FFCP PHASE1:Hg19::chr2:20425445..20425460,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:20425445..20425460,- to FFCP PHASE1:Hg19::chr2:20425445..20425460,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6382 | |EntrezGene=6382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10658 | |HGNC=10658 | ||
|TSSclassifier=strong | |||
|UniProt=P18827 | |UniProt=P18827 | ||
|association_with_transcript=-251bp_to_ENST00000381150,NM_001006946,uc002rdp.1_5end | |||
|cluster_id=chr2:20425445..20425460,- | |||
|description=CAGE_peak_11_at_SDC1_5end | |||
|id=chr2:20425445..20425460,- | |||
|ontology_enrichment_celltype=CL:0002076!4.28e-20!43;CL:0000223!4.26e-16!59;CL:0002368!2.89e-12!13;CL:0002251!2.44e-11!21;CL:0000066!7.10e-11!254;CL:0002202!5.15e-08!9;CL:0002632!5.15e-08!9;CL:0000622!4.63e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002202;5.98e-26;9!CL:0002632;5.98e-26;9!CL:0002076;1.28e-21;42!CL:0002328;1.18e-20;3!CL:0000307;2.77e-20;3!CL:0002368;8.08e-18;13!CL:0002251;7.97e-15;20!CL:0002159;1.45e-11;14!CL:0000240;1.70e-10;6!CL:0000311;1.70e-10;6!CL:0000079;1.70e-10;6!CL:0000237;1.70e-10;6!CL:0002231;8.70e-10;3!CL:0002621;9.71e-10;3!CL:0002336;1.18e-07;1!CL:0002261;1.18e-07;1!CL:0002252;1.18e-07;1!CL:0002170;1.18e-07;1!CL:0000244;1.31e-07;4!CL:0000731;1.31e-07;4!CL:0000362;3.80e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.00e-31,42;CL:0002202,8.87e-26,9;CL:0002632,8.87e-26,9;CL:0000223,3.78e-22,58;CL:0002328,8.47e-21,3;CL:0000068,6.94e-20,3;CL:0000069,6.94e-20,3;CL:0000307,6.94e-20,3;CL:0000377,6.94e-20,3;CL:0002368,1.06e-17,13;CL:0002251,7.01e-15,20;CL:0002159,1.62e-11,14;CL:0000240,1.93e-10,6;CL:0000311,1.93e-10,6;CL:0000079,1.93e-10,6;CL:0000237,1.93e-10,6;CL:0000036,1.93e-10,6;CL:0000357,1.93e-10,6;CL:0000114,1.93e-10,6;CL:0002231,6.55e-10,3;CL:0002621,7.15e-10,3;CL:0000066,4.50e-09,253;CL:0002321,4.32e-08,250;CL:0002252,1.11e-07,1;CL:0000244,1.49e-07,4;CL:0000731,1.49e-07,4;CL:0002336,1.64e-07,1;CL:0002261,1.64e-07,1;CL:0002170,1.64e-07,1;CL:0000362,3.97e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;2.77e-20;3!CL:0000223;1.64e-12;58!CL:0000357;1.70e-10;6!CL:0000114;1.70e-10;6!UBERON:0006242;2.79e-08;1!UBERON:0009143;1.18e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.31e-08;1!DOID:1357;3.31e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.10e-08,1;DOID:1357,3.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.15e-19!169;UBERON:0000925!7.15e-19!169;UBERON:0006595!7.15e-19!169;UBERON:0001007!3.20e-15!155;UBERON:0001555!3.20e-15!155;UBERON:0007026!3.20e-15!155;UBERON:0004921!1.79e-13!129;UBERON:0004185!1.79e-13!129;UBERON:0000077!9.17e-13!130;UBERON:0000161!2.30e-10!35;UBERON:0001004!3.74e-10!72;UBERON:0005911!7.28e-10!82;UBERON:0000475!4.69e-09!365;UBERON:0005153!7.05e-09!37;UBERON:0001041!1.75e-08!98;UBERON:0003104!2.51e-08!238;UBERON:0009142!2.51e-08!238;UBERON:0005177!3.16e-08!107;UBERON:0000466!3.67e-08!126;UBERON:0005178!1.51e-07!34;UBERON:0002224!1.51e-07!34;UBERON:0002100!1.86e-07!216;UBERON:0000481!2.43e-07!347;UBERON:0005181!3.39e-07!35;UBERON:0000464!4.04e-07!104;UBERON:0000065!5.63e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.18e-20;3!UBERON:0002031;1.18e-20;3!UBERON:0007196;2.24e-15;15!UBERON:0001558;2.24e-15;15!UBERON:0002185;1.29e-12;5!UBERON:0005178;4.11e-11;34!UBERON:0002224;4.11e-11;34!UBERON:0005181;1.83e-10;35!UBERON:0001949;9.71e-10;3!UBERON:0001043;2.21e-09;3!UBERON:0000485;3.79e-09;7!UBERON:0000486;5.06e-09;12!UBERON:0003126;5.41e-09;7!UBERON:0001005;5.41e-09;7!UBERON:0000161;2.78e-08;19!UBERON:0000166;2.78e-08;19!UBERON:0001764;3.31e-08;1!UBERON:0001825;3.31e-08;1!