FFCP PHASE1:Hg19::chr4:120548779..120548825,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:120548779..120548825,- to FFCP PHASE1:Hg19::chr4:120548779..120548825,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8654 | |EntrezGene=8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |HGNC=8784 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000264805_5end | |||
|cluster_id=chr4:120548779..120548825,- | |||
|coexpression_cluster_id=C1271 | |||
|description=CAGE_peak_8_at_PDE5A_5end | |||
|id=chr4:120548779..120548825,- | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-12!180;CL:0000057!4.63e-10!75;CL:0000192!8.27e-10!42;CL:0000514!8.27e-10!42;CL:0000187!5.84e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:1000306;3.01e-08;4!CL:0002547;3.01e-08;4!CL:0002622;7.92e-08;3!CL:0002504;3.91e-07;3!CL:1000279;3.91e-07;3!CL:1000280;3.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,6.56e-08,4;CL:0002547,6.56e-08,4;CL:0002622,7.85e-08,3;CL:0000192,1.37e-07,43;CL:0000514,1.37e-07,43;CL:0002504,4.16e-07,3;CL:1000279,4.16e-07,3;CL:1000280,4.16e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-16!115;UBERON:0000475!3.98e-10!365;UBERON:0000481!2.90e-08!347;UBERON:0000468!2.06e-07!659;UBERON:0002385!2.41e-07!63;UBERON:0001015!2.41e-07!63;UBERON:0000383!2.41e-07!63;UBERON:0000477!3.34e-07!286;UBERON:0000153!3.56e-07!129;UBERON:0007811!3.56e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;3.02e-09;22!UBERON:0000079;3.02e-09;22!UBERON:0004797;3.01e-08;4!UBERON:0000415;3.01e-08;4!UBERON:0007240;3.01e-08;4!UBERON:0005742;3.01e-08;4!UBERON:0005734;3.01e-08;4!UBERON:0004664;3.01e-08;4!UBERON:0004663;3.01e-08;4!UBERON:0003937;6.27e-08;12!UBERON:0005399;6.27e-08;12!UBERON:0005904;6.47e-08;4!UBERON:0002367;9.69e-07;11!UBERON:0010147;9.69e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004797,1.22e-09,7;UBERON:0003101,2.21e-09,22;UBERON:0000079,2.21e-09,22;UBERON:0005904,4.68e-08,4;UBERON:0003937,5.29e-08,12;UBERON:0005399,5.29e-08,12;UBERON:0000415,6.56e-08,4;UBERON:0007240,6.56e-08,4;UBERON:0005742,6.56e-08,4;UBERON:0005734,6.56e-08,4;UBERON:0004664,6.56e-08,4;UBERON:0004663,6.56e-08,4;UBERON:0002367,8.05e-07,11;UBERON:0010147,8.05e-07,11;UBERON:0009846,8.05e-07,11;UBERON:0003353,8.05e-07,11;UBERON:0004902,8.05e-07,11;UBERON:0003820,8.05e-07,11;UBERON:0009847,8.05e-07,11 | |||
|phase1_expression=0.181678379270557,0,1.26858963686374,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,1.23766352960047,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00535164254356,0.869079113764942,0,0,0.283604451492204,0.221729397462564,0.351339142772504,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,2.02608818663328,2.38336525463794,2.0078563452417,1.06400514659507,1.12135520028461,0,0,0,0,0,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.368502951935304,0.103325781175765,3.56400857184616,5.43987244412825,0.910161361938026,0,0.168336113954066,0.250237039743928,0.277064115484183,7.46261955497424,13.4854630151569,2.40380894250555,0.226864366320042,0.89694817844431,0.427114777637135,1.05965950579781,0.600182192168805,0.309157587715317,0.515281080091258,1.30281799432113,0.168776332241266,0.194874010322397,0.252433774244115,0.828449087780694,3.71785930683267,0.710019185033229,0.705264687593482,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,1.44331342025273,0,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,1.74384027533312,0.07333828582095,0.775630294546667,0,0,1.32969058292435,3.12022310734098,0,0,0,3.57444984145369,0,0,0,3.55391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,1.4377491329495,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,2.69921281782108,2.50085260529839,0.271265023699736,1.24782516918484,0.356857977594324,0.315404830067869,0.35142424497814,0.