FFCP PHASE1:Hg19::chr22:37420155..37420170,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4357 | |EntrezGene=4357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7223 | |HGNC=7223 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-62bp_to_uc003aqn.2,uc003aqo.2_5end | |||
|cluster_id=chr22:37420155..37420170,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_8_at_MPST_5end | |||
|id=chr22:37420155..37420170,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.52e-20!12;CL:0000417!3.52e-20!12;CL:0000668!3.52e-20!12;CL:0000414!3.52e-20!12;CL:0000412!3.52e-20!12;CL:0000182!3.52e-20!12;CL:0000223!6.12e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.82e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.90e-09,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!3.58e-14!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!6.29e-26!25;UBERON:0000015!6.29e-26!25;UBERON:0002423!6.29e-26!25;UBERON:0006235!6.29e-26!25;UBERON:0004161!6.29e-26!25;UBERON:0008835!4.06e-24!22;UBERON:0003894!4.06e-24!22;UBERON:0009854!5.21e-23!23;UBERON:0002107!2.14e-22!19;UBERON:0006925!2.14e-22!19;UBERON:0008836!2.14e-22!19;UBERON:0007499!4.65e-21!25;UBERON:0009856!3.39e-20!26;UBERON:0005057!4.52e-16!26;UBERON:0000160!9.77e-15!27;UBERON:0005409!3.83e-14!35;UBERON:0004921!1.07e-13!129;UBERON:0004185!1.07e-13!129;UBERON:0003929!1.88e-13!54;UBERON:0002365!2.68e-13!31;UBERON:0002330!2.68e-13!31;UBERON:0005172!2.80e-13!55;UBERON:0005173!2.80e-13!55;UBERON:0001007!2.90e-12!155;UBERON:0001555!2.90e-12!155;UBERON:0007026!2.90e-12!155;UBERON:0002417!8.79e-12!61;UBERON:0000916!8.79e-12!61;UBERON:0002368!1.19e-11!35;UBERON:0002108!2.64e-11!14;UBERON:0000949!4.55e-11!45;UBERON:0004119!5.98e-11!169;UBERON:0000925!5.98e-11!169;UBERON:0006595!5.98e-11!169;UBERON:0005177!2.03e-08!107;UBERON:0005911!3.32e-08!82;UBERON:0002530!4.09e-08!59;UBERON:0004913!5.82e-08!1;UBERON:0003703!5.82e-08!1;UBERON:0001174!5.82e-08!1;UBERON:0004914!5.82e-08!1;UBERON:0001155!1.28e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.22e-23;17!UBERON:0002108;1.59e-21;4!UBERON:0005409;7.65e-18;22!UBERON:0002107;1.28e-15;19!UBERON:0006925;1.28e-15;19!UBERON:0001155;3.16e-12;9!UBERON:0002423;7.35e-12;25!UBERON:0004921;7.88e-11;33!UBERON:0000059;4.16e-10;11!UBERON:0002365;1.54e-09;31!UBERON:0002330;1.54e-09;31!UBERON:0002368;2.73e-08;33!UBERON:0001007;4.69e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.95e-23,17;UBERON:0002108,1.70e-21,4;UBERON:0005409,9.19e-16,25;UBERON:0002107,1.34e-15,19;UBERON:0006925,1.34e-15,19;UBERON:0008836,1.34e-15,19;UBERON:0008835,1.81e-13,22;UBERON:0003894,1.81e-13,22;UBERON:0009854,7.01e-13,23;UBERON:0001155,2.92e-12,9;UBERON:0007499,7.61e-12,25;UBERON:0009497,7.61e-12,25;UBERON:0000015,7.61e-12,25;UBERON:0002423,7.61e-12,25;UBERON:0006235,7.61e-12,25;UBERON:0004161,7.61e-12,25;UBERON:0009856,2.19e-11,26;UBERON:0004921,1.73e-10,118;UBERON:0000059,3.91e-10,11;UBERON:0002365,1.55e-09,31;UBERON:0002330,1.55e-09,31;UBERON:0002368,1.97e-08,35;UBERON:0001007,2.86e-08,145;UBERON:0001555,2.86e-08,145;UBERON:0007026,2.86e-08,145;UBERON:0005172,1.60e-07,54;UBERON:0005173,1.60e-07,54;UBERON:0004119,2.34e-07,160;UBERON:0000925,2.34e-07,160;UBERON:0006595,2.34e-07,160;UBERON:0002417,9.93e-07,60;UBERON:0000916,9.93e-07,60 | |||
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|short_description=p8@MPST | |||
}} | }} |
Latest revision as of 03:50, 20 September 2015
Short description: | p8@MPST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MPST_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -62bp_to_uc003aqn.2, uc003aqo.2_5end |
EntrezGene: | MPST |
HGNC: | 7223 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.90e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.95e-23 | 17 |
small intestine | 1.70e-21 | 4 |
gastrointestinal system | 9.19e-16 | 25 |
liver | 1.34e-15 | 19 |
digestive gland | 1.34e-15 | 19 |
liver bud | 1.34e-15 | 19 |
hepatic diverticulum | 1.81e-13 | 22 |
liver primordium | 1.81e-13 | 22 |
digestive tract diverticulum | 7.01e-13 | 23 |
colon | 2.92e-12 | 9 |
epithelial sac | 7.61e-12 | 25 |
epithelium of foregut-midgut junction | 7.61e-12 | 25 |
anatomical boundary | 7.61e-12 | 25 |
hepatobiliary system | 7.61e-12 | 25 |
foregut-midgut junction | 7.61e-12 | 25 |
septum transversum | 7.61e-12 | 25 |
sac | 2.19e-11 | 26 |
subdivision of digestive tract | 1.73e-10 | 118 |
large intestine | 3.91e-10 | 11 |
exocrine gland | 1.55e-09 | 31 |
exocrine system | 1.55e-09 | 31 |
endocrine gland | 1.97e-08 | 35 |
digestive system | 2.86e-08 | 145 |
digestive tract | 2.86e-08 | 145 |
primitive gut | 2.86e-08 | 145 |
abdomen element | 1.60e-07 | 54 |
abdominal segment element | 1.60e-07 | 54 |
endoderm-derived structure | 2.34e-07 | 160 |
endoderm | 2.34e-07 | 160 |
presumptive endoderm | 2.34e-07 | 160 |
abdominal segment of trunk | 9.93e-07 | 60 |
abdomen | 9.93e-07 | 60 |