FFCP PHASE1:Hg19::chr2:119988338..119988352,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:119988338..119988352,+ to FFCP PHASE1:Hg19::chr2:119988338..119988352,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:119988338..119988352,+ | |||
|description=CAGE_peak_at_chr2:119988338..119988352,+ | |||
|id=chr2:119988338..119988352,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.47e-50!180;CL:0000680!4.78e-23!57;CL:0000056!4.78e-23!57;CL:0000355!4.78e-23!57;CL:0000187!4.92e-21!54;CL:0000057!1.88e-20!75;CL:0000183!3.33e-20!59;CL:0000393!2.08e-18!60;CL:0000211!2.08e-18!60;CL:0000192!4.43e-17!42;CL:0000514!4.43e-17!42;CL:0000048!7.66e-17!430;CL:0000723!1.17e-16!436;CL:0002371!1.26e-15!591;CL:0000034!1.46e-15!444;CL:0000359!3.08e-15!32;CL:0002620!5.18e-14!23;CL:0000144!6.46e-14!625;CL:0000548!2.40e-09!679;CL:0000004!2.40e-09!679;CL:0000255!2.40e-09!679;CL:0000012!4.56e-09!682;CL:0000222!9.96e-09!119;CL:0002539!1.42e-08!10;CL:0000188!8.71e-08!9;CL:0002334!2.00e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.52e-15;32!CL:0002620;8.28e-13;23!CL:0002539;5.66e-10;10!CL:0002334;1.46e-09;12!CL:0000134;5.08e-09;55!CL:0000192;6.51e-09;43!CL:0002540;1.12e-08;6!CL:0000062;7.01e-08;9!CL:0000723;1.69e-07;61!CL:0000346;1.81e-07;3!CL:1000428;1.81e-07;3!CL:0000048;2.12e-07;58!CL:0000187;2.19e-07;55!CL:0002582;3.58e-07;3!CL:0002603;5.68e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,2.93e-16,433;CL:0000048,5.54e-16,427;CL:0000034,1.40e-15,441;CL:0000359,3.38e-15,32;CL:0000057,1.55e-13,76;CL:0000680,4.28e-13,58;CL:0000056,4.28e-13,58;CL:0000355,4.28e-13,58;CL:0002620,9.14e-13,23;CL:0000187,1.10e-12,55;CL:0000192,2.06e-11,43;CL:0000514,2.06e-11,43;CL:0000393,7.37e-11,61;CL:0000211,7.37e-11,61;CL:0002539,4.56e-10,10;CL:0002334,1.24e-09,12;CL:0000219,1.33e-08,386;CL:0002540,1.60e-08,6;CL:0000346,1.92e-07,3;CL:1000428,1.92e-07,3;CL:0002582,2.28e-07,3;CL:0002320,3.53e-07,361;CL:0000134,4.02e-07,354;CL:0002603,4.79e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;6.51e-09;43!CL:0000355;9.56e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!8.01e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.94e-27!70;UBERON:0000914!8.65e-27!83;UBERON:0002329!8.65e-27!83;UBERON:0003077!8.65e-27!83;UBERON:0003059!8.65e-27!83;UBERON:0007282!8.65e-27!83;UBERON:0009618!8.65e-27!83;UBERON:0007285!8.65e-27!83;UBERON:0000486!1.59e-22!82;UBERON:0001134!1.67e-20!61;UBERON:0002036!1.67e-20!61;UBERON:0003082!1.67e-20!61;UBERON:0002385!2.30e-19!63;UBERON:0001015!2.30e-19!63;UBERON:0000383!2.30e-19!63;UBERON:0005256!1.47e-13!143;UBERON:0001637!4.77e-12!42;UBERON:0003509!4.77e-12!42;UBERON:0004572!4.77e-12!42;UBERON:0002199!2.05e-11!45;UBERON:0002416!2.05e-11!45;UBERON:0004573!1.75e-10!33;UBERON:0004571!1.75e-10!33;UBERON:0002097!2.35e-10!40;UBERON:0000475!5.78e-10!365;UBERON:0002049!9.53e-10!79;UBERON:0007798!9.53e-10!79;UBERON:0002067!7.10e-09!9;UBERON:0004016!7.10e-09!9;UBERON:0010083!7.10e-09!9;UBERON:0004237!1.42e-08!10;UBERON:0004695!1.42e-08!10;UBERON:0002111!1.42e-08!10;UBERON:0004178!1.42e-08!10;UBERON:0001135!3.18e-08!15;UBERON:0002204!1.21e-07!167;UBERON:0000055!4.52e-07!69;UBERON:0003102!8.05e-07!95;UBERON:0002100!8.55e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