FFCP PHASE1:Hg19::chr3:141105820..141105861,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:141105820..141105861,+ to FFCP PHASE1:Hg19::chr3:141105820..141105861,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:141105820..141105861,+ | |||
|coexpression_cluster_id=C3619 | |||
|description=CAGE_peak_at_chr3:141105820..141105861,+ | |||
|id=chr3:141105820..141105861,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000569;7.18e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,5.34e-10,4;CL:0000011,5.34e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.63e-17;82!CL:0000011;7.18e-10;4!UBERON:0006215;1.13e-09;3!UBERON:0006241;3.88e-08;3!UBERON:0003057;3.88e-08;3!UBERON:0010122;4.54e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.93e-39!57;UBERON:0005068!6.93e-39!57;UBERON:0006241!6.93e-39!57;UBERON:0007135!6.93e-39!57;UBERON:0002780!4.13e-32!41;UBERON:0001890!4.13e-32!41;UBERON:0006240!4.13e-32!41;UBERON:0002616!1.99e-31!59;UBERON:0000073!2.94e-31!94;UBERON:0001016!2.94e-31!94;UBERON:0003080!5.84e-31!42;UBERON:0001017!3.42e-30!82;UBERON:0005743!7.60e-29!86;UBERON:0000955!6.67e-28!69;UBERON:0006238!6.67e-28!69;UBERON:0002020!3.35e-26!34;UBERON:0003528!3.35e-26!34;UBERON:0001893!4.98e-26!34;UBERON:0001869!3.86e-25!32;UBERON:0002791!4.68e-25!33;UBERON:0003075!9.48e-24!86;UBERON:0007284!9.48e-24!86;UBERON:0002346!1.59e-23!90;UBERON:0002619!5.55e-22!22;UBERON:0007023!3.83e-21!115;UBERON:0001950!5.07e-20!20;UBERON:0003056!2.60e-18!61;UBERON:0000956!2.66e-18!25;UBERON:0000203!2.66e-18!25;UBERON:0000025!4.92e-17!194;UBERON:0000924!1.58e-15!173;UBERON:0006601!1.58e-15!173;UBERON:0004121!2.23e-15!169;UBERON:0000033!5.51e-15!123;UBERON:0004111!1.91e-14!241;UBERON:0000153!5.53e-14!129;UBERON:0007811!5.53e-14!129;UBERON:0000483!1.72e-11!309;UBERON:0000119!4.51e-11!312;UBERON:0000477!4.83e-11!286;UBERON:0002420!1.25e-09!9;UBERON:0007245!1.25e-09!9;UBERON:0010009!1.25e-09!9;UBERON:0010011!1.25e-09!9;UBERON:0000454!1.25e-09!9;UBERON:0002308!1.92e-09!9;UBERON:0000125!1.92e-09!9;UBERON:0003076!4.92e-09!15;UBERON:0003057!4.92e-09!15;UBERON:0000481!6.92e-09!347;UBERON:0000200!1.09e-07!6;UBERON:0009663!1.12e-07!7;UBERON:0000475!1.52e-07!365;UBERON:0001894!1.71e-07!7;UBERON:0006222!1.71e-07!7;UBERON:0000064!2.02e-07!219;UBERON:0001871!3.81e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.11e-58;32!UBERON:0003528;1.30e-56;34!UBERON:0002020;1.30e-56;34!UBERON:0002619;3.68e-55;22!UBERON:0002791;5.93e-55;32!UBERON:0001893;4.11e-53;34!UBERON:0002780;2.62e-52;41!UBERON:0001890;2.62e-52;41!UBERON:0001950;4.46e-50;20!UBERON:0000073;6.07e-50;53!UBERON:0002616;6.07e-50;53!UBERON:0000956;5.05e-48;25!UBERON:0000203;5.05e-48;25!UBERON:0000955;3.22e-36;68!UBERON:0001017;4.51e-35;75!UBERON:0001016;6.54e-29;83!UBERON:0002420;2.57e-19;9!UBERON:0007245;2.57e-19;9!UBERON:0010009;2.57e-19;9!UBERON:0010011;2.57e-19;9!UBERON:0000454;2.57e-19;9!UBERON:0000125;7.43e-19;9!UBERON:0002308;7.43e-19;9!UBERON:0000200;2.77e-17;6!UBERON:0004733;1.09e-16;12!UBERON:0002028;1.09e-16;12!UBERON:0004732;2.91e-15;13!UBERON:0002298;5.91e-15;6!UBERON:0001872;1.57e-14;5!UBERON:0002021;1.99e-14;5!UBERON:0009663;2.23e-14;7!UBERON:0001871;3.04e-14;6!UBERON:0000349;3.07e-14;5!UBERON:0007023;1.57e-13;114!UBERON:0001894;7.76e-13;7!UBERON:0000369;2.52e-12;4!UBERON:0002435;2.52e-12;4!UBERON:0000204;2.52e-12;4!UBERON:0011216;1.