FFCP PHASE1:Hg19::chr3:50229037..50229052,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2779 | |EntrezGene=2779 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4393 | |HGNC=4393 | ||
|TSSclassifier=strong | |||
|UniProt=P11488 | |UniProt=P11488 | ||
|association_with_transcript=0bp_to_ENST00000232461,NM_000172,NM_144499,uc003cyl.2,uc003cym.2_5end | |||
|cluster_id=chr3:50229037..50229052,+ | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_1_at_GNAT1_5end | |||
|id=chr3:50229037..50229052,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.63e-09;4!CL:0002222;1.63e-09;4!CL:0002224;1.63e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.57e-09,4;CL:0002222,1.57e-09,4;CL:0002224,1.57e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.37e-44;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!8.98e-41!2;UBERON:0002757!8.98e-41!2;UBERON:0010134!8.98e-41!2;UBERON:0002784!8.98e-41!2;UBERON:0005408!8.98e-41!2;UBERON:0001899!8.98e-41!2;UBERON:0003296!5.72e-21!4;UBERON:0010133!5.72e-21!4;UBERON:0000966!5.91e-17!5;UBERON:0005388!5.91e-17!5;UBERON:0001802!5.91e-17!5;UBERON:0000970!2.20e-16!20;UBERON:0002104!1.26e-15!21;UBERON:0000020!2.65e-14!23;UBERON:0001032!1.01e-13!24;UBERON:0004456!1.01e-13!24;UBERON:0001894!2.00e-12!7;UBERON:0006222!2.00e-12!7;UBERON:0002360!3.35e-11!2;UBERON:0000094!3.35e-11!2;UBERON:0007645!3.35e-11!2;UBERON:0003127!3.70e-11!2;UBERON:0000019!4.17e-10!19;UBERON:0000047!4.17e-10!19;UBERON:0004088!4.17e-10!19;UBERON:0003072!4.17e-10!19;UBERON:0003071!4.17e-10!19;UBERON:0004128!4.17e-10!19;UBERON:0001456!3.35e-09!21;UBERON:0003056!3.55e-08!61;UBERON:0003075!3.63e-08!86;UBERON:0007284!3.63e-08!86;UBERON:0002346!8.44e-08!90;UBERON:0005085!8.09e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.84e-66;2!UBERON:0002757;2.84e-66;2!UBERON:0010134;2.84e-66;2!UBERON:0005408;2.84e-66;2!UBERON:0001899;2.84e-66;2!UBERON:0003296;8.36e-34;4!UBERON:0010133;8.36e-34;4!UBERON:0002784;8.36e-34;4!UBERON:0000966;2.91e-27;5!UBERON:0005388;2.91e-27;5!UBERON:0001802;2.91e-27;5!UBERON:0000970;7.25e-27;20!UBERON:0002104;1.27e-25;21!UBERON:0000020;1.84e-23;23!UBERON:0001032;1.63e-22;24!UBERON:0004456;1.63e-22;24!UBERON:0001894;7.84e-20;7!UBERON:0000019;2.52e-16;19!UBERON:0000047;2.52e-16;19!UBERON:0004088;2.52e-16;19!UBERON:0010230;2.52e-16;19!UBERON:0001456;7.53e-15;21!UBERON:0010077;1.63e-09;4!UBERON:0005389;1.63e-09;4!UBERON:0000484;1.63e-09;4!UBERON:0000965;1.63e-09;4!UBERON:0001803;1.63e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.84e-66,2;UBERON:0002757,2.84e-66,2;UBERON:0010134,2.84e-66,2;UBERON:0005408,2.84e-66,2;UBERON:0001899,2.84e-66,2;UBERON:0003296,8.36e-34,4;UBERON:0010133,8.36e-34,4;UBERON:0002784,8.36e-34,4;UBERON:0000970,1.27e-25,21;UBERON:0002104,1.27e-25,21;UBERON:0000966,6.78e-23,6;UBERON:0005388,6.78e-23,6;UBERON:0001802,6.78e-23,6;UBERON:0000020,1.63e-22,24;UBERON:0001032,1.63e-22,24;UBERON:0004456,1.63e-22,24;UBERON:0001894,7.84e-20,7;UBERON:0006222,7.84e-20,7;UBERON:0000019,1.50e-15,20;UBERON:0000047,1.50e-15,20;UBERON:0010312,1.50e-15,20;UBERON:0004088,1.50e-15,20;UBERON:0010230,1.50e-15,20;UBERON:0003072,1.50e-15,20;UBERON:0004128,1.50e-15,20;UBERON:0003071,1.50e-15,20;UBERON:0001456,3.27e-14,22;UBERON:0003056,9.68e-14,61;UBERON:0003075,2.22e-10,82;UBERON:0007284,2.22e-10,82;UBERON:0005085,2.60e-10,31;UBERON:0002346,6.36e-10,86;UBERON:0010077,1.57e-09,4;UBERON:0005389,1.57e-09,4;UBERON:0000484,1.57e-09,4;UBERON:0002546,1.57e-09,4;UBERON:0000965,1.57e-09,4;UBERON:0001803,1.57e-09,4;UBERON:0003073,1.57e-09,4;UBERON:0005426,1.57e-09,4;UBERON:0010371,2.74e-08,104;UBERON:0001444,8.92e-07,49 | |||
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|short_description=p1@GNAT1 | |||
}} | }} |
Latest revision as of 18:36, 18 September 2015
Short description: | p1@GNAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNAT1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000232461, NM_000172, NM_144499, uc003cyl.2, uc003cym.2_5end |
EntrezGene: | GNAT1 |
HGNC: | 4393 |
UniProt: | P11488 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.57e-09 | 4 |
vertebrate lens cell | 1.57e-09 | 4 |
lens epithelial cell | 1.57e-09 | 4 |