.11e-10;33!UBERON:0004571;2.11e-10;33!UBERON:0004237;5.66e-10;10!UBERON:0004695;5.66e-10;10!UBERON:0002111;5.66e-10;10!UBERON:0004178;5.66e-10;10!UBERON:0002119;8.57e-09;4!UBERON:0002097;9.57e-09;41!UBERON:0002067;6.08e-08;9!UBERON:0003102;8.21e-08;50!UBERON:0000412;1.81e-07;3!UBERON:0001992;1.81e-07;3!UBERON:0002385;2.06e-07;31!UBERON:0001015;2.06e-07;31!UBERON:0000383;2.06e-07;31!UBERON:0002199;5.53e-07;46!UBERON:0002416;5.53e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,6.13e-17,71;UBERON:0003059,6.13e-17,71;UBERON:0007282,6.13e-17,71;UBERON:0004290,6.13e-17,71;UBERON:0009618,6.13e-17,71;UBERON:0003077,1.37e-16,72;UBERON:0007285,1.37e-16,72;UBERON:0007524,2.99e-16,73;UBERON:0007503,1.09e-14,78;UBERON:0000486,2.52e-13,83;UBERON:0002199,3.15e-13,46;UBERON:0002416,3.15e-13,46;UBERON:0001134,7.55e-12,62;UBERON:0002036,7.55e-12,62;UBERON:0003082,7.55e-12,62;UBERON:0002385,2.75e-11,64;UBERON:0001015,2.75e-11,64;UBERON:0000383,2.75e-11,64;UBERON:0004573,3.84e-11,33;UBERON:0004571,3.84e-11,33;UBERON:0002097,6.75e-11,41;UBERON:0004237,4.56e-10,10;UBERON:0004695,4.56e-10,10;UBERON:0002111,4.56e-10,10;UBERON:0004178,4.56e-10,10;UBERON:0001637,3.01e-09,42;UBERON:0003509,3.01e-09,42;UBERON:0004572,3.01e-09,42;UBERON:0002119,7.96e-09,4;UBERON:0002384,4.27e-08,371;UBERON:0002067,7.39e-08,9;UBERON:0004016,7.39e-08,9;UBERON:0010083,7.39e-08,9;UBERON:0000412,1.92e-07,3;UBERON:0001992,1.92e-07,3;UBERON:0005256,2.22e-07,122 | |||
|phase1_expression=0,0,0.845726424575827,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0,0,0.990130823680373,1.65698687863958,2.6893005858071,4.21886169616784,3.65155045193687,3.90346239032406,2.58554221961255,3.26401105990805,1.56727360739044,0,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.724232594804119,11.9292892057665,8.75942766544745,0.945348171640679,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0,0.529636723252875,0.286836620748814,0.709336764396714,0,0,0.74000264525148,0.311211035399766,0,0,0.302714855289863,0.576175924479999,0.234321431833797,1.24864030732128,1.1409436430889,0.448346041655403,0.822041490506354,0.971237666208789,2.94946694074722,0,1.47401180774122,0.103325781175765,0,0,2.73048408581408,7.18618141816238,0.841680569770331,0.875829639103749,0.554128230968366,0,0,0,0.113432183160021,5.56107870635472,0,0.211931901159562,5.10154863343484,1.23663035086127,6.1833729610951,2.79175284497385,1.85653965465393,0.194874010322397,5.3011092591264,1.19664868234989,0,9.9402685904652,2.51880245569101,0.508681776931463,0,0,0,0,0,0,0,0,0,9.38697193978896,1.28648187638577,5.52539685409922,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,1.71567810298526,0,0,0,0,0,1.03993478527958,0,0.463721619900307,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,1.56983518083505,0.43596006883328,3.0802080044799,0,0,0,0,1.04007436911366,1.28603687131071,1.41849132023278,2.1313774321288,0.285955987316295,0,0,0.325736184293735,0,0,1.50719688529793,0,0.199945982364114,0,0.502257091432126,0,1.4377491329495,0,4.27910715122155,3.18518874668674,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0,0,0,1.50473049863859,0,0,1.32845119707087,1.47495334833363,0.0868836144680828,0.783204629850