FFCP PHASE1:Hg19::chr3:115528904..115528924,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr3:115528904..115528924,- to FFCP PHASE1:Hg19::chr3:115528904..115528924,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4045 | |EntrezGene=4045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6705 | |HGNC=6705 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-445bp_to_AK094535_5end | |||
|cluster_id=chr3:115528904..115528924,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_5_at_LSAMP_5end | |||
|id=chr3:115528904..115528924,- | |||
|ontology_enrichment_celltype=CL:0000135!8.25e-07!3;CL:0000386!8.25e-07!3;CL:0000388!8.25e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.60e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;7.60e-07;2!DOID:4236;7.60e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,9.54e-07,2;DOID:4236,9.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.02e-61!57;UBERON:0005068!2.02e-61!57;UBERON:0006241!2.02e-61!57;UBERON:0007135!2.02e-61!57;UBERON:0001017!2.29e-51!82;UBERON:0002780!1.38e-50!41;UBERON:0001890!1.38e-50!41;UBERON:0006240!1.38e-50!41;UBERON:0005743!2.06e-50!86;UBERON:0002616!7.13e-50!59;UBERON:0003080!3.78e-49!42;UBERON:0002346!2.85e-47!90;UBERON:0003075!5.26e-46!86;UBERON:0007284!5.26e-46!86;UBERON:0000073!2.96e-44!94;UBERON:0001016!2.96e-44!94;UBERON:0000955!1.84e-42!69;UBERON:0006238!1.84e-42!69;UBERON:0002020!1.22e-41!34;UBERON:0003528!1.22e-41!34;UBERON:0001893!4.46e-41!34;UBERON:0002791!1.87e-39!33;UBERON:0003056!7.24e-39!61;UBERON:0001869!9.45e-38!32;UBERON:0002619!2.89e-30!22;UBERON:0001950!5.69e-30!20;UBERON:0000956!8.81e-29!25;UBERON:0000203!8.81e-29!25;UBERON:0007023!1.13e-27!115;UBERON:0000033!1.54e-24!123;UBERON:0000153!8.88e-23!129;UBERON:0007811!8.88e-23!129;UBERON:0000924!1.91e-22!173;UBERON:0006601!1.91e-22!173;UBERON:0004121!3.02e-21!169;UBERON:0002420!1.79e-14!9;UBERON:0007245!1.79e-14!9;UBERON:0010009!1.79e-14!9;UBERON:0010011!1.79e-14!9;UBERON:0000454!1.79e-14!9;UBERON:0002308!2.56e-14!9;UBERON:0000125!2.56e-14!9;UBERON:0000025!3.29e-14!194;UBERON:0001871!2.54e-13!7;UBERON:0003076!4.14e-13!15;UBERON:0003057!4.14e-13!15;UBERON:0000200!8.65e-13!6;UBERON:0001894!9.28e-11!7;UBERON:0006222!9.28e-11!7;UBERON:0009663!1.60e-10!7;UBERON:0004111!1.71e-09!241;UBERON:0002298!1.72e-09!8;UBERON:0000369!5.13e-09!4;UBERON:0002435!5.13e-09!4;UBERON:0000204!5.13e-09!4;UBERON:0010082!5.13e-09!4;UBERON:0000477!1.61e-08!286;UBERON:0004733!3.37e-08!12;UBERON:0002028!3.37e-08!12;UBERON:0007277!3.37e-08!12;UBERON:0000064!6.26e-08!219;UBERON:0002771!7.43e-08!3;UBERON:0002240!1.30e-07!3;UBERON:0000349!1.74e-07!5;UBERON:0000988!1.76e-07!3;UBERON:0004732!1.81e-07!13;UBERON:0002021!1.86e-07!5;UBERON:0005383!2.41e-07!3;UBERON:0005382!2.41e-07!3;UBERON:0006331!2.68e-07!3;UBERON:0001872!3.34e-07!5;UBERON:0005174!3.68e-07!5;UBERON:0001137!3.68e-07!5;UBERON:0000483!7.59e-07!309;UBERON:0000043!8.25e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.50e-56;22!UBERON:0001950;2.85e-51;20!UBERON:0000956;