300946099727719,0,2.0694614258501,0.664225598535437,0.368738337083406,0.695068915744663,0.979005787313703,0,0,0,0,0,0,0,1.24053903909388,1.07423381301644,0.280660094433074,0.640695746278505,0.511707249066704,1.93024705372329,1.48418066444991,0,0.177561725313127,0.246381468041427,1.55776328755086,0.116210378459959,0,0,0,13.7777337797528,14.9314757765508,22.2911505431021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,1.19040304263846,2.0627374980147,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.356128142586949,0.165284915360978,0,0,0,1.39453664789186,1.5740617341532,0,0.308033580176089,0,0.869932992075073,0.18532421910392,1.43124886741991,1.116475108079,0,0.190630193923825,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,3.41757669408298,2.47083326762449,3.06312246098785,0.202182481573316,6.34041284692033,0,1.46290121726877,1.21856744815642,0,8.73599433011109,13.1507051716953,1.13008116620243,0,0.66343897524122,3.5076070820301,0,2.62357900818653,0.608731130888112,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,1.07001315444375,0.709522128141196,0.211107635297664,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,2.02979043692868,1.52927441428475,2.27858874869665,0.238231775457789,0.411362273086194,1.94541993357815,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,2.59022384726391,1.93398740871803,0,0.102268682502155,0,0.311039587661807,0,0,0,0.690503839458535,0,1.11136990144637,0,0.834912883456661,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.482385754501632,1.52581736317083,0.774054819518572,0,0.658156191461918,0,3.62501735124369,0.846452843541768,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.707660516026713,0.611030144933625,0,0,0,0.67401132980677,0.802577647298789,0,0,0,0,2.36750641709634,0,0.30607276163049,9.09886746650227,0,0,0,0,0,0,0,0.138674673013139,0,0,0,2.44617335538842,0,0,0,0,1.93978032976839,0,1.12990370390266,0,0,0.696418755514666,0,0,0.213452994739353,0.599428828746391,0,0,0,0,0,0,0.135904206073614,0,16.6257094747205,0,0,0.273810757783986,0,0.859530882839914,0,2.23425921017803,2.52076466412852,0,0,0,0.223171457441873,1.34366944973453,1.08089965062721,0,0,0,0,0.295282444544246,0,0,0.953423842781029,0.321506296930038,0,0,0,0,0.364497339948148,0,0.315222829196793,0.524545881349981,0,0,0.191915197319445,0.714695326373367,0,0,4.88699641578341,1.72844298240254,0.979762080328227,0,0,0,1.58636928128176,0,0,0.129282956361551,0.39669780522807,0,0,1.17466153824464,2.35806457649499,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0.1251909307065,0,0.443716206147409,1.05563885000352,0,0,0,0,0,0,0,0,0,0,1.32582103692562,4.52822223154635,1.77962244319307,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0,0,1.14241563650639,0.406870733204662,0,0,0,0,0,0,0.673498977531838,7.57109389371906,0,0,0,0.453411851024545,0.463044948647668,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0.636008701306837,0,0,0,5.5124185923576,0.578063025868136,0,0.798169295285756,0.615349092722265,0.252071696221718,0.553258019713743,0.322951291263702,0,0,0,0,0.577628330751691,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0.540300676947157,0,0.206686796501184,0.507326481551255,0.546974809018219,0,5.45832296228224,0,0.127762427639595,0,1.00885116665647,0,0,0.177404740325278,0,0,1.22345519358297,0.328863867814245,0,0.111231401892069,1.64835494986079,0,0,1.82631744101899,0,0,1.92986669276972,0,2.67355278346688,0,9.62053637676303,0,0,0,0.430227358820278,0,0,1.27016115057279,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0.198950775161368,0.118920090777569,0.90356865631168,0,0,0.463044948647668,2.40415516554353,0,3.43207650455468,0,0,0,2.113278637917,0.509781344063451,0,0.257831551894309,0,0,0,0.320965466756673,0.730336388246517,0.458729283404541,0.716697915757256,0,0.135982980381829,0.436350690340377,1.5870805215462,0,3.23522940041993,0.432626562123789,0,0,0,0,0,0,0,0.985123076837112,0,0,0.103432995861895,0.639701945702943,1.1903221573187,0.0645889098360061,0.31037357147929,0,0.25458863311266,0.808468755832877,0.217716747896961,0.684466602170562,0.0673520530145875,0.502055437748735,0.665320713092027,0,0.106727345877715,0,0,0,1.22241444182866,1.62758471326295,0,1.40891655513718,0 | |phase1_expression=0.181678379270557,0,1.26858963686374,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,1.23766352960047,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00535164254356,0.869079113764942,0,0,0.283604451492204,0.221729397462564,0.351339142772504,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,2.02608818663328,2.38336525463794,2.0078563452417,1.06400514659507,1.12135520028461,0,0,0,0,0,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.368502951935304,0.103325781175765,3.56400857184616,5.43987244412825,0.910161361938026,0,0.168336113954066,0.250237039743928,0.277064115484183,7.46261955497424,13.4854630151569,2.40380894250555,0.226864366320042,0.89694817844431,0.427114777637135,1.05965950579781,0.600182192168805,0.309157587715317,0.515281080091258,1.30281799432113,0.168776332241266,0.194874010322397,0.252433774244115,0.828449087780694,3.71785930683267,0.710019185033229,0.705264687593482,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,1.44331342025273,0,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,1.74384027533312,0.07333828582095,0.775630294546667,0,0,1.32969058292435,3.12022310734098,0,0,0,3.57444984145369,0,0,0,3.55391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,1.4377491329495,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,2.69921281782108,2.50085260529839,0.271265023699736,1.24782516918484,0.356857977594324,0.315404830067869,0.35142424497814,0.300946099727719,0,2.0694614258501,0.664225598535437,0.368738337083406,0.695068915744663,0.979005787313703,0,0,0,0,0,0,0,1.24053903909388,1.07423381301644,0.280660094433074,0.640695746278505,0.511707249066704,1.93024705372329,1.48418066444991,0,0.177561725313127,0.246381468041427,1.55776328755086,0.116210378459959,0,0,0,13.7777337797528,14.9314757765508,22.2911505431021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,1.19040304263846,2.0627374980147,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.356128142586949,0.165284915360978,0,0,0,1.39453664789186,1.5740617341532,0,0.308033580176089,0,0.869932992075073,0.18532421910392,1.43124886741991,1.116475108079,0,0.190630193923825,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,3.41757669408298,2.47083326762449,3.06312246098785,0.202182481573316,6.34041284692033,0,1.46290121726877,1.21856744815642,0,8.73599433011109,13.1507051716953,1.13008116620243,0,0.66343897524122,3.5076070820301,0,2.62357900818653,0.608731130888112,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,1.07001315444375,0.709522128141196,0.211107635297664,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,2.02979043692868,1.52927441428475,2.27858874869665,0.238231775457789,0.411362273086194,1.94541993357815,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,2.59022384726391,1.93398740871803,0,0.102268682502155,0,0.311039587661807,0,0,0,0.690503839458535,0,1.11136990144637,0,0.834912883456661,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.482385754501632,1.52581736317083,0.774054819518572,0,0.658156191461918,0,3.62501735124369,0.846452843541768,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.707660516026713,0.611030144933625,0,0,0,0.67401132980677,0.802577647298789,0,0,0,0,2.36750641709634,0,0.30607276163049,9.09886746650227,0,0,0,0,0,0,0,0.138674673013139,0,0,0,2.44617335538842,0,0,0,0,1.93978032976839,0,1.12990370390266,0,