FFCP PHASE1:Hg19::chr3:68055366..68055385,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:68055366..68055385,+ to FFCP PHASE1:Hg19::chr3:68055366..68055385,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=407738 | |EntrezGene=407738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21587 | |HGNC=21587 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5A9 | |UniProt=Q7Z5A9 | ||
|association_with_transcript=0bp_to_ENST00000496687,uc003dng.2_5end | |||
|cluster_id=chr3:68055366..68055385,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_FAM19A1_5end | |||
|id=chr3:68055366..68055385,+ | |||
|ontology_enrichment_celltype=CL:0000047!7.71e-12!8;CL:0000242!2.60e-08!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.31e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.58e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.93e-86!82;UBERON:0005743!4.65e-82!86;UBERON:0001049!5.24e-81!57;UBERON:0005068!5.24e-81!57;UBERON:0006241!5.24e-81!57;UBERON:0007135!5.24e-81!57;UBERON:0000073!1.61e-73!94;UBERON:0001016!1.61e-73!94;UBERON:0002780!1.82e-65!41;UBERON:0001890!1.82e-65!41;UBERON:0006240!1.82e-65!41;UBERON:0002616!2.44e-65!59;UBERON:0000955!3.64e-65!69;UBERON:0006238!3.64e-65!69;UBERON:0002619!4.72e-64!22;UBERON:0003080!8.94e-64!42;UBERON:0001893!8.96e-64!34;UBERON:0002020!3.51e-63!34;UBERON:0003528!3.51e-63!34;UBERON:0001869!1.04e-62!32;UBERON:0002791!2.43e-60!33;UBERON:0001950!1.01e-56!20;UBERON:0000956!4.72e-56!25;UBERON:0000203!4.72e-56!25;UBERON:0003075!3.62e-54!86;UBERON:0007284!3.62e-54!86;UBERON:0002346!2.18e-51!90;UBERON:0007023!4.28e-43!115;UBERON:0003056!5.14e-42!61;UBERON:0004121!4.88e-41!169;UBERON:0000924!7.15e-40!173;UBERON:0006601!7.15e-40!173;UBERON:0000033!2.86e-35!123;UBERON:0000153!3.07e-33!129;UBERON:0007811!3.07e-33!129;UBERON:0001871!4.43e-23!7;UBERON:0000200!5.14e-23!6;UBERON:0000349!7.90e-20!5;UBERON:0000025!3.91e-19!194;UBERON:0003076!1.31e-17!15;UBERON:0003057!1.31e-17!15;UBERON:0004111!9.59e-16!241;UBERON:0001872!5.59e-13!5;UBERON:0002021!6.92e-13!5;UBERON:0000477!9.58e-13!286;UBERON:0000483!5.59e-12!309;UBERON:0002771!6.17e-12!3;UBERON:0000475!8.06e-12!365;UBERON:0000119!8.98e-12!312;UBERON:0002240!1.96e-11!3;UBERON:0000988!2.53e-11!3;UBERON:0002298!5.72e-11!8;UBERON:0002420!2.03e-10!9;UBERON:0007245!2.03e-10!9;UBERON:0010009!2.03e-10!9;UBERON:0010011!2.03e-10!9;UBERON:0000454!2.03e-10!9;UBERON:0004733!4.59e-10!12;UBERON:0002028!4.59e-10!12;UBERON:0007277!4.59e-10!12;UBERON:0002308!7.84e-10!9;UBERON:0000125!7.84e-10!9;UBERON:0004732!3.03e-09!13;UBERON:0001870!3.12e-09!2;UBERON:0001954!4.63e-09!2;UBERON:0003022!4.63e-09!2;UBERON:0002421!4.63e-09!2;UBERON:0002600!4.63e-09!2;UBERON:0000369!5.61e-09!4;UBERON:0002435!5.61e-09!4;UBERON:0000204!5.61e-09!4;UBERON:0010082!5.61e-09!4;UBERON:0001876!6.85e-09!2;UBERON:0000064!2.04e-08!219;UBERON:0002148!8.74e-08!2;UBERON:0009662!8.74e-08!2;UBERON:0005174!4.89e-07!5;UBERON:0001137!4.89e-07!5;UBERON:0000923!6.52e-07!604;UBERON:0005291!6.52e-07!604;UBERON:0006598!6.52e-07!604;UBERON:0002532!6.52e-07!604;UBERON:0002050!6.98e-07!605;UBERON:0005423!6.98e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.06e-84;22!UBERON:0000956;6.82e-74;25!UBERON:0000203;6.82e-74;25!UBERON:0001950;1.67e-71;20!UBERON:0001869;2.40e-64;32!UBERON:0002791;2.46e-58;32!UBERON:0001893;6.74e-57;34!UBERON:0003528;2.55e-53;34!UBERON:0002020;2.55e-53;34!UBERON:0002780;5.26e-40;41!UBERON:0001890;5.26e-40;41!UBERON:0000349;3.73e-34;5!UBERON:0000073;3.20e-28;53!UBERON:0002616;3.20e-28;53!UBERON:0001871;9.01e-25;6!UBERON:0002021;3.29e-22;5!UBERON:0001017;2.35e-21;75!UBERON:0000955;2.02e-20;68!UBERON:0000200;6.25e-19;6!UBERON:0001016;1.27e-18;83!UBERON:0001954;5.32e-15;2!UBERON:0003022;5.32e-15;2!UBERON:0002421;5.32e-15;2!UBERON:0002600;5.32e-15;2!UBERON:0001876;1.15e-14;2!UBERON:0001872;3.36e-13;5!UBERON:0001870;1.78e-10;3!UBERON:0002022;1.46e-08;1!UBERON:0007023;2.30e-08;114!UBERON:0002581;2.50e-08;1!UBERON:0007190;2.50e-08;1!UBERON:0002902;4.89e-08;1!UBERON:0001882;4.89e-08;1!UBERON:0009899;4.89e-08;1!UBERON:0005403;4.89e-08;1!UBERON:0011216;6.79e-08;132!UBERON:0002420;2.44e-07;9!UBERON:0007245;2.44e-07;9!UBERON:0010009;2.44e-07;9!UBERON:0010011;2.44e-07;9!UBERON:0000454;2.44e