FFCP PHASE1:Hg19::chr21:36041264..36041274,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54102 | |EntrezGene=54102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2065 | |HGNC=2065 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NY7 | |UniProt=Q96NY7 | ||
|association_with_transcript=-413bp_to_ENST00000349499,ENST00000360731,NM_053277,uc002yuf.1,uc010gmt.1_5end | |||
|cluster_id=chr21:36041264..36041274,+ | |||
|coexpression_cluster_id=C789 | |||
|description=CAGE_peak_3_at_CLIC6_5end | |||
|id=chr21:36041264..36041274,+ | |||
|ontology_enrichment_celltype=CL:0002586!5.88e-09!3;CL:0002322!5.59e-07!5;CL:0000149!9.02e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;8.11e-51;3!CL:0000149;2.45e-38;4!CL:0000147;1.84e-11;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,9.60e-51,3;CL:0000149,2.78e-38,4;CL:0000147,1.91e-11,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.50e-07;3 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.18e-22!115;UBERON:0000966!4.53e-09!5;UBERON:0005388!4.53e-09!5;UBERON:0001802!4.53e-09!5;UBERON:0001781!5.88e-09!3;UBERON:0001782!5.88e-09!3;UBERON:0005424!5.88e-09!3;UBERON:0000020!7.20e-09!23;UBERON:0000970!1.53e-08!20;UBERON:0001896!1.67e-08!3;UBERON:0005290!1.67e-08!3;UBERON:0010096!1.67e-08!3;UBERON:0001032!2.09e-08!24;UBERON:0004456!2.09e-08!24;UBERON:0002104!4.80e-08!21;UBERON:0007625!1.35e-07!11;UBERON:0000153!2.86e-07!129;UBERON:0007811!2.86e-07!129;UBERON:0003075!3.31e-07!86;UBERON:0007284!3.31e-07!86;UBERON:0005743!3.76e-07!86;UBERON:0000019!4.22e-07!19;UBERON:0000047!4.22e-07!19;UBERON:0004088!4.22e-07!19;UBERON:0003072!4.22e-07!19;UBERON:0003071!4.22e-07!19;UBERON:0004128!4.22e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;8.05e-54;5!UBERON:0005388;8.05e-54;5!UBERON:0001802;8.05e-54;5!UBERON:0001781;8.11e-51;3!UBERON:0001782;8.11e-51;3!UBERON:0001896;6.80e-23;3!UBERON:0005290;6.80e-23;3!UBERON:0000970;5.58e-21;20!UBERON:0002104;5.47e-20;21!UBERON:0000020;2.91e-18;23!UBERON:0002171;1.33e-17;1!UBERON:0006518;1.33e-17;1!UBERON:0008949;1.33e-17;1!UBERON:0000101;1.33e-17;1!UBERON:0002167;1.33e-17;1!UBERON:0001032;1.66e-17;24!UBERON:0004456;1.66e-17;24!UBERON:0000019;1.67e-14;19!UBERON:0000047;1.67e-14;19!UBERON:0004088;1.67e-14;19!UBERON:0010230;1.67e-14;19!UBERON:0007625;2.05e-14;11!UBERON:0001456;3.73e-13;21!UBERON:0002298;5.84e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,9.60e-51,3;UBERON:0005424,9.60e-51,3;UBERON:0000966,6.65e-45,6;UBERON:0005388,6.65e-45,6;UBERON:0001802,6.65e-45,6;UBERON:0001781,2.78e-38,4;UBERON:0001896,5.15e-23,3;UBERON:0005290,5.15e-23,3;UBERON:0010096,5.15e-23,3;UBERON:0000970,5.80e-20,21;UBERON:0002104,5.80e-20,21;UBERON:0002171,1.44e-17,1;UBERON:0006518,1.44e-17,1;UBERON:0008949,1.44e-17,1;UBERON:0000101,1.44e-17,1;UBERON:0002167,1.44e-17,1;UBERON:0000020,1.75e-17,24;UBERON:0001032,1.75e-17,24;UBERON:0004456,1.75e-17,24;UBERON:0007625,2.15e-14,11;UBERON:0000019,8.81e-14,20;UBERON:0000047,8.81e-14,20;UBERON:0010312,8.81e-14,20;UBERON:0004088,8.81e-14,20;UBERON:0010230,8.81e-14,20;UBERON:0003072,8.81e-14,20;UBERON:0004128,8.81e-14,20;UBERON:0003071,8.81e-14,20;UBERON:0001456,1.47e-12,22;UBERON:0002298,5.08e-12,6;UBERON:0005085,5.36e-09,31;UBERON:0003075,4.74e-07,82;UBERON:0007284,4.74e-07,82 