FFCP PHASE1:Hg19::chr3:112360139..112360153,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:112360139..112360153,- to FFCP PHASE1:Hg19::chr3:112360139..112360153,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt=Q76M96 | |UniProt=Q76M96 | ||
|association_with_transcript=0bp_to_ENST00000439685_5end | |||
|cluster_id=chr3:112360139..112360153,- | |||
|description=CAGE_peak_4_at_CCDC80_5end | |||
|id=chr3:112360139..112360153,- | |||
|ontology_enrichment_celltype=CL:0000055!2.38e-21!180;CL:0000680!9.73e-15!57;CL:0000056!9.73e-15!57;CL:0000355!9.73e-15!57;CL:0000187!1.35e-13!54;CL:0000220!4.42e-13!246;CL:0002321!5.25e-13!248;CL:0000393!1.41e-11!60;CL:0000211!1.41e-11!60;CL:0000183!2.33e-11!59;CL:0000192!1.90e-10!42;CL:0000514!1.90e-10!42;CL:0000548!3.22e-09!679;CL:0000004!3.22e-09!679;CL:0000255!3.22e-09!679;CL:0000222!3.73e-09!119;CL:0000057!5.39e-09!75;CL:0000359!6.89e-09!32;CL:0000012!7.63e-09!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.08e-08;32!CL:0000187;2.17e-08;55!CL:0000134;3.34e-08;55!CL:0000192;4.38e-08;43!CL:0000723;1.95e-07;61!CL:0000048;2.88e-07;58!CL:0002620;6.82e-07;23!CL:0000393;9.74e-07;61!CL:0000211;9.74e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.33e-15,58;CL:0000056,1.33e-15,58;CL:0000355,1.33e-15,58;CL:0000187,2.10e-14,55;CL:0002321,5.62e-13,250;CL:0000393,5.62e-12,61;CL:0000211,5.62e-12,61;CL:0000192,4.27e-11,43;CL:0000514,4.27e-11,43;CL:0000222,1.29e-09,121;CL:0000359,3.03e-09,32;CL:0000057,3.75e-08,76;CL:0002620,7.00e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000355;5.65e-09;58!CL:0000514;4.38e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.13e-14!82;UBERON:0004290!2.22e-14!70;UBERON:0001134!5.86e-14!61;UBERON:0002036!5.86e-14!61;UBERON:0003082!5.86e-14!61;UBERON:0002385!8.57e-14!63;UBERON:0001015!8.57e-14!63;UBERON:0000383!8.57e-14!63;UBERON:0000490!1.27e-12!138;UBERON:0000914!3.91e-12!83;UBERON:0002329!3.91e-12!83;UBERON:0003077!3.91e-12!83;UBERON:0003059!3.91e-12!83;UBERON:0007282!3.91e-12!83;UBERON:0009618!3.91e-12!83;UBERON:0007285!3.91e-12!83;UBERON:0002100!5.24e-11!216;UBERON:0004923!5.58e-11!57;UBERON:0004872!5.44e-10!84;UBERON:0005256!1.44e-09!143;UBERON:0003104!5.38e-09!238;UBERON:0009142!5.38e-09!238;UBERON:0000475!1.99e-08!365;UBERON:0002199!3.51e-08!45;UBERON:0002416!3.51e-08!45;UBERON:0000119!3.93e-08!312;UBERON:0000483!4.96e-08!309;UBERON:0005156!5.46e-08!59;UBERON:0000990!5.46e-08!59;UBERON:0002097!1.73e-07!40;UBERON:0001637!5.49e-07!42;UBERON:0003509!5.49e-07!42;UBERON:0004572!5.49e-07!42;UBERON:0001048!5.58e-07!168;UBERON:0003914!8.88e-07!118;UBERON:0003134!8.95e-07!37;UBERON:0000474!8.95e-07!37;UBERON:0003100!9.10e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;9.43e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,4.48e-15,83;UBERON:0002329,9.69e-15,71;UBERON:0003059,9.69e-15,71;UBERON:0007282,9.69e-15,71;UBERON:0004290,9.69e-15,71;UBERON:0009618,9.69e-15,71;UBERON:0001134,2.84e-14,62;UBERON:0002036,2.84e-14,62;UBERON:0003082,2.84e-14,62;UBERON:0007524,3.14e-14,73;UBERON:0003077,3.96e-14,72;UBERON:0007285,3.96e-14,72;UBERON:0000490,6.90e-14,148;UBERON:0002385,7.75e-14,64;UBERON:0001015,7.75e-14,64;UBERON:0000383,7.75e-14,64;UBERON:0005256,1.24e-12,122;UBERON:0003104,2.24e-12,160;UBERON:0009142,2.24e-12,160;UBERON:0007503,2.86e-12,78;UBERON:0002100,5.41e-12,199;UBERON:0004872,3.02e-10,83;UBERON:0002199,5.95e-09,46;UBERON:0002416,5.95e-09,46;UBERON:0005156,2.56e-08,59;UBERON:0000990,2.56e-08,59;UBERON:0002097,3.18e-08,41;UBERON:0004923,6.17e-08,66;UBERON:0001637,3.26e-07,42;UBERON:0003509,3.26e-07,42;UBERON:0004572,3.26e-07,42;UBERON:0003134,3.75e-07,37;UBERON:0000474,3.75e-07,37;UBERON:0003100,3.87e-07,41;UBERON:0003914,4.17e-07,117;UBERON:0000119,4.82e-07,309;UBERON:0000483,6.04e-07,306;UBERON:0001048,7.39e-07,160;UBERON:0000948,8.51e-07,24;UBERON:0005498,8.51e-07,24;UBERON:0004140,8.51e-07,24;UBERON:0009881,8.51e-07,24;UBERON:0004141,8.51e-07,24;UBERON:0003084,8.51e-07,24;UBERON:0007005,8.51e-07,24;UBERON:0004139,8.51e-07,24;UBERON:0004291,8.51e-07,24 | |||
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| ||
|short_description=p4@CCDC80 | |||
}} | }} |
Latest revision as of 14:42, 19 September 2015
Short description: | p4@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC80_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000439685_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | Q76M96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.33e-15 | 58 |
myoblast | 1.33e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-15 | 58 |
muscle cell | 2.10e-14 | 55 |
embryonic cell | 5.62e-13 | 250 |
electrically responsive cell | 5.62e-12 | 61 |
electrically active cell | 5.62e-12 | 61 |
smooth muscle cell | 4.27e-11 | 43 |
smooth muscle myoblast | 4.27e-11 | 43 |
mesodermal cell | 1.29e-09 | 121 |
vascular associated smooth muscle cell | 3.03e-09 | 32 |
fibroblast | 3.75e-08 | 76 |
skin fibroblast | 7.00e-07 | 23 |