UBERON:0003729;4.04e-08;13!UBERON:0000344;7.41e-08;20!UBERON:0000165;1.00e-07;28!UBERON:0002372;1.18e-07;1!UBERON:0001961;1.18e-07;1!UBERON:0001744;1.18e-07;1!UBERON:0001042;1.18e-07;1!UBERON:0001735;1.18e-07;1!UBERON:0001041;2.11e-07;14!UBERON:0004807;2.36e-07;22!UBERON:0005911;4.18e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,8.47e-21,3;UBERON:0002031,8.47e-21,3;UBERON:0007196,2.83e-15,15;UBERON:0001558,2.83e-15,15;UBERON:0004119,1.40e-13,160;UBERON:0000925,1.40e-13,160;UBERON:0006595,1.40e-13,160;UBERON:0002185,1.06e-12,5;UBERON:0001007,3.58e-12,145;UBERON:0001555,3.58e-12,145;UBERON:0007026,3.58e-12,145;UBERON:0003102,1.17e-11,99;UBERON:0005178,4.36e-11,34;UBERON:0002224,4.36e-11,34;UBERON:0005181,9.75e-11,35;UBERON:0001004,2.04e-10,74;UBERON:0001949,7.15e-10,3;UBERON:0001043,2.30e-09,3;UBERON:0009143,2.30e-09,3;UBERON:0003126,7.94e-09,7;UBERON:0001005,7.94e-09,7;UBERON:0001041,2.06e-08,87;UBERON:0001764,3.10e-08,1;UBERON:0001825,3.10e-08,1;UBERON:0003729,4.37e-08,13;UBERON:0000161,4.99e-08,36;UBERON:0004921,6.52e-08,118;UBERON:0000033,6.72e-08,56;UBERON:0000344,8.00e-08,20;UBERON:0005911,8.30e-08,82;UBERON:0002372,1.26e-07,1;UBERON:0001961,1.26e-07,1;UBERON:0001744,1.26e-07,1;UBERON:0001735,1.26e-07,1;UBERON:0000165,1.95e-07,29;UBERON:0000930,1.95e-07,29;UBERON:0000485,2.95e-07,9;UBERON:0000166,3.82e-07,22;UBERON:0000153,5.32e-07,62;UBERON:0007811,5.32e-07,62;UBERON:0000915,7.42e-07,52 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,1.34465029290355,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,2.75826367343678,2.409647350226,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.392937226493138,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0.161646056818812,0,0,0,1.93260853163297,0.818238361772504,3.15485054927904,0.243947412259191,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,2.41450627898976,0,3.21692711717219,1.11106134190236,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,2.81201501960331,0.16798212819886,0.425325291727159,0.895585227028483,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0.686286847621712,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,1.77561725313127,0.657017248110473,0,0.581051892299796,0,1.80455823272956,4.05156351317944,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,1.14853107599234,0.650060246036521,0,0.386682873168488,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.330569830721956,0.768760269460425,0.510450849978337,0.50578890427775,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,1.05844323998063,2.01090682660736,2.17781969722645,0.188287601553558,2.15252686335615,0,2.21715076768338,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0.358042349351218,0,0.690503839458535,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0,0.17472666824203,0.171986032471617,0,0,0,1.16386819786103,0,0.677942222341597,0,0,0,0.195551382734803,0.0801588202515337,4.4825128895264,0,0.144090417154106,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.0824158583811665,0.26961417541674,0,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0.335434687599266,0.709251365692784,0.262272940674991,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,3.61224421375539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0,0,0,0.800055529326307,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.392590874004102,0,1.10057159113007,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.556157009460346,0.078493092850514,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0.173858272302579,0,0.414432328326074,0.17071847709395,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