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,1.29707958075265,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,4.35965212697862,14.4326444107871,8.13445986660758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.471807930864739,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,2.03382666702479,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,2.67247318669432,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,4.58727356552057,1.44207766997908,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0.470958557103084,0,0,0,1.07963795609311,0,5.78960007830916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,4.3820183294791,0,0.143339583151451,0,0.135982980381829,0,0.5290268405154,0,0.924351257262837,0,0,0.546327859818478,0,0,0.26721740526556,0,0.250707539292375,0,0,0,0,0.426467963801962,0.476128862927481,0.193766729508018,0.372448285775147,0,0.700118741059814,0.202117188958219,0,0.342233301085281,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0.641136984606466 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,1.29707958075265,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,4.35965212697862,14.4326444107871,8.13445986660758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.471807930864739,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,2.03382666702479,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,2.67247318669432,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,4.58727356552057,1.44207766997908,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0.470958557103084,0,0,0,1.07963795609311,0,5.78960007830916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,4.3820183294791,0,0.143339583151451,0,0.135982980381829,0,0.5290268405154,0,0.924351257262837,0,0,0.546327859818478,0,0,0.26721740526556,0,0.250707539292375,0,0,0,0,0.426467963801962,0.476128862927481,0.193766729508018,0.372448285775147,0,0.700118741059814,0.202117188958219,0,0.342233301085281,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0.641136984606466 | ||
|short_description=p3@CLIC6 | |||
}} | }} |
Latest revision as of 06:10, 18 September 2015
Short description: | p3@CLIC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLIC6_5end |
Coexpression cluster: | C789_retina_Retinal_medulla_stomach_lung_eye_corpus |
Association with transcript: | -413bp_to_ENST00000349499, ENST00000360731, NM_053277, uc002yuf.1, uc010gmt.1_5end |
EntrezGene: | CLIC6 |
HGNC: | 2065 |
UniProt: | Q96NY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 9.60e-51 | 3 |
visual pigment cell | 2.78e-38 | 4 |
pigment cell | 1.91e-11 | 14 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 9.60e-51 | 3 |
presumptive retinal pigmented epithelium | 9.60e-51 | 3 |
retina | 6.65e-45 | 6 |
photoreceptor array | 6.65e-45 | 6 |
posterior segment of eyeball | 6.65e-45 | 6 |
layer of retina | 2.78e-38 | 4 |
medulla oblongata | 5.15e-23 | 3 |
myelencephalon | 5.15e-23 | 3 |
future myelencephalon | 5.15e-23 | 3 |
eye | 5.80e-20 | 21 |
visual system | 5.80e-20 | 21 |
lower lobe of right lung | 1.44e-17 | 1 |
right lung lobe | 1.44e-17 | 1 |
lower lobe of lung | 1.44e-17 | 1 |
lobe of lung | 1.44e-17 | 1 |
right lung | 1.44e-17 | 1 |
sense organ | 1.75e-17 | 24 |
sensory system | 1.75e-17 | 24 |
entire sense organ system | 1.75e-17 | 24 |
pigment epithelium of eye | 2.15e-14 | 11 |
camera-type eye | 8.81e-14 | 20 |
simple eye | 8.81e-14 | 20 |
immature eye | 8.81e-14 | 20 |
ocular region | 8.81e-14 | 20 |
eyeball of camera-type eye | 8.81e-14 | 20 |
optic cup | 8.81e-14 | 20 |
optic vesicle | 8.81e-14 | 20 |
eye primordium | 8.81e-14 | 20 |
face | 1.47e-12 | 22 |
brainstem | 5.08e-12 | 6 |
ectodermal placode | 5.36e-09 | 31 |
neural plate | 4.74e-07 | 82 |
presumptive neural plate | 4.74e-07 | 82 |