FFCP PHASE1:Hg19::chr2:238245005..238245050,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:238245005..238245050,+ to FFCP PHASE1:Hg19::chr2:238245005..238245050,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:238245005..238245050,+ | |||
|coexpression_cluster_id=C4203 | |||
|description=CAGE_peak_at_chr2:238245005..238245050,+ | |||
|id=chr2:238245005..238245050,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.85e-36!180;CL:0000057!2.39e-30!75;CL:0000048!1.03e-16!430;CL:0000723!9.61e-16!436;CL:0000034!1.65e-14!444;CL:0000183!2.53e-14!59;CL:0000680!1.17e-13!57;CL:0000056!1.17e-13!57;CL:0000355!1.17e-13!57;CL:0000187!2.91e-13!54;CL:0002620!1.55e-12!23;CL:0000393!1.29e-10!60;CL:0000211!1.29e-10!60;CL:0002320!5.00e-10!365;CL:0002371!2.02e-09!591;CL:0000134!6.16e-08!358;CL:0000192!8.48e-08!42;CL:0000514!8.48e-08!42;CL:0002334!1.40e-07!12;CL:0000499!1.52e-07!27;CL:0000144!7.96e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000057;1.28e-09;73!CL:0002620;1.78e-09;23!CL:0002334;1.82e-09;12!CL:0000188;7.77e-09;9!CL:0002320;4.59e-08;188!CL:0002570;9.36e-08;8!CL:0000134;1.57e-07;55!CL:0000499;1.61e-07;28!CL:0000723;2.74e-07;61!CL:0000187;6.28e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.51e-26,76;CL:0000048,1.09e-17,427;CL:0000723,5.66e-17,433;CL:0000034,4.70e-16,441;CL:0002320,5.58e-12,361;CL:0000680,1.40e-11,58;CL:0000056,1.40e-11,58;CL:0000355,1.40e-11,58;CL:0000187,7.81e-11,55;CL:0002334,2.00e-09,12;CL:0002620,2.73e-09,23;CL:0000134,3.67e-09,354;CL:0000393,5.25e-09,61;CL:0000211,5.25e-09,61;CL:0000188,8.01e-09,9;CL:0002570,4.40e-08,8;CL:0000499,1.74e-07,28;CL:0000219,3.32e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000355;6.65e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.77e-07;5!DOID:450;5.77e-07;5!DOID:66;5.77e-07;5!DOID:423;5.77e-07;5!DOID:0080000;5.77e-07;5!DOID:11722;5.77e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.50e-07,5;DOID:450,6.50e-07,5;DOID:66,6.50e-07,5;DOID:423,6.50e-07,5;DOID:0080000,6.50e-07,5;DOID:11722,6.50e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.08e-17!83;UBERON:0002329!4.08e-17!83;UBERON:0003077!4.08e-17!83;UBERON:0003059!4.08e-17!83;UBERON:0007282!4.08e-17!83;UBERON:0009618!4.08e-17!83;UBERON:0007285!4.08e-17!83;UBERON:0004290!3.63e-15!70;UBERON:0001134!2.16e-13!61;UBERON:0002036!2.16e-13!61;UBERON:0003082!2.16e-13!61;UBERON:0002385!2.21e-13!63;UBERON:0001015!2.21e-13!63;UBERON:0000383!2.21e-13!63;UBERON:0000486!6.78e-13!82;UBERON:0005256!1.41e-11!143;UBERON:0002384!1.77e-10!375;UBERON:0003102!5.64e-10!95;UBERON:0002199!3.93e-08!45;UBERON:0002416!3.93e-08!45;UBERON:0002100!1.33e-07!216;UBERON:0000948!3.50e-07!24;UBERON:0005498!3.50e-07!24;UBERON:0004140!3.50e-07!24;UBERON:0009881!3.50e-07!24;UBERON:0004141!3.50e-07!24;UBERON:0003084!3.50e-07!24;UBERON:0007005!3.50e-07!24;UBERON:0004139!3.50e-07!24;UBERON:0004291!3.50e-07!24;UBERON:0007100!4.52e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.79e-10;31!UBERON:0001015;4.79e-10;31!UBERON:0000383;4.79e-10;31!UBERON:0004905;2.09e-08;8!UBERON:0000982;2.09e-08;8!UBERON:0004770;2.09e-08;8!UBERON:0002204;2.58e-08;70!UBERON:0002384;4.04e-08;198!UBERON:0001134;1.03e-07;16!UBERON:0002036;1.03e-07;16!UBERON:0011135;2.77e-07;5!UBERON:0002216;2.77e-07;5!UBERON:0011134;2.77e-07;5!UBERON:0002209;2.77e-07;5!UBERON:0002213;2.77e-07;5!UBERON:0007844;2.77e-07;5!UBERON:0011138;2.77e-07;5!UBERON:0001130;2.77e-07;5!UBERON:0001066;2.77e-07;5!UBERON:0001468;2.77e-07;5!UBERON:0002199;8.93e-07;46!UBERON:0002416;8.93e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.01e-13,73;UBERON:0002329,2.95e-13,71;UBERON:0003059,2.95e-13,71;UBERON:0007282,2.95e-13,71;UBERON:0004290,2.95e-13,71;UBERON:0009618,2.95e-13,71;UBERON:0003077,6.29e-13,72;UBERON:0007285,6.29e-13,72;UBERON:0000486,9.65e-12,83;UBERON:0002384,1.64e-11,371;UBERON:0002385,1.93e-11,64;UBERON:0001015,1.93e-11,64;UBERON:0000383,1.93e-11,64;UBERON:0001134,3.23e-11,62;UBERON:0002036,3.23e-11,62;UBERON:0003082,3.23e-11,62;UBERON:0007503,3.76e-11,78;UBERON:0003104,5.16e-10,160;UBERON:0009142,5.16e-10,160;UBERON:0003102,1.71e-09,99;UBERON:0002199,5.13e-09,46;UBERON:0002416,5.13e-09,46;UBERON:0005256,1.17e-08,122;UBERON:0004905,2.38e-08,8;UBERON:0000982,2.38e-08,8;UBERON:0004770,2.38e-08,8;UBERON:0011135,3.03e-07,5;UBERON:0002216,3.03e-07,5;UBERON:0011134,3.03e-07,5;UBERON:0002209,3.03e-07,5;UBERON:0002213,3.03e-07,5;UBERON:0005856,3.03e-07,5;UBERON:0005866,3.03e-07,5;UBERON:0005863,3.03e-07,5;UBERON:0007844,3.03e-07,5;UBERON:0011138,3.03e-07,5;UBERON:0001130,3.03e-07,5;UBERON:0001066,3.03e-07,5;UBERON:0001468,3.03e-07,5;UBERON:0002097,9.01e-07,41 | |||
|phase1_expression=1.81678379270557,4.92431204949261,0.281908808191942,1.0007329835313,2.68176656656373,0.872338524100369,0,1.89515962028049,1.04474251279935,0,0,0,0,2.47532705920093,4.30816588446291,2.6893005858071,0.602694528023977,3.65155045193687,2.92759679274304,0,0.408001382488506,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,2.68280343881454,0.383587685530591,2.89151321907653,1.00267582127178,4.49024208778554,0,1.45990461090791,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.51956613997496,0.926864265692532,3.15520282823695,2.4826786753885,0,1.06748995729705,2.96001058100592,0.311211035399766,1.88594940897563,1.9615428373615,0.756787138224657,2.88087962239999,0.234321431833797,4.05808099879417,0,3.88566569434683,0.939475989150119,1.29498355494505,1.12360645361799,1.63323337003915,4.91337269247072,4.13303124703062,0,5.93440630268536,0,0.718618141816238,0.673344455816265,1.7516592782075,0,1.75591048352335,2.75839016219118,2.70428506031874,0.794025282120147,7.89314397030993,3.63047560991565,2.11931901159562,4.80145753735044,1.33968288009971,2.83404594050192,0.558350568994769,4.38818463827292,1.07180705677318,4.29137416214995,0.736399189138395,0.80823028409406,8.16522062788213,0.10075209822764,0.847802961552438,0,0,0,0,0,0,0,0,0,0,14.7945415784364,0,3.25057549622385,5.77503585335668,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0.325808305310325,5.19967392639789,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.7333828582095,1.16344544182,0,7.607724773004,1.86156681609409,5.2003718455683,0.771622122786426,0,0.266422179016099,2.85955987316295,3.7983512377401,1.64648067356154,2.93162565864362,2.13235169245527,1.58390374586686,0,0,0,0,0,0,1.19812427745791,0,0,1.15825045334063,1.64381058040307,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,2.69921281782108,11.0037514633129,3.25518028439683,3.53550464602372,4.46072471992904,1.57702415033935,1.7571212248907,0.300946099727719,0,4.1389228517002,4.64957918974806,0.921845842708516,1.39013783148933,1.37060810223918,3.0882908142977,0,0,0,0,0,0.604780586659361,1.24053903909388,3.83654