10!155;UBERON:0004119!4.47e-09!169;UBERON:0000925!4.47e-09!169;UBERON:0006595!4.47e-09!169;UBERON:0000468!1.06e-07!659;UBERON:0003104!4.31e-07!238;UBERON:0009142!4.31e-07!238;UBERON:0000475!5.84e-07!365;UBERON:0000914!7.21e-07!83;UBERON:0002329!7.21e-07!83;UBERON:0003077!7.21e-07!83;UBERON:0003059!7.21e-07!83;UBERON:0007282!7.21e-07!83;UBERON:0009618!7.21e-07!83;UBERON:0007285!7.21e-07!83;UBERON:0002385!7.55e-07!63;UBERON:0001015!7.55e-07!63;UBERON:0000383!7.55e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.51e-10;22!UBERON:0000160;4.00e-10;17!UBERON:0004921;3.87e-09;33!UBERON:0000059;1.61e-07;11!UBERON:0000075;6.52e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,2.29e-10,145;UBERON:0001555,2.29e-10,145;UBERON:0007026,2.29e-10,145;UBERON:0000160,3.70e-10,17;UBERON:0004119,1.39e-08,160;UBERON:0000925,1.39e-08,160;UBERON:0006595,1.39e-08,160;UBERON:0005409,2.23e-08,25;UBERON:0004921,1.29e-07,118;UBERON:0000059,1.41e-07,11;UBERON:0000075,6.30e-07,16;UBERON:0003104,6.58e-07,160;UBERON:0009142,6.58e-07,160 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.986680828671798,0,0.893922188854576,0.872338524100369,0,0,0,1.22866968250754,0,0,0,7.30221482464275,10.6047160232933,0,0,1.46062018077475,0,0.123121058076788,2.85600967741954,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,1.44575660953827,3.00802746381534,1.59331170856906,0,1.94653948121054,1.70162670895322,5.09977614163897,2.54720878510066,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,1.25849830862972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,3.03913227994991,10.1955069226178,8.03142538096678,6.73869926176878,5.60677600142307,1.06748995729705,1.2333377420858,0,0.134710672069688,0.163461903113459,0.908144565869588,3.45705554687999,0.937285727335186,0,0,0,0.117434498643765,0,0,2.44985005505872,0.859840221182376,0.929932030581889,3.56400857184616,6.18167323196392,0.910161361938026,1.43723628363248,3.36672227908132,2.25213335769535,3.3247693858102,19.7539929396377,6.12975591598039,3.90618953157152,0.453728732640084,2.87023417102179,1.06778694409284,2.7551147150743,0.900273288253207,1.03052529238439,7.9868567414145,4.83903826462134,0.168776332241266,0.584622030967192,5.80597680761463,1.65689817556139,7.43571861366535,3.55009592516614,2.11579406278045,2.20428770003634,0.966304265816484,0,0,3.90315859614705,5.69878003782387,5.46111531486736,3.62813692553797,6.56034212276634,7.66452454059243,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0.505754070234305,0.241011029883482,0.55146986366197,0.435758888184812,0.71181185733329,0.134831308160164,0.588664395376038,0,0,0,1.2347220339942,0,0,0,0,0,2.7057456479485,10.8087720488071,0,0,0.100528972411631,0.0925884451585296,0,3.11980435583874,2.88662684050547,0.695582429850461,4.93116515790451,0.144366447761074,0.462985512576611,0,0.790204397959275,2.57545848628462,0,0,0,0,0.671928512795438,0.425325291727159,0.0895585227028483,0,0.383382679165211,0.492663237895943,0,0.207328115540772,0.432359860250884,0.75745460055828,0,0,0,0,0,0,0.285826432630578,0.112131084345361,2.1798003441664,0.4400297149257,2.58543431515556,0,0,4.78688609852767,7.28052058379563,0.257207374262142,0,0,23.8773249409106,0,0,0,20.2573410783251,1.58390374586686,2.41151501647669,2.61460037580088,1.29964888536674,0,0,0,4.0736225433569,4.59447743336456,1.42636905040718,0.289562613335158,1.02738161275192,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0.414415513436035,9.93801082925033,10.5035809422532,5.42530047399471,2.9115920614313,1.78428988797162,0.630809660135739,1.63997980989798,0.300946099727719,0,3.10419213877515,0.664225598535437,1.10621501125022,1.39013783148933,1.56640925970192,1.71571711905428,0.206768026122887,0.862856803274467,0,0.606255142892519,0,0.30239029332968,1.24053903909388,3.52962538562544,2.24528075546459,3.97231362692673,2.55853624533352,3.53878626515936,1.48418066444991,0.154209693802656,0.710246901252508,1.64254312027618,4.67328986265259,0.464841513839837,2.65890789101569,0.200506470303285,0,65.3294210056612,37.8749629453971,67.0045760442657,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0.984043937099117,1.30151357865721,0.824328093181778,6.59300146692073,5.11558899507645,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0.413509717453592,0.429680979473094,0.435050081742686,0.0852266274161009,1.24644849905432,0.165284915360978,0.576570202095319,0,0.30347334256665,3.71876439437829,10.7036197922418,1.3940745403212,1.23213432070436,1.59691809095107,0.869932992075073,0,1.71749864090389,2.232950216158,0.949138274156178,0,0.767693373934002,4.70732886837312,0.95460974377781,0,43.8888796503288,39.2587952522558,24.6227920902485,0.808729926293264,4.75530963519025,0,12.1908434772398,1.46228093778771,1.05650146756755,23.7509845849895,55.4309293258554,0,3.30819206127675,1.32687795048244,2.19225442626881,3.47265320560013,11.8061055368394,1.42037263873893,0.6196469961995,1.40847801266121,0.717056761020258,0.196498082026242,0.35667105148125,5.67617702512956,0.211107635297664,0.658589785919804,1.51789269506286,2.44954304171488,0.0962221127255121,0,0,1.22386941009813,0,0,0,0.229723400206959,2.02979043692868,1.52927441428475,4.5571774973933,1.42939065274673,0.822724546172388,2.59389324477087,1.08006287447623,0.79312517629427,0.106824071127473,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16364542780786,0,0,2.24568648489864,0.146508179271894,0.242721043499027,0,0,0.71623345421307,0,0.921482106297696,0,0.140669416410513,1.44701316529778,0,1.05562704063997,3.78571177677032,2.21027132424918,11.0850409055881,4.60209071259697,0,0.933118762985422,2.51631383212515,0.537063524026827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| ||
|short_description=p1@PDE5A | |||
}} | }} |
Latest revision as of 23:01, 24 September 2015
Short description: | p1@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDE5A_5end |
Coexpression cluster: | C1933_glioblastoma_small_Prostate_Smooth_rhabdomyosarcoma_normal_sacrococcigeal |
Association with transcript: | 100bp_to_NM_001083, uc003idh.2_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | O76074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.08e-10 | 76 |
Ontology term | p-value | n |
---|---|---|
digestive system | 2.29e-10 | 145 |
digestive tract | 2.29e-10 | 145 |
primitive gut | 2.29e-10 | 145 |
intestine | 3.70e-10 | 17 |
endoderm-derived structure | 1.39e-08 | 160 |
endoderm | 1.39e-08 | 160 |
presumptive endoderm | 1.39e-08 | 160 |
gastrointestinal system | 2.23e-08 | 25 |
subdivision of digestive tract | 1.29e-07 | 118 |
large intestine | 1.41e-07 | 11 |
subdivision of skeletal system | 6.30e-07 | 16 |
mesenchyme | 6.58e-07 | 160 |
entire embryonic mesenchyme | 6.58e-07 | 160 |