962,0,0,0,0,0,0,0,1.24053903909388,0.460385919864187,0.280660094433074,1.28139149255701,0,1.28683136914886,0,1.69630663182921,2.13074070375753,2.54594183642808,8.82732529612156,1.85936605535935,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.671624264166535,0,0,0,0,0,0,3.57120912791539,2.88783249722058,0,0,0,0.48335359146061,1.07834031980251,0.460511024178389,0.551346289938122,2.79292636657511,0.870100163485371,1.44885266607372,0.356128142586949,0,0,0,0,0,2.20368642781448,3.485186350803,0.924100740528266,1.59691809095107,0.869932992075073,5.37440235401368,0.143124886741991,0,1.2655176988749,0.762520775695299,0.255897791311334,0.42793898803392,7.00047145437061,2.35484592059769,0.359744915166629,0.54907405947211,0.471249609382746,1.2130948894399,0,2.94880919367287,0,2.19342140668156,1.05650146756755,0.818999468447914,0.989838023675989,3.39024349860728,6.06501877900737,0,0,1.15755106853338,0,0.405820753925408,0.6196469961995,0.845086807596724,0,0,0.35667105148125,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.822251547880505,0,0,0,0,0,0,0,0,0,0,0.372757606696298,0,2.71808412147228,4.18411385249333,0.101998217636322,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57814845749386,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0,0,0.235265819698172,0,3.76794674388145,1.64180283175561,0,1.10961172300523,2.08343305802598,0.754703705257725,7.11848977277229,0,0.756154618816195,2.64243240990727,2.51353754982378,1.11507737014592,4.04822800947244,1.70789252563885,4.97647449409027,0.265841714557995,0,0.601030435988874,2.66563648518157,0.813741466409323,0.545545977607678,1.18151612746737,0,0.398095888698616,1.60011105865261,2.74716564146234,4.04099386519103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4975584472621,0,0,2.42046082444224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.473328002922261,1.02256085710989,0,0,0,0,0,0,0,0,0,0,0,1.63757624423474,0,0,0,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| ||
|short_description=p@chr2:119988338..119988352,+ | |||
}} | }} |
Latest revision as of 23:52, 28 July 2015
Short description: | p@chr2:119988338..119988352, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:119988338..119988352, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 2.93e-16 | 433 |
multi fate stem cell | 5.54e-16 | 427 |
stem cell | 1.40e-15 | 441 |
vascular associated smooth muscle cell | 3.38e-15 | 32 |
fibroblast | 1.55e-13 | 76 |
muscle precursor cell | 4.28e-13 | 58 |
myoblast | 4.28e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.28e-13 | 58 |
skin fibroblast | 9.14e-13 | 23 |
muscle cell | 1.10e-12 | 55 |
smooth muscle cell | 2.06e-11 | 43 |
smooth muscle myoblast | 2.06e-11 | 43 |
electrically responsive cell | 7.37e-11 | 61 |
electrically active cell | 7.37e-11 | 61 |
aortic smooth muscle cell | 4.56e-10 | 10 |
preadipocyte | 1.24e-09 | 12 |
motile cell | 1.33e-08 | 386 |
mesenchymal stem cell of the bone marrow | 1.60e-08 | 6 |
hair follicle dermal papilla cell | 1.92e-07 | 3 |
stem cell of epidermis | 1.92e-07 | 3 |
visceral preadipocyte | 2.28e-07 | 3 |
connective tissue cell | 3.53e-07 | 361 |
mesenchymal cell | 4.02e-07 | 354 |
astrocyte of the cerebellum | 4.79e-07 | 3 |