FFCP PHASE1:Hg19::chr2:136289125..136289134,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:136289125..136289134,+ to FFCP PHASE1:Hg19::chr2:136289125..136289134,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23518 | |EntrezGene=23518 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9757 | |HGNC=9757 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000488035_5end | |||
|cluster_id=chr2:136289125..136289134,+ | |||
|description=CAGE_peak_7_at_R3HDM1_5end | |||
|id=chr2:136289125..136289134,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000817;8.24e-08;1!CL:0002553;8.24e-08;1!CL:0002032;2.27e-07;1!CL:0000557;2.27e-07;1!CL:0002591;2.27e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,8.54e-08,1;CL:0002591,3.40e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.98e-07!51;DOID:0060083!2.98e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003080!4.28e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0003112;2.27e-07;1!UBERON:0001389;2.27e-07;1!UBERON:0000026;2.27e-07;1!UBERON:0008784;2.27e-07;1!UBERON:0006058;2.27e-07;1!UBERON:0003663;2.27e-07;1!UBERON:0004256;2.27e-07;1!UBERON:0011158;2.27e-07;1!UBERON:0004708;2.27e-07;1!UBERON:0002101;2.27e-07;1!UBERON:0004709;2.27e-07;1!UBERON:0002529;2.27e-07;1!UBERON:0010538;2.27e-07;1!UBERON:0003661;2.27e-07;1!UBERON:0010890;2.27e-07;1!UBERON:0002471;2.27e-07;1!UBERON:0001383;2.27e-07;1!UBERON:0010758;2.27e-07;1!UBERON:0010707;2.27e-07;1!UBERON:0007190;2.27e-07;1!UBERON:0000978;2.27e-07;1!UBERON:0002103;2.27e-07;1!UBERON:0001665;2.27e-07;1!UBERON:0003823;2.27e-07;1!UBERON:0003128;2.27e-07;1!UBERON:0000154;2.27e-07;1!UBERON:0010709;2.27e-07;1!UBERON:0001703;2.27e-07;1!UBERON:0002241;2.27e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.83e-07,1;UBERON:0001389,1.83e-07,1;UBERON:0000026,1.83e-07,1;UBERON:0008784,1.83e-07,1;UBERON:0006058,1.83e-07,1;UBERON:0003663,1.83e-07,1;UBERON:0004256,1.83e-07,1;UBERON:0004708,1.83e-07,1;UBERON:0002101,1.83e-07,1;UBERON:0004709,1.83e-07,1;UBERON:0002529,1.83e-07,1;UBERON:0010538,1.83e-07,1;UBERON:0003661,1.83e-07,1;UBERON:0010890,1.83e-07,1;UBERON:0002471,1.83e-07,1;UBERON:0001383,1.83e-07,1;UBERON:0004357,1.83e-07,1;UBERON:0004347,1.83e-07,1;UBERON:0005420,1.83e-07,1;UBERON:0005732,1.83e-07,1;UBERON:0010758,1.83e-07,1;UBERON:0010707,1.83e-07,1;UBERON:0000978,1.83e-07,1;UBERON:0002103,1.83e-07,1;UBERON:0001665,1.83e-07,1;UBERON:0003823,1.83e-07,1;UBERON:0000154,1.83e-07,1;UBERON:0010709,1.83e-07,1;UBERON:0005733,1.83e-07,1;UBERON:0005730,1.83e-07,1;UBERON:0007190,2.21e-07,1;UBERON:0003112,3.20e-07,1;UBERON:0011158,3.20e-07,1;UBERON:0003128,3.20e-07,1;UBERON:0001703,3.20e-07,1;UBERON:0002241,3.20e-07,1;UBERON:0004761,3.20e-07,1;UBERON:0009617,3.20e-07,1 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0,0.382067028739756,0.164201178899891,0.708397031823113,0,0.383829398097213,0.154816123316076,0,0,0,0.542270404062111,0.426507697462265,0.587200878669695,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0.290796477559129,0,0.727752183563449,0.232429036905685,0.411167888021826,0.619412741790207,0,0.256160706529101,0,0,0,2.70852973188684,0,0,0,0.612167784741805,0.962787081228281,0.639337125799041,0.659702600373432,0,0.426224750532694,0,1.70215567407342,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0.212604299965044,0.419317291016752,0.112328631146495,0.150176892841506,0,0,0.39783335439818,0,0,0,0.889509253863555,0.853460445133014,0.400395987036012,0,0,0,0,0,0,0,1.68152568894461,0,0.393419540227666,1.57204305099666,0.411202997999018,0,0,0.473447805734733,0,0.111410456885174,0,0.443067789167242,0,0.128091319725675,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.289648807765598,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.458426764241994,0,0,0,0,0,0.953962497221368,1.14398982156026,0.371457501329565,0.198762407366705,0.860234595106124,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0,0,0,0,0.23486899728753,0,0.421352420106746,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0,0.300476117813194,0.113432183160021,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0,0,0.506328996723799,0.487185025805993,0,0.184099797284599,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0.265059536642971,0,0.414644220061482,0.504641701751257,0,1.56449532329816,0,0,0,0,0.236613600079688,0.842923450390509,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0,0,0,0.283550194484773,0.358234090811393,0,0.766765358330422,0.985326475791887,0,0.414656231081544,0.144119953416961,0.25248486685276,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.358121926479791,0.224170287987055,0.197030760201927,0.215627574859517,0.128343036279748,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0.35142424497814,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.215714200818617,0.426910231213777,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0,0,0.328508624055237,0.519254429183621,0,0.483437798366489,0.200506470303285,0,0.459257792658427,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0,0.192190067365106,0.255225424989168,0.2023155617111,1.39453664789186,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0.511795582622668,0,0.636406495851874,0,0,0,0.235624804691373,0,0,0,0,0.487426979262569,0,0.409499734223957,0.282810863907425,1.13008116620243,0.551365343546124,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0.844430541190656,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0.962479855263359,0.245040215981032,0.371606350251437,2.59684583357601,0.782560276832555,0.637705090915289,0.399158742865633,0.191505370132367,0.211673582723883,0,0.280797178113459,0.456469358066384,0.94007937463814,0,0.338583555603207,0.642352300414798,0.80719882876419,0.425846237690326,0.687010689511529,0,0.447352215784832,1.16794399198336,0.19538809540204,0,0,0.540911356951966,0.66614393599564,1.4098700508785,0,0.146508179271894,0.242721043499027,0.111443384277478,0.568272293612826,0,0,0,0.994147647766298,0.703347082052564,0,0.329607748453519,0.63337622438398,0.398495976502139,0,0,0,0.246169610922139,0,0,0.179021174675609,1.02314474045374,0.394573622547734,0,0,0,0.185536196323703,0,0.260427761085233,0.262379999988587,0.724999575434793,0,0.254253650292766,0,0,0.291604613383254,0.347249989866585,0,0.723578631752448,0,0.442317039724898,0,0.87754158861589,0,0.278847488557207,0.0769502585037971,0.113942055847001,0,0.269272933229316,0,0.31900115973192,0.183195186803725,0,3.06579894587209,0,0,0,0,0,0.18975373272418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| ||
|short_description=p7@R3HDM1 | |||
}} | }} |
Latest revision as of 02:10, 17 September 2015
Short description: | p7@R3HDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_R3HDM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000488035_5end |
EntrezGene: | R3HDM1 |
HGNC: | 9757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 8.54e-08 | 1 |
smooth muscle cell of the pulmonary artery | 3.40e-07 | 1 |