0.223710863595585,1.47225350422864,0,0,0,0,0,0,0,0,0.33883824611688,0.109940516745429,0,0.0771741581079447,0.437119121007915,0,0.490296643507811,0,0.196308467114945,0,0.4226557275834,0,0.281951753939561,0.0644578879735772,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0.26721740526556,0,0,0.0757786982182394,0.267964130156178,0,0,0.426467963801962,0,0.129177819672012,0.0620747142958579,0,0,0,0.653150243690884,0,1.21233695426258,0.860666464712116,0,0.976839223331694,0,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,1.34465029290355,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,2.75826367343678,2.409647350226,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.392937226493138,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0.161646056818812,0,0,0,1.93260853163297,0.818238361772504,3.15485054927904,0.243947412259191,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,2.41450627898976,0,3.21692711717219,1.11106134190236,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,2.81201501960331,0.16798212819886,0.425325291727159,0.895585227028483,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0.686286847621712,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,1.77561725313127,0.657017248110473,0,0.581051892299796,0,1.80455823272956,4.05156351317944,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,1.14853107599234,0.650060246036521,0,0.386682873168488,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.330569830721956,0.768760269460425,0.510450849978337,0.50578890427775,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,1.05844323998063,2.01090682660736,2.17781969722645,0.188287601553558,2.15252686335615,0,2.21715076768338,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0.358042349351218,0,0.690503839458535,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0,0.17472666824203,0.171986032471617,0,0,0,1.16386819786103,0,0.677942222341597,0,0,0,0.195551382734803,0.0801588202515337,4.4825128895264,0,0.144090417154106,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.0824158583811665,0.26961417541674,0,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0.335434687599266,0.709251365692784,0.262272940674991,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,3.61224421375539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0,0,0,0.800055529326307,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.392590874004102,0,1.10057159113007,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.556157009460346,0.078493092850514,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0.173858272302579,0,0.414432328326074,0.17071847709395,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0.223710863595585,1.47225350422864,0,0,0,0,0,0,0,0,0.33883824611688,0.109940516745429,0,0.0771741581079447,0.437119121007915,0,0.490296643507811,0,0.196308467114945,0,0.4226557275834,0,0.281951753939561,0.0644578879735772,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0.26721740526556,0,0,0.0757786982182394,0.267964130156178,0,0,0.426467963801962,0,0.129177819672012,0.0620747142958579,0,0,0,0.653150243690884,0,1.21233695426258,0.860666464712116,0,0.976839223331694,0,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | ||
|short_description=p11@SDC1 | |||
}} | }} |
Latest revision as of 15:44, 19 September 2015
Short description: | p11@SDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -251bp_to_ENST00000381150, NM_001006946, uc002rdp.1_5end |
EntrezGene: | SDC1 |
HGNC: | 10658 |
UniProt: | P18827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.10e-08 | 1 |
maxillary sinus cancer | 3.10e-08 | 1 |