FFCP PHASE1:Hg19::chr3:147088169..147088187,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:147088169..147088187,- to FFCP PHASE1:Hg19::chr3:147088169..147088187,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:147088169..147088187,- | |||
|coexpression_cluster_id=C1079 | |||
|description=CAGE_peak_at_chr3:147088169..147088187,- | |||
|id=chr3:147088169..147088187,- | |||
|ontology_enrichment_celltype=CL:0000708!4.54e-12!3;CL:0002603!4.71e-12!3;CL:0000128!1.12e-08!7;CL:0000126!1.12e-08!7;CL:0000127!1.12e-08!7;CL:0002453!1.12e-08!7;CL:0002549!1.73e-08!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.93e-44;3!UBERON:0006241;1.43e-42;3!UBERON:0003057;1.43e-42;3!UBERON:0010115;2.06e-15;1!UBERON:0005425;2.06e-15;1!UBERON:0006601;3.10e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.28e-88!57;UBERON:0005068!2.28e-88!57;UBERON:0006241!2.28e-88!57;UBERON:0007135!2.28e-88!57;UBERON:0002616!8.12e-85!59;UBERON:0001017!3.07e-80!82;UBERON:0005743!1.05e-79!86;UBERON:0000073!2.00e-78!94;UBERON:0001016!2.00e-78!94;UBERON:0000955!3.43e-74!69;UBERON:0006238!3.43e-74!69;UBERON:0003075!7.15e-66!86;UBERON:0007284!7.15e-66!86;UBERON:0002346!1.50e-62!90;UBERON:0003076!1.00e-54!15;UBERON:0003057!1.00e-54!15;UBERON:0004732!2.27e-47!13;UBERON:0004733!1.15e-43!12;UBERON:0002028!1.15e-43!12;UBERON:0007277!1.15e-43!12;UBERON:0002780!2.05e-43!41;UBERON:0001890!2.05e-43!41;UBERON:0006240!2.05e-43!41;UBERON:0000033!1.46e-42!123;UBERON:0003080!2.91e-42!42;UBERON:0000153!3.63e-40!129;UBERON:0007811!3.63e-40!129;UBERON:0004121!1.04e-39!169;UBERON:0000924!1.43e-38!173;UBERON:0006601!1.43e-38!173;UBERON:0007023!1.37e-37!115;UBERON:0002680!4.35e-33!9;UBERON:0001895!4.35e-33!9;UBERON:0010092!4.35e-33!9;UBERON:0002020!6.68e-32!34;UBERON:0003528!6.68e-32!34;UBERON:0001893!8.07e-32!34;UBERON:0003056!6.14e-30!61;UBERON:0001950!7.24e-30!20;UBERON:0002791!2.13e-29!33;UBERON:0000956!4.39e-27!25;UBERON:0000203!4.39e-27!25;UBERON:0002619!5.47e-27!22;UBERON:0001869!8.76e-27!32;UBERON:0002037!2.23e-23!6;UBERON:0006215!2.23e-23!6;UBERON:0002298!7.39e-22!8;UBERON:0000025!3.99e-21!194;UBERON:0000119!3.24e-17!312;UBERON:0000477!2.47e-16!286;UBERON:0001871!2.40e-15!7;UBERON:0004111!3.26e-15!241;UBERON:0000200!1.68e-14!6;UBERON:0000483!2.27e-14!309;UBERON:0001894!1.05e-13!7;UBERON:0006222!1.05e-13!7;UBERON:0002240!1.07e-12!3;UBERON:0001896!2.88e-12!3;UBERON:0005290!2.88e-12!3;UBERON:0010096!2.88e-12!3;UBERON:0003210!4.54e-12!3;UBERON:0001872!7.34e-12!5;UBERON:0006331!1.54e-11!3;UBERON:0000988!1.85e-11!3;UBERON:0000475!2.83e-11!365;UBERON:0002771!4.25e-11!3;UBERON:0000064!4.44e-11!219;UBERON:0002360!6.43e-09!2;UBERON:0000094!6.43e-09!2;UBERON:0007645!6.43e-09!2;UBERON:0005162!7.50e-09!2;UBERON:0000122!7.50e-09!2;UBERON:0001897!8.42e-09!2;UBERON:0003947!1.73e-08!2;UBERON:0005629!1.73e-08!2;UBERON:0005358!1.73e-08!2;UBERON:0001886!1.73e-08!2;UBERON:0004086!1.73e-08!2;UBERON:0005282!1.73e-08!2;UBERON:0005281!1.73e-08!2;UBERON:0002148!2.25e-08!2;UBERON:0009662!2.25e-08!2;UBERON:0000062!3.40e-08!511;UBERON:0005174!9.04e-08!5;UBERON:0001137!9.04e-08!5;UBERON:0005284!1.69e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.43e-42;3!UBERON:0005174;1.43e-42;3!UBERON:0001137;1.43e-42;3!UBERON:0004732;3.14e-39;13!UBERON:0004733;7.11e-30;12!UBERON:0002028;7.11e-30;12!UBERON:0002037;2.45e-22;6!UBERON:0001896;6.50e-20;3!UBERON:0005290;6.50e-20;3!UBERON:0002363;2.06e-15;1!UBERON:0000941;2.06e-15;1!UBERON:0001785;2.06e-15;1!UBERON:0002464;2.06e-15;1!UBERON:0004904;2.06e-15;1!UBERON:0001021;2.06e-15;1!UBERON:0002680;4.06e-15;9!UBERON:0001895;4.06e-15;9!UBERON:0003296;4.88e-15;4!UBERON:0010133;4.88e-15;4!UBERON:0001016;9.27e-13;83!UBERON:0002298;1.90e-10;6!UBERON:0000073;2.92e-09;53!UBERON:0002616;2.92e-09;53!UBERON:0001894;5.37e-09;7!UBERON:0001017;5.43e-09;75!UBERON:0001905;2.31e-08;2!UBERON:0000007;2.31e-08;2!UBERON:0002360;2.31e-08;2!UBERON:0003714;2.31e-08;2!UBERON:0005162;2.31e-08;2!UBERON:0000122;2.31e-08;2!UBERON:0002757;2.31e-08;2!UBERON:0010134;2.31e-08;2!UBERON:0000094;2.31e-08;2!UBERON:0005408;2.31e-08;2!UBERON:0001899;2.31e-08;2!UBERON:0010743;2.31e-08;2!UBERON:0000955;5.87e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.40e-59,15;UBERON:0003057,1.40e-59,15;UBERON:0002240,1.91e-42,3;UBERON:0005174,1.91e-42,3;UBERON:0001137,1.91e-42,3;UBERON:0004732,3.36e-39,13;UBERON:0004733,8.03e-30,12;UBERON:0002028,8.03e-30,12;UBERON:0007277,8.03e-30,12;UBERON:0001016,1.03e-24,89;UBERON:0001049,8.60e-24,56;UBERON:0005068,8.60e-24,56;UBERON:0006241,8.60e-24,56;UBERON:0007135,8.60e-24,56;UBERON:0001017,2.46e-23,81;UBERON:0002037,2.45e-22,6;UBERON:0006215,2.45e-22,6;UBERON:0001896,7.88e-20,3;UBERON:0005290,7.88e-20,3;UBERON:0010096,7.88e-20,3;UBERON:0003075,1.73e-19,82;UBERON:0007284,1.73e-19,82;UBERON:0002346,1.53e-18,86;UBERON:0002363,1.54e-15,1;UBERON:0007645,1.54e-15,1;UBERON:0007647,1.54e-15,1;UBERON:0010115,1.54e-15,1;UBERON:0000941,1.78e-15,1;UBERON:0001785,1.78e-15,1;UBERON:0002464,1.78e-15,1;UBERON:0004904,1.78e-15,1;UBERON:0001021,1.78e-15,1;UBERON:0003902,1.78e-15,1;UBERON:0005425,1.78e-15,1;UBERON:0010371,3.58e-15,104;UBERON:0002680,4.06e-15,9;UBERON:0001895,4.06e-15,9;UBERON:0010092,4.06e-15,9;UBERON:0003296,6.04e-15,4;UBERON:0010133,6.04e-15,4;UBERON:0010314,4.25e-14,132;UBERON:0007023,6.66e-14,114;UBERON:0004121,1.81e-12,171;UBERON:0000924,1.81e-12,171;UBERON:0006601,1.81e-12,171;UBERON:0000073,1.97e-12,53;UBERON:0002616,1.97e-12,53;UBERON:0000955,2.51e-12,68;UBERON:0006238,2.51e-12,68;UBERON:0002298,2.09e-10,6;UBERON:0011216,3.13e-09,223;UBERON:0001894,6.06e-09,7;UBERON:0006222,6.06e-09,7;UBERON:0002360,2.00e-08,2;UBERON:0000094,2.00e-08,2;UBERON:0010743,2.00e-08,2;UBERON:0003714,2.15e-08,2;UBERON:0005162,2.15e-08,2;UBERON:0000122,2.15e-08,2;UBERON:0001905,2.31e-08,2;UBERON:0002757,2.31e-08,2;UBERON:0010134,2.31e-08,2;UBERON:0005408,2.31e-08,2;UBERON:0001899,2.31e-08,2;UBERON:0000007,2.87e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.80672114403045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86079184679834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,5.63954225649246,3.25102380848902,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.234264445725339,0,0,0,0,0,0.61214552326098,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,2.29363678276028,1.22021956690538,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0,0,0.138314504928436,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.126831620387814,0.546974809018219,0,0,0,0,0,1.3451348888753,1.21393120847326,0,0,0,0,0.135939465953663,0.328863867814245,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0,0,0,0,0,0,0,0,1.57046773691956,1.18818560130834,1.2679671827502,0,0,0,0,0,0,0,0,0,0.143339583151451,11.6750956022957,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.80672114403045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86079184679834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,5.63954225649246,3.25102380848902,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.234264445725339,0,0,0,0,0,0.61214552326098,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,2.29363678276028,1.22021956690538,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0,0,0.138314504928436,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.126831620387814,0.546974809018219,0,0,0,0,0,1.3451348888753,1.21393120847326,0,0,0,0,0.135939465953663,0.328863867814245,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0,0,0,0,0,0,0,0,1.57046773691956,1.18818560130834,1.2679671827502,0,0,0,0,0,0,0,0,0,0.143339583151451,11.6750956022957,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:147088169..147088187,- | |||
}} | }} |
Latest revision as of 16:41, 29 July 2015
Short description: | p@chr3:147088169..147088187, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:147088169..147088187, - |
Coexpression cluster: | C1079_synovial_cerebellum_small_Smooth_medulla_spinal_dura |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data