FFCP PHASE1:Hg19::chr2:229046447..229046465,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:229046447..229046465,- to FFCP PHASE1:Hg19::chr2:229046447..229046465,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80309 | |EntrezGene=80309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30619 | |HGNC=30619 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M3C7 | |UniProt=Q2M3C7 | ||
|association_with_transcript=-86bp_to_ENST00000392056,NM_001142644,NM_030623,uc002vpp.2,uc002vpq.2,uc010zlx.1_5end | |||
|cluster_id=chr2:229046447..229046465,- | |||
|coexpression_cluster_id=C1503 | |||
|description=CAGE_peak_3_at_SPHKAP_5end | |||
|id=chr2:229046447..229046465,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.36e-17;3!UBERON:0006601;1.18e-07;82!UBERON:0004140;8.34e-07;1!UBERON:0010226;8.80e-07;1 | |||
|ontology_enrichment_disease=DOID:171!9.59e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:114;1.57e-11;2!DOID:171;2.54e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.31e-11,2;DOID:171,2.72e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.52e-53!90;UBERON:0001049!6.63e-52!57;UBERON:0005068!6.63e-52!57;UBERON:0006241!6.63e-52!57;UBERON:0007135!6.63e-52!57;UBERON:0007023!1.50e-48!115;UBERON:0002616!4.87e-47!59;UBERON:0003075!9.59e-47!86;UBERON:0007284!9.59e-47!86;UBERON:0001017!1.36e-46!82;UBERON:0005743!6.04e-46!86;UBERON:0000073!1.89e-44!94;UBERON:0001016!1.89e-44!94;UBERON:0000955!1.20e-42!69;UBERON:0006238!1.20e-42!69;UBERON:0002780!6.22e-40!41;UBERON:0001890!6.22e-40!41;UBERON:0006240!6.22e-40!41;UBERON:0002020!7.77e-40!34;UBERON:0003528!7.77e-40!34;UBERON:0001893!9.17e-40!34;UBERON:0003080!8.66e-39!42;UBERON:0002791!8.32e-38!33;UBERON:0001869!1.73e-36!32;UBERON:0000924!1.89e-34!173;UBERON:0006601!1.89e-34!173;UBERON:0003056!1.08e-31!61;UBERON:0002619!4.76e-31!22;UBERON:0000153!2.24e-30!129;UBERON:0007811!2.24e-30!129;UBERON:0004121!9.56e-30!169;UBERON:0000033!3.07e-28!123;UBERON:0001950!4.90e-27!20;UBERON:0000956!8.21e-27!25;UBERON:0000203!8.21e-27!25;UBERON:0002420!6.75e-15!9;UBERON:0007245!6.75e-15!9;UBERON:0010009!6.75e-15!9;UBERON:0010011!6.75e-15!9;UBERON:0000454!6.75e-15!9;UBERON:0002308!1.24e-14!9;UBERON:0000125!1.24e-14!9;UBERON:0004733!1.59e-14!12;UBERON:0002028!1.59e-14!12;UBERON:0007277!1.59e-14!12;UBERON:0000064!3.32e-14!219;UBERON:0000025!7.69e-14!194;UBERON:0003076!8.77e-14!15;UBERON:0003057!8.77e-14!15;UBERON:0004732!3.00e-13!13;UBERON:0001871!4.95e-13!7;UBERON:0000483!8.40e-13!309;UBERON:0000119!1.58e-12!312;UBERON:0002680!4.36e-12!9;UBERON:0001895!4.36e-12!9;UBERON:0010092!4.36e-12!9;UBERON:0000349!5.50e-12!5;UBERON:0000477!1.38e-11!286;UBERON:0009663!7.81e-11!7;UBERON:0004111!1.02e-10!241;UBERON:0002298!1.46e-09!8;UBERON:0000369!3.71e-09!4;UBERON:0002435!3.71e-09!4;UBERON:0000204!3.71e-09!4;UBERON:0010082!3.71e-09!4;UBERON:0000200!3.79e-09!6;UBERON:0000062!1.67e-08!511;UBERON:0000468!1.70e-08!659;UBERON:0000475!2.95e-08!365;UBERON:0000922!3.26e-08!612;UBERON:0000481!4.86e-08!347;UBERON:0001872!1.58e-07!5;UBERON:0000923!1.71e-07!604;UBERON:0005291!1.71e-07!604;UBERON:0006598!1.71e-07!604;UBERON:0002532!1.71e-07!604;UBERON:0002050!1.90e-07!605;UBERON:0005423!1.90e-07!605;UBERON:0002021!1.98e-07!5;UBERON:0000988!2.46e-07!3;UBERON:0005383!3.19e-07!3;UBERON:0005382!3.19e-07!3;UBERON:0000467!4.24e-07!625;UBERON:0006331!4.32e-07!3;UBERON:0000480!4.69e-07!626;UBERON:0002771!5.01e-07!3;UBERON:0002037!8.67e-07!6;UBERON:0006215!8.67e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.42e-28;22!UBERON:0000956;8.54e-25;25!UBERON:0000203;8.54e-25;25!UBERON:0001869;2.09e-23;32!UBERON:0001950;1.57e-21;20!UBERON:0003528;1.30e-20;34!UBERON:0002020;