933220156,4.2099014164961,0.384417447767103,1.02341449813341,1.76939313257968,0,7.09364591492216,5.50441348470694,1.97105174433142,3.11552657510173,7.08883308605751,0,0,0,2.64073230778596,7.4657378882754,5.50722542829581,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,5.89691381581944,2.00263202249038,3.22357716924872,1.92971201478343,2.68550612170684,6.81578461396874,3.23861184181183,3.56128142586949,0,0,0,0,0.929691098594572,7.24068397710472,0,0.616067160352178,0,0.869932992075073,0,0,2.232950216158,1.2655176988749,1.14378116354295,0,7.70290178461057,0.318203247925937,0,1.61885211824983,2.19629623788844,1.64937363283961,0.202182481573316,0,0.842516912477962,0.48763373908959,0.731140468893853,1.05650146756755,2.32049849393576,12.0194617160656,2.26016233240486,0,0.66343897524122,0,2.31510213706675,8.52663177660623,0,0.30982349809975,0,0,0.982490410131212,0,1.41904425628239,4.22215270595328,5.59801318031833,0.379473173765715,1.39973888097993,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0.398495976502139,0,0,0,0,1.24415835064723,0,0,0,0.197286811273867,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0.0897576444097721,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,2.40773294189637,0,0,0,0.485560759068186,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,2.40780445460263,0,0,0,0.193978032976839,0,0.225980740780532,2.32971271899477,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,2.3459590056354,0.288950589901519,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.134366944973453,3.60299883542404,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,1.62899880526114,0.864221491201268,3.5924609612035,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2937214757744,0,0,1.79105763464249,3.97312626740282,3.88364103051829,2.27283606330107,4.77979013329893,9.7879234375619,0.686520205190771,1.36107831386915,1.70980920641059,1.03498604992744,0.318593534327405,1.34940933649081,0.776314784381297,3.7323558705677,4.51930914748591,2.60872530905867,0,0.761610424337591,0.81374146640932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| ||
|short_description=p@chr2:238245005..238245050,+ | |||
}} | }} |
Latest revision as of 08:10, 29 July 2015
Short description: | p@chr2:238245005..238245050, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238245005..238245050, + |
Coexpression cluster: | C4203_tenocyte_Hair_Nucleus_Smooth_Fibroblast_normal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.51e-26 | 76 |
multi fate stem cell | 1.09e-17 | 427 |
somatic stem cell | 5.66e-17 | 433 |
stem cell | 4.70e-16 | 441 |
connective tissue cell | 5.58e-12 | 361 |
muscle precursor cell | 1.40e-11 | 58 |
myoblast | 1.40e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.40e-11 | 58 |
muscle cell | 7.81e-11 | 55 |
preadipocyte | 2.00e-09 | 12 |
skin fibroblast | 2.73e-09 | 23 |
mesenchymal cell | 3.67e-09 | 354 |
electrically responsive cell | 5.25e-09 | 61 |
electrically active cell | 5.25e-09 | 61 |
cell of skeletal muscle | 8.01e-09 | 9 |
mesenchymal stem cell of adipose | 4.40e-08 | 8 |
stromal cell | 1.74e-07 | 28 |
motile cell | 3.32e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.50e-07 | 5 |
myotonic disease | 6.50e-07 | 5 |
muscle tissue disease | 6.50e-07 | 5 |
myopathy | 6.50e-07 | 5 |
muscular disease | 6.50e-07 | 5 |
myotonic dystrophy | 6.50e-07 | 5 |