FFCP PHASE1:Hg19::chr3:159570739..159570767,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:159570739..159570767,+ to FFCP PHASE1:Hg19::chr3:159570739..159570767,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003fcv.1_5end | |||
|cluster_id=chr3:159570739..159570767,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_14_at_SCHIP1_5end | |||
|id=chr3:159570739..159570767,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.46e-12!24;CL:0000115!1.38e-10!35;CL:0000222!3.12e-09!119;CL:0000071!1.62e-08!18;CL:0002546!1.62e-08!18;CL:0002078!6.11e-08!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.02e-14;24!CL:0000115;2.30e-12;36!CL:0002138;3.65e-10;6!CL:0002144;9.40e-09;3!CL:0002618;2.80e-08;3!CL:0002078;3.11e-08;45!CL:0002188;5.63e-08;5!CL:0000071;8.98e-08;18!CL:0002543;7.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.30e-16,36;CL:0002139,6.85e-15,24;CL:0002078,8.70e-12,45;CL:0005020,2.35e-10,6;CL:0002138,2.35e-10,6;CL:0005022,2.35e-10,6;CL:0002144,1.21e-08,3;CL:0002618,2.03e-08,3;CL:0000213,3.10e-08,58;CL:0000215,3.10e-08,58;CL:0002188,5.88e-08,5;CL:0000071,8.12e-08,18;CL:0002546,8.12e-08,18;CL:0002543,5.53e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;3.65e-10;6!CL:0002546;8.98e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1287;8.26e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1287,9.41e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002049!6.80e-12!79;UBERON:0007798!6.80e-12!79;UBERON:0000055!1.74e-11!69;UBERON:0001009!1.70e-10!113;UBERON:0004872!3.45e-09!84;UBERON:0004535!3.77e-09!110;UBERON:0001986!1.62e-08!18;UBERON:0004638!1.62e-08!18;UBERON:0004852!1.62e-08!18;UBERON:0000119!2.41e-08!312;UBERON:0000483!1.20e-07!309;UBERON:0001981!1.86e-07!60;UBERON:0007500!1.86e-07!60;UBERON:0004537!1.86e-07!60;UBERON:0006965!1.86e-07!60;UBERON:0001473!8.85e-07!8;UBERON:0004536!8.85e-07!8;UBERON:0006558!8.85e-07!8;UBERON:0007023!9.83e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.62e-10;8!UBERON:0004536;1.62e-10;8!UBERON:0006558;1.62e-10;8!UBERON:0010523;9.40e-09;3!UBERON:0001915;9.40e-09;3!UBERON:0001982;9.40e-09;3!UBERON:0002465;2.85e-08;10!UBERON:0004638;8.98e-08;18!UBERON:0001986;8.98e-08;18!UBERON:0004852;8.98e-08;18!UBERON:0005090;5.61e-07;2!UBERON:0001630;5.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.01e-10,8;UBERON:0004536,1.01e-10,8;UBERON:0006558,1.01e-10,8;UBERON:0010523,1.21e-08,3;UBERON:0001915,1.21e-08,3;UBERON:0001982,1.21e-08,3;UBERON:0002465,1.96e-08,10;UBERON:0004638,8.12e-08,18;UBERON:0001986,8.12e-08,18;UBERON:0004852,8.12e-08,18;UBERON:0003103,3.90e-07,68;UBERON:0001009,4.14e-07,112;UBERON:0005090,5.63e-07,2;UBERON:0001630,5.63e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0.74259811776028,0.662794751455832,0,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,2.64240395401362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0.144846518960824,0,0,0,0,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,1.37559020970034,0,2.32575083252396,1.42306505074684,2.00832367658802,2.01414658554573,2.28081631715554,3.1728067481262,0.735326160691737,0.81014194788176,1.69669483739752,2.02076435363553,2.70267553159973,0,0.949265659568129,1.46561395144326,0,0,0,0.496971951695318,0.25326102332916,0.926864265692532,0.286836620748814,0.709336764396714,0,0,0.49333509683432,0.622422070799533,0.942974704487816,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,1.17434498643765,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0.910161361938026,1.43723628363248,0.168336113954066,0.125118519871964,0,0,0,0,0.340296549480063,0.358779271377724,0.427114777637135,0,0,0.309157587715317,0,0,0,0,0,0.368199594569197,0.484938170456436,0.355009592516614,0.302256294682921,0,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0,0.185176890317059,0.325808305310325,0,0,0,0.587043471179108,1.58803092537181,1.85194205030644,0.570762456703795,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0.766765358330422,0,0.088048434013226,0.621984346622316,2.16179930125442,2.27236380167484,0.063497894292169,0,0,0,0.102827492703324,0,0,0.897048674762886,0.43596006883328,0.8800594298514,0.387815147273333,0,0,0,0,0,1.41849132023