22e-11;132!UBERON:0002680;9.64e-11;9!UBERON:0001895;9.64e-11;9!UBERON:0010314;2.78e-10;132!UBERON:0005383;8.62e-10;3!UBERON:0005382;8.62e-10;3!UBERON:0001870;1.53e-09;3!UBERON:0000988;1.45e-08;3!UBERON:0002240;3.88e-08;3!UBERON:0005174;3.88e-08;3!UBERON:0001137;3.88e-08;3!UBERON:0001896;4.46e-08;3!UBERON:0005290;4.46e-08;3!UBERON:0001873;4.54e-07;2!UBERON:0002702;4.88e-07;2!UBERON:0002771;5.24e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.19e-96,56;UBERON:0005068,1.19e-96,56;UBERON:0006241,1.19e-96,56;UBERON:0007135,1.19e-96,56;UBERON:0000073,1.07e-89,53;UBERON:0002616,1.07e-89,53;UBERON:0001017,7.86e-78,81;UBERON:0000955,8.91e-77,68;UBERON:0006238,8.91e-77,68;UBERON:0002780,1.58e-73,41;UBERON:0001890,1.58e-73,41;UBERON:0003080,1.58e-73,41;UBERON:0006240,1.58e-73,41;UBERON:0001016,1.36e-71,89;UBERON:0001869,5.99e-66,32;UBERON:0003528,6.94e-66,34;UBERON:0002020,6.94e-66,34;UBERON:0003075,4.00e-65,82;UBERON:0007284,4.00e-65,82;UBERON:0001893,1.13e-61,34;UBERON:0002346,1.61e-61,86;UBERON:0002791,3.21e-61,32;UBERON:0002619,3.61e-55,22;UBERON:0001950,4.44e-50,20;UBERON:0010371,1.06e-48,104;UBERON:0000956,4.97e-48,25;UBERON:0000203,4.97e-48,25;UBERON:0010314,6.20e-47,132;UBERON:0003056,1.89e-46,61;UBERON:0007023,2.00e-43,114;UBERON:0004121,1.18e-35,171;UBERON:0000924,1.18e-35,171;UBERON:0006601,1.18e-35,171;UBERON:0000025,6.94e-32,192;UBERON:0011216,4.57e-29,223;UBERON:0004111,1.07e-23,240;UBERON:0003076,5.80e-23,15;UBERON:0003057,5.80e-23,15;UBERON:0002420,2.52e-19,9;UBERON:0007245,2.52e-19,9;UBERON:0010009,2.52e-19,9;UBERON:0010011,2.52e-19,9;UBERON:0000454,2.52e-19,9;UBERON:0000125,7.02e-19,9;UBERON:0002308,7.02e-19,9;UBERON:0000200,2.73e-17,6;UBERON:0000483,3.23e-17,306;UBERON:0000119,6.58e-17,309;UBERON:0004733,1.06e-16,12;UBERON:0002028,1.06e-16,12;UBERON:0007277,1.06e-16,12;UBERON:0004732,2.84e-15,13;UBERON:0002298,5.41e-15,6;UBERON:0001872,1.56e-14,5;UBERON:0002021,1.83e-14,5;UBERON:0009663,2.15e-14,7;UBERON:0000349,3.08e-14,5;UBERON:0001871,3.26e-14,6;UBERON:0001894,7.28e-13,7;UBERON:0006222,7.28e-13,7;UBERON:0000369,2.56e-12,4;UBERON:0002435,2.56e-12,4;UBERON:0000204,2.56e-12,4;UBERON:0010082,2.56e-12,4;UBERON:0002680,9.48e-11,9;UBERON:0001895,9.48e-11,9;UBERON:0010092,9.48e-11,9;UBERON:0005383,8.75e-10,3;UBERON:0005382,8.75e-10,3;UBERON:0001870,1.67e-09,3;UBERON:0000988,1.34e-08,3;UBERON:0002240,3.17e-08,3;UBERON:0005174,3.17e-08,3;UBERON:0001137,3.17e-08,3;UBERON:0000923,4.07e-08,560;UBERON:0010316,4.07e-08,560;UBERON:0005291,4.07e-08,560;UBERON:0006598,4.07e-08,560;UBERON:0010317,4.07e-08,560;UBERON:0002532,4.07e-08,560;UBERON:0001896,4.41e-08,3;UBERON:0005290,4.41e-08,3;UBERON:0010096,4.41e-08,3;UBERON:0002050,6.06e-08,564;UBERON:0005423,3.08e-07,581;UBERON:0001873,4.61e-07,2;UBERON:0010122,4.61e-07,2;UBERON:0002702,4.89e-07,2;UBERON:0002771,5.32e-07,2;UBERON:0000922,8.37e-07,592 | |||
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| ||
|short_description=p@chr3:141105820..141105861,+ | |||
}} | }} |
Latest revision as of 16:25, 29 July 2015
Short description: | p@chr3:141105820..141105861, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:141105820..141105861, + |
Coexpression cluster: | C3619_cerebellum_occipital_caudate_putamen_Fibroblast_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 5.34e-10 | 4 |
migratory trunk neural crest cell | 5.34e-10 | 4 |