0,0.696418755514666,0,0,0.213452994739353,0.599428828746391,0,0,0,0,0,0,0.135904206073614,0,16.6257094747205,0,0,0.273810757783986,0,0.859530882839914,0,2.23425921017803,2.52076466412852,0,0,0,0.223171457441873,1.34366944973453,1.08089965062721,0,0,0,0,0.295282444544246,0,0,0.953423842781029,0.321506296930038,0,0,0,0,0.364497339948148,0,0.315222829196793,0.524545881349981,0,0,0.191915197319445,0.714695326373367,0,0,4.88699641578341,1.72844298240254,0.979762080328227,0,0,0,1.58636928128176,0,0,0.129282956361551,0.39669780522807,0,0,1.17466153824464,2.35806457649499,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0.1251909307065,0,0.443716206147409,1.05563885000352,0,0,0,0,0,0,0,0,0,0,1.32582103692562,4.52822223154635,1.77962244319307,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0,0,1.14241563650639,0.406870733204662,0,0,0,0,0,0,0.673498977531838,7.57109389371906,0,0,0,0.453411851024545,0.463044948647668,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0.636008701306837,0,0,0,5.5124185923576,0.578063025868136,0,0.798169295285756,0.615349092722265,0.252071696221718,0.553258019713743,0.322951291263702,0,0,0,0,0.577628330751691,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0.540300676947157,0,0.206686796501184,0.507326481551255,0.546974809018219,0,5.45832296228224,0,0.127762427639595,0,1.00885116665647,0,0,0.177404740325278,0,0,1.22345519358297,0.328863867814245,0,0.111231401892069,1.64835494986079,0,0,1.82631744101899,0,0,1.92986669276972,0,2.67355278346688,0,9.62053637676303,0,0,0,0.430227358820278,0,0,1.27016115057279,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0.198950775161368,0.118920090777569,0.90356865631168,0,0,0.463044948647668,2.40415516554353,0,3.43207650455468,0,0,0,2.113278637917,0.509781344063451,0,0.257831551894309,0,0,0,0.320965466756673,0.730336388246517,0.458729283404541,0.716697915757256,0,0.135982980381829,0.436350690340377,1.5870805215462,0,3.23522940041993,0.432626562123789,0,0,0,0,0,0,0,0.985123076837112,0,0,0.103432995861895,0.639701945702943,1.1903221573187,0.0645889098360061,0.31037357147929,0,0.25458863311266,0.808468755832877,0.217716747896961,0.684466602170562,0.0673520530145875,0.502055437748735,0.665320713092027,0,0.106727345877715,0,0,0,1.22241444182866,1.62758471326295,0,1.40891655513718,0 | ||
|short_description=p8@PDE5A | |||
}} | }} |
Latest revision as of 22:53, 24 September 2015
Short description: | p8@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PDE5A_5end |
Coexpression cluster: | C1271_Prostate_sacrococcigeal_glioblastoma_penis_Fibroblast_Smooth_aorta |
Association with transcript: | 0bp_to_ENST00000264805_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 6.56e-08 | 4 |
fibroblast of the aortic adventitia | 6.56e-08 | 4 |
prostate stromal cell | 7.85e-08 | 3 |
smooth muscle cell | 1.37e-07 | 43 |
smooth muscle myoblast | 1.37e-07 | 43 |
enteric smooth muscle cell | 4.16e-07 | 3 |
smooth muscle cell of large intestine | 4.16e-07 | 3 |
smooth muscle cell of colon | 4.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel layer | 1.22e-09 | 7 |
male organism | 2.21e-09 | 22 |
male reproductive system | 2.21e-09 | 22 |
duct of male reproductive system | 4.68e-08 | 4 |
sex gland | 5.29e-08 | 12 |
male reproductive gland | 5.29e-08 | 12 |
artery wall | 6.56e-08 | 4 |
tunica adventitia of artery | 6.56e-08 | 4 |
adventitia | 6.56e-08 | 4 |
tunica adventitia of blood vessel | 6.56e-08 | 4 |
aorta tunica adventitia | 6.56e-08 | 4 |
aorta wall | 6.56e-08 | 4 |
prostate gland | 8.05e-07 | 11 |
male accessory sex gland | 8.05e-07 | 11 |
embryonic cloacal epithelium | 8.05e-07 | 11 |
epithelium of hindgut | 8.05e-07 | 11 |
urogenital sinus epithelium | 8.05e-07 | 11 |
prostate bud | 8.05e-07 | 11 |
prostate field | 8.05e-07 | 11 |