278,0,0.428933980974443,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,2.15662369942424,0,1.42636905040718,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.10422342547226,0.500170521059677,0.271265023699736,1.03985430765404,0,0.473107245101804,1.05427273493442,0.300946099727719,2.27407504055985,0,0,0.737476674166813,0.695068915744663,0.587403472388222,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.655622074797121,0,0.15403067420883,0,0,0.211103257785751,1.13733384070897,1.19065593693561,2.59099099322567,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0.976135183992909,0.206082023295445,0.27470839445503,0.41254749960294,0.574265537996172,0,0,0.193341436584244,0.154048617114644,0.614014698904518,0.689182862422653,1.07420244868274,0.870100163485371,0.426133137080504,0.267096106940212,0.165284915360978,0.384380134730212,0.893288987462089,0,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0,0.18532421910392,0.286249773483982,1.86079184679834,1.2655176988749,0.571890581771475,0.511795582622668,2.56763392820352,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,3.9353685122798,0.202910376962704,0,0,0.143411352204052,0.589494246078727,0.35667105148125,0.709522128141196,0.211107635297664,0,0,0.349934720244983,0,0.670302275535787,0,0.376575203107117,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0,1.48642540100575,0,0,0,0,0,7.4085753953359,0,0,0.456469358066384,0,7.51903431270201,0,0,0,3.40676990152261,0,0,0,0.333698283423817,1.17232857241224,0,0,0,0,0,0,0.586032717087576,0,0.111443384277478,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0.311039587661807,0,0,0,0.394573622547734,0,2.22273980289274,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.461701551022782,0,0,0.179515288819544,0,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.202203398942031,8.02577647298789,0.468528891450678,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,1.37588825977293,0,0,0,0.581934098930517,0,2.25980740780532,0.822251547880505,0,0.569797163602908,0,0,0.640358984218058,0,0,0,0,0,0,0,0.271808412147228,0.523014231561666,0.305994652908965,0,0.600420288709789,0,0,0,0,5.58564802544508,5.27068975226872,0,2.1964690054889,3.004582336956,11.1585728720936,11.6227407402036,1.44119953416961,0,0,0,0,0,5.75778658047334,0,0.408610218334727,0,0,0.415440338029185,0,0,0.364497339948148,0,0.0788057072991982,1.04909176269996,0.105600336519406,0,0,4.2881719582402,11.2555634962123,0,0,1.72844298240254,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0.704815022316672,0.2135748251353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| 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| ||
|short_description=p14@SCHIP1 | |||
}} | }} |
Latest revision as of 09:46, 16 September 2015
Short description: | p14@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SCHIP1_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_uc003fcv.1_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.30e-16 | 36 |
endothelial cell of vascular tree | 6.85e-15 | 24 |
meso-epithelial cell | 8.70e-12 | 45 |
lymphangioblast | 2.35e-10 | 6 |
endothelial cell of lymphatic vessel | 2.35e-10 | 6 |
vascular lymphangioblast | 2.35e-10 | 6 |
capillary endothelial cell | 1.21e-08 | 3 |
endothelial cell of umbilical vein | 2.03e-08 | 3 |
lining cell | 3.10e-08 | 58 |
barrier cell | 3.10e-08 | 58 |
glomerular endothelial cell | 5.88e-08 | 5 |
blood vessel endothelial cell | 8.12e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.12e-08 | 18 |
vein endothelial cell | 5.53e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.01e-10 | 8 |
lymph vasculature | 1.01e-10 | 8 |
lymphatic part of lymphoid system | 1.01e-10 | 8 |
microcirculatory vessel | 1.21e-08 | 3 |
endothelium of capillary | 1.21e-08 | 3 |
capillary | 1.21e-08 | 3 |
lymphoid system | 1.96e-08 | 10 |
blood vessel endothelium | 8.12e-08 | 18 |
endothelium | 8.12e-08 | 18 |
cardiovascular system endothelium | 8.12e-08 | 18 |
compound organ | 3.90e-07 | 68 |
circulatory system | 4.14e-07 | 112 |
muscle structure | 5.63e-07 | 2 |
muscle organ | 5.63e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system disease | 9.41e-07 | 4 |