7.04e-50;25!UBERON:0000203;7.04e-50;25!UBERON:0002791;9.17e-42;32!UBERON:0003528;2.89e-40;34!UBERON:0002020;2.89e-40;34!UBERON:0001869;4.87e-40;32!UBERON:0001893;4.47e-36;34!UBERON:0001871;9.22e-26;6!UBERON:0002780;7.00e-25;41!UBERON:0001890;7.00e-25;41!UBERON:0002771;1.58e-23;2!UBERON:0000073;4.71e-22;53!UBERON:0002616;4.71e-22;53!UBERON:0002021;1.62e-20;5!UBERON:0000200;2.00e-17;6!UBERON:0001017;7.82e-15;75!UBERON:0001874;1.96e-12;1!UBERON:0003112;1.96e-12;1!UBERON:0011158;1.96e-12;1!UBERON:0003128;1.96e-12;1!UBERON:0001703;1.96e-12;1!UBERON:0002241;1.96e-12;1!UBERON:0001016;2.12e-12;83!UBERON:0000955;6.81e-12;68!UBERON:0001872;8.11e-10;5!UBERON:0000349;8.11e-10;5!UBERON:0002298;2.51e-08;6!UBERON:0011216;9.35e-08;132!UBERON:0001876;7.60e-07;2!UBERON:0001954;7.60e-07;2!UBERON:0002148;7.60e-07;2!UBERON:0002702;7.60e-07;2!UBERON:0006331;7.60e-07;2!UBERON:0009662;7.60e-07;2!UBERON:0003022;7.60e-07;2!UBERON:0002421;7.60e-07;2!UBERON:0002600;7.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.40e-57,22;UBERON:0001950,1.17e-51,20;UBERON:0003528,1.26e-51,34;UBERON:0002020,1.26e-51,34;UBERON:0000956,4.66e-50,25;UBERON:0000203,4.66e-50,25;UBERON:0002791,1.53e-46,32;UBERON:0001869,1.53e-46,32;UBERON:0001893,8.47e-44,34;UBERON:0001049,1.31e-41,56;UBERON:0005068,1.31e-41,56;UBERON:0006241,1.31e-41,56;UBERON:0007135,1.31e-41,56;UBERON:0000073,3.36e-38,53;UBERON:0002616,3.36e-38,53;UBERON:0002780,2.99e-36,41;UBERON:0001890,2.99e-36,41;UBERON:0003080,2.99e-36,41;UBERON:0006240,2.99e-36,41;UBERON:0001017,5.20e-32,81;UBERON:0000955,4.65e-29,68;UBERON:0006238,4.65e-29,68;UBERON:0001016,1.10e-28,89;UBERON:0003075,5.52e-28,82;UBERON:0007284,5.52e-28,82;UBERON:0002346,1.31e-26,86;UBERON:0001871,7.19e-26,6;UBERON:0003056,4.68e-24,61;UBERON:0002771,1.78e-23,2;UBERON:0010371,1.04e-21,104;UBERON:0002021,5.96e-21,5;UBERON:0010314,3.11e-19,132;UBERON:0000200,2.81e-17,6;UBERON:0004121,3.52e-14,171;UBERON:0000924,3.52e-14,171;UBERON:0006601,3.52e-14,171;UBERON:0003112,1.57e-12,1;UBERON:0011158,1.57e-12,1;UBERON:0003128,1.57e-12,1;UBERON:0001703,1.57e-12,1;UBERON:0002241,1.57e-12,1;UBERON:0004761,1.57e-12,1;UBERON:0009617,1.57e-12,1;UBERON:0007023,2.42e-12,114;UBERON:0001874,4.31e-12,1;UBERON:0011216,6.25e-12,223;UBERON:0000025,7.31e-11,192;UBERON:0001872,7.11e-10,5;UBERON:0000349,8.13e-10,5;UBERON:0002298,2.43e-08,6;UBERON:0004111,2.91e-08,240;UBERON:0003076,3.15e-07,15;UBERON:0003057,3.15e-07,15;UBERON:0001876,4.83e-07,2;UBERON:0002148,5.11e-07,2;UBERON:0006331,5.11e-07,2;UBERON:0009662,5.11e-07,2;UBERON:0005253,6.80e-07,2 | |||
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| ||
|short_description=p5@LSAMP | |||
}} | }} |
Latest revision as of 18:09, 19 September 2015
Short description: | p5@LSAMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LSAMP_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -445bp_to_AK094535_5end |
EntrezGene: | LSAMP |
HGNC: | 6705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 9.54e-07 | 2 |
carcinosarcoma | 9.54e-07 | 2 |