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.13e-84,22;UBERON:0000956,7.87e-74,25;UBERON:0000203,7.87e-74,25;UBERON:0001869,3.32e-72,32;UBERON:0001950,1.91e-71,20;UBERON:0001893,7.07e-68,34;UBERON:0002791,1.36e-64,32;UBERON:0003528,1.04e-60,34;UBERON:0002020,1.04e-60,34;UBERON:0001017,3.59e-56,81;UBERON:0002780,5.69e-56,41;UBERON:0001890,5.69e-56,41;UBERON:0003080,5.69e-56,41;UBERON:0006240,5.69e-56,41;UBERON:0001016,3.02e-50,89;UBERON:0000955,4.04e-48,68;UBERON:0006238,4.04e-48,68;UBERON:0000073,1.69e-47,53;UBERON:0002616,1.69e-47,53;UBERON:0001049,8.41e-45,56;UBERON:0005068,8.41e-45,56;UBERON:0006241,8.41e-45,56;UBERON:0007135,8.41e-45,56;UBERON:0003056,9.41e-37,61;UBERON:0000349,2.55e-34,5;UBERON:0003075,1.41e-29,82;UBERON:0007284,1.41e-29,82;UBERON:0002346,4.83e-28,86;UBERON:0004121,1.41e-26,171;UBERON:0000924,1.41e-26,171;UBERON:0006601,1.41e-26,171;UBERON:0010371,4.19e-25,104;UBERON:0001871,1.13e-24,6;UBERON:0002021,3.89e-22,5;UBERON:0007023,3.46e-20,114;UBERON:0011216,2.42e-19,223;UBERON:0000200,6.26e-19,6;UBERON:0010314,5.22e-17,132;UBERON:0001954,5.52e-15,2;UBERON:0003022,5.52e-15,2;UBERON:0002421,5.52e-15,2;UBERON:0002600,5.52e-15,2;UBERON:0001876,1.11e-14,2;UBERON:0001872,2.78e-13,5;UBERON:0000025,1.64e-10,192;UBERON:0001870,1.70e-10,3;UBERON:0002022,1.52e-08,1;UBERON:0007190,2.33e-08,1;UBERON:0002581,2.50e-08,1;UBERON:0001882,3.33e-08,1;UBERON:0005403,3.33e-08,1;UBERON:0002902,4.72e-08,1;UBERON:0009899,4.72e-08,1;UBERON:0004111,1.21e-07,240;UBERON:0002420,2.14e-07,9;UBERON:0007245,2.14e-07,9;UBERON:0010009,2.14e-07,9;UBERON:0010011,2.14e-07,9;UBERON:0000454,2.14e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,2.60279707715243,0.773288812777695,5.52803675603351,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.40669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.39152147242777,11.9768278800717,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,8.26396456402323,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,3.22885059374981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.54275627771164,1.63444087333891,0,0,0,0,0,4.31321852271975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,2.07444650333337,0.751145584238999,0,0.332787154610557,0.310482014706917,0,0,0,0,0,1.87333962322753,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99110597799025,0,1.43670473151436,2.2562800066483,3.02486035466062,1.65977405914123,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4988906308806,0,0.826747186004736,1.96589011601111,10.3925213713462,0,0,0,0,0,0,0,0.227662191351298,0,0,0,1.76721305739762,2.43359262182542,0,0,0.156986185701028,0.942693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,2.03974470572744,4.79985759374415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,2.60279707715243,0.773288812777695,5.52803675603351,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.40669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.39152147242777,11.9768278800717,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,8.26396456402323,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,3.22885059374981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.54275627771164,1.63444087333891,0,0,0,0,0,4.31321852271975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,2.07444650333337,0.751145584238999,0,0.332787154610557,0.310482014706917,0,0,0,0,0,1.87333962322753,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99110597799025,0,1.43670473151436,2.2562800066483,3.02486035466062,1.65977405914123,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4988906308806,0,0.826747186004736,1.96589011601111,10.3925213713462,0,0,0,0,0,0,0,0.227662191351298,0,0,0,1.76721305739762,2.43359262182542,0,0,0.156986185701028,0.942693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,2.03974470572744,4.79985759374415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@FAM19A1 | |||
}} | }} |
Latest revision as of 11:05, 19 September 2015
Short description: | p3@FAM19A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM19A1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000496687, uc003dng.2_5end |
EntrezGene: | FAM19A1 |
HGNC: | 21587 |
UniProt: | Q7Z5A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.31e-08 | 8 |