FFCP PHASE1:Hg19::chr3:189838731..189838748,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:189838731..189838748,+ to FFCP PHASE1:Hg19::chr3:189838731..189838748,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=40886 | |HGNC=40886 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000412203_5end | |||
|cluster_id=chr3:189838731..189838748,+ | |||
|coexpression_cluster_id=C631 | |||
|description=CAGE_peak_1_at_LEPREL1-AS1_5end | |||
|id=chr3:189838731..189838748,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;8.34e-09;6!CL:0000153;9.97e-08;9!CL:0000447;9.97e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.24e-08,6;CL:0000138,1.24e-08,6;CL:0000153,1.40e-07,9;CL:0000447,1.40e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!2.81e-19!86;UBERON:0007284!2.81e-19!86;UBERON:0002346!1.04e-18!90;UBERON:0001049!3.74e-17!57;UBERON:0005068!3.74e-17!57;UBERON:0006241!3.74e-17!57;UBERON:0007135!3.74e-17!57;UBERON:0003056!5.37e-17!61;UBERON:0002616!1.69e-15!59;UBERON:0005743!2.32e-15!86;UBERON:0004121!2.79e-15!169;UBERON:0000924!3.98e-15!173;UBERON:0006601!3.98e-15!173;UBERON:0000033!7.77e-15!123;UBERON:0000153!8.56e-15!129;UBERON:0007811!8.56e-15!129;UBERON:0000955!9.47e-15!69;UBERON:0006238!9.47e-15!69;UBERON:0001017!3.16e-14!82;UBERON:0007023!1.23e-13!115;UBERON:0002780!2.13e-13!41;UBERON:0001890!2.13e-13!41;UBERON:0006240!2.13e-13!41;UBERON:0000073!4.84e-13!94;UBERON:0001016!4.84e-13!94;UBERON:0003080!8.72e-13!42;UBERON:0000481!1.70e-12!347;UBERON:0000064!3.42e-12!219;UBERON:0000062!1.86e-11!511;UBERON:0002020!2.44e-11!34;UBERON:0003528!2.44e-11!34;UBERON:0001893!3.59e-11!34;UBERON:0002791!1.19e-10!33;UBERON:0001869!2.72e-10!32;UBERON:0000475!4.89e-10!365;UBERON:0000483!8.77e-09!309;UBERON:0000119!1.34e-08!312;UBERON:0001950!1.59e-08!20;UBERON:0000956!1.86e-08!25;UBERON:0000203!1.86e-08!25;UBERON:0002619!2.12e-08!22;UBERON:0000477!5.53e-07!286;UBERON:0000922!6.82e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000970;3.09e-11;20!UBERON:0002104;1.46e-10;21!UBERON:0001456;1.46e-10;21!UBERON:0000019;4.44e-10;19!UBERON:0000047;4.44e-10;19!UBERON:0004088;4.44e-10;19!UBERON:0010230;4.44e-10;19!UBERON:0007625;5.37e-10;11!UBERON:0001801;9.67e-10;14!UBERON:0000020;2.15e-09;23!UBERON:0001032;6.94e-09;24!UBERON:0004456;6.94e-09;24!UBERON:0000488;6.85e-08;4!UBERON:0002298;2.10e-07;6!UBERON:0002619;3.15e-07;22!UBERON:0000200;3.82e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,6.15e-21,104;UBERON:0003075,8.35e-19,82;UBERON:0007284,8.35e-19,82;UBERON:0002346,1.78e-17,86;UBERON:0003056,1.84e-14,61;UBERON:0001049,6.54e-12,56;UBERON:0005068,6.54e-12,56;UBERON:0006241,6.54e-12,56;UBERON:0007135,6.54e-12,56;UBERON:0004121,8.46e-12,171;UBERON:0000924,8.46e-12,171;UBERON:0006601,8.46e-12,171;UBERON:0010314,2.74e-11,132;UBERON:0005085,1.07e-10,31;UBERON:0000970,1.34e-10,21;UBERON:0002104,1.34e-10,21;UBERON:0000073,2.05e-10,53;UBERON:0002616,2.05e-10,53;UBERON:0007625,3.94e-10,11;UBERON:0001456,5.71e-10,22;UBERON:0001801,8.34e-10,14;UBERON:0000019,1.43e-09,20;UBERON:0000047,1.43e-09,20;UBERON:0010312,1.43e-09,20;UBERON:0004088,1.43e-09,20;UBERON:0010230,1.43e-09,20;UBERON:0003072,1.43e-09,20;UBERON:0004128,1.43e-09,20;UBERON:0003071,1.43e-09,20;UBERON:0000020,6.45e-09,24;UBERON:0001032,6.45e-09,24;UBERON:0004456,6.45e-09,24;UBERON:0000076,7.55e-09,8;UBERON:0001017,9.31e-09,81;UBERON:0000955,1.45e-08,68;UBERON:0006238,1.45e-08,68;UBERON:0000488,8.20e-08,4;UBERON:0000483,8.39e-08,306;UBERON:0000119,1.36e-07,309;UBERON:0002298,1.49e-07,6;UBERON:0002619,2.30e-07,22;UBERON:0001016,2.82e-07,89;UBERON:0000200,2.85e-07,6;UBERON:0007023,2.93e-07,114;UBERON:0002780,3.95e-07,41;UBERON:0001890,3.95e-07,41;UBERON:0003080,3.95e-07,41;UBERON:0006240,3.95e-07,41;UBERON:0003528,4.23e-07,34;UBERON:0002020,4.23e-07,34;UBERON:0001893,6.59e-07,34;UBERON:0001950,7.39e-07,20 | |||
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| ||
|short_description=p1@LEPREL1-AS1 | |||
}} | }} |
Latest revision as of 09:34, 17 September 2015
Short description: | p1@LEPREL1-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LEPREL1-AS1_5end |
Coexpression cluster: | C631_b_plasma_xeroderma_lymphoma_splenic_Burkitt_B |
Association with transcript: | -4bp_to_ENST00000412203_5end |
EntrezGene: | NA |
HGNC: | 40886 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.24e-08 | 6 |
chondrocyte | 1.24e-08 | 6 |
GAG secreting cell | 1.40e-07 | 9 |
carbohydrate secreting cell | 1.40e-07 | 9 |