1.30e-20;34!UBERON:0002791;1.68e-20;32!UBERON:0000073;4.91e-19;53!UBERON:0002616;4.91e-19;53!UBERON:0001893;5.15e-19;34!UBERON:0002780;2.50e-17;41!UBERON:0001890;2.50e-17;41!UBERON:0000349;5.02e-16;5!UBERON:0004733;6.51e-15;12!UBERON:0002028;6.51e-15;12!UBERON:0004732;1.01e-13;13!UBERON:0007100;2.32e-12;25!UBERON:0001016;4.25e-12;83!UBERON:0002346;5.31e-12;4!UBERON:0000923;5.31e-12;4!UBERON:0010316;5.31e-12;4!UBERON:0005291;5.31e-12;4!UBERON:0000955;6.43e-12;68!UBERON:0001954;5.00e-11;2!UBERON:0003022;5.00e-11;2!UBERON:0002421;5.00e-11;2!UBERON:0002600;5.00e-11;2!UBERON:0001876;1.06e-10;2!UBERON:0001017;4.31e-10;75!UBERON:0002050;1.07e-09;5!UBERON:0005423;1.07e-09;5!UBERON:0002680;1.36e-09;9!UBERON:0001895;1.36e-09;9!UBERON:0001872;1.65e-09;5!UBERON:0002037;1.01e-08;6!UBERON:0007023;1.72e-08;114!UBERON:0004151;4.19e-08;3!UBERON:0003978;5.53e-08;3!UBERON:0000946;5.53e-08;3!UBERON:0002298;7.69e-08;6!UBERON:0001896;2.05e-07;3!UBERON:0005290;2.05e-07;3!UBERON:0000922;4.55e-07;49!UBERON:0002084;8.80e-07;1!UBERON:0002082;8.80e-07;1!UBERON:0001871;8.80e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.33e-32,53;UBERON:0002616,2.33e-32,53;UBERON:0002346,2.00e-30,86;UBERON:0001049,2.04e-30,56;UBERON:0005068,2.04e-30,56;UBERON:0006241,2.04e-30,56;UBERON:0007135,2.04e-30,56;UBERON:0002619,2.97e-28,22;UBERON:0000955,1.10e-26,68;UBERON:0006238,1.10e-26,68;UBERON:0007023,2.57e-26,114;UBERON:0001869,4.07e-26,32;UBERON:0000956,1.02e-24,25;UBERON:0000203,1.02e-24,25;UBERON:0003528,1.84e-24,34;UBERON:0002020,1.84e-24,34;UBERON:0001893,1.87e-24,34;UBERON:0003075,3.29e-24,82;UBERON:0007284,3.29e-24,82;UBERON:0001017,4.30e-24,81;UBERON:0001016,1.65e-23,89;UBERON:0002791,2.12e-22,32;UBERON:0001950,1.77e-21,20;UBERON:0002780,6.96e-20,41;UBERON:0001890,6.96e-20,41;UBERON:0003080,6.96e-20,41;UBERON:0006240,6.96e-20,41;UBERON:0010314,7.62e-20,132;UBERON:0004121,1.71e-19,171;UBERON:0000924,1.71e-19,171;UBERON:0006601,1.71e-19,171;UBERON:0010371,4.22e-18,104;UBERON:0000349,3.12e-16,5;UBERON:0004733,4.67e-15,12;UBERON:0002028,4.67e-15,12;UBERON:0007277,4.67e-15,12;UBERON:0004732,7.48e-14,13;UBERON:0003056,1.59e-12,61;UBERON:0000025,5.44e-12,192;UBERON:0003076,6.34e-12,15;UBERON:0003057,6.34e-12,15;UBERON:0007100,2.30e-11,27;UBERON:0001876,5.00e-11,2;UBERON:0001954,5.83e-11,2;UBERON:0003022,5.83e-11,2;UBERON:0002421,5.83e-11,2;UBERON:0002600,5.83e-11,2;UBERON:0011216,3.83e-10,223;UBERON:0002680,1.26e-09,9;UBERON:0001895,1.26e-09,9;UBERON:0010092,1.26e-09,9;UBERON:0004111,2.14e-09,240;UBERON:0001872,2.28e-09,5;UBERON:0002037,1.03e-08,6;UBERON:0006215,1.03e-08,6;UBERON:0004151,4.20e-08,3;UBERON:0002298,5.48e-08,6;UBERON:0003978,5.73e-08,3;UBERON:0009751,5.73e-08,3;UBERON:0000946,5.73e-08,3;UBERON:0002523,5.73e-08,3;UBERON:0005983,5.73e-08,3;UBERON:0002165,5.73e-08,3;UBERON:0002062,5.73e-08,3;UBERON:0007280,5.73e-08,3;UBERON:0001896,1.48e-07,3;UBERON:0005290,1.48e-07,3;UBERON:0010096,1.48e-07,3;UBERON:0001871,7.48e-07,6;UBERON:0002084,8.81e-07,1;UBERON:0002082,8.81e-07,1;UBERON:0010226,8.81e-07,1 | |||
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| ||
|short_description=p3@SPHKAP | |||
}} | }} |
Latest revision as of 04:38, 25 September 2015
Short description: | p3@SPHKAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPHKAP_5end |
Coexpression cluster: | C1503_cerebellum_heart_small_left_hippocampus_skeletal_occipital |
Association with transcript: | -86bp_to_ENST00000392056, NM_001142644, NM_030623, uc002vpp.2, uc002vpq.2, uc010zlx.1_5end |
EntrezGene: | SPHKAP |
HGNC: | 30619 |
UniProt: | Q2M3C7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.31e-11 | 2 |
neuroectodermal tumor | 2.72e-08 | 10 |