FFCP PHASE1:Hg19::chr20:61640711..61640756,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:61640711..61640756,+ to FFCP PHASE1:Hg19::chr20:61640711..61640756,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63930 | |EntrezGene=63930 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000370344,NR_033370,uc002yec.1_5end | |||
|cluster_id=chr20:61640711..61640756,+ | |||
|coexpression_cluster_id=C4059 | |||
|description=CAGE_peak_1_at_LOC63930_5end | |||
|id=chr20:61640711..61640756,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.37e-17!24;CL:0000826!3.37e-17!24;CL:0002322!8.16e-15!5;CL:0000838!5.53e-12!52;CL:0000542!1.11e-11!53;CL:0000051!1.11e-11!53;CL:0000817!1.61e-10!3;CL:0000785!1.02e-07!2;CL:0000955!1.02e-07!2;CL:0000818!1.02e-07!2;CL:0000954!1.02e-07!2;CL:0000816!1.02e-07!2;CL:0000039!7.72e-07!7;CL:0000586!7.72e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.44e-44;24!CL:0000542;5.48e-13;53!CL:0000946;1.18e-12;1!CL:0000786;1.18e-12;1!CL:0000785;3.26e-12;1!CL:0000819;3.26e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.47e-44,24;CL:0000826,1.47e-44,24;CL:0000838,3.08e-24,52;CL:0000542,9.38e-24,53;CL:0000051,9.38e-24,53;CL:0000785,4.89e-23,2;CL:0000955,4.89e-23,2;CL:0000818,4.89e-23,2;CL:0000954,4.89e-23,2;CL:0000816,4.89e-23,2;CL:0000817,1.06e-15,3;CL:0000946,1.25e-12,1;CL:0000786,1.25e-12,1;CL:0000980,1.25e-12,1;CL:0000819,3.45e-12,1;CL:0002087,4.87e-10,115;CL:0000738,5.47e-10,136;CL:0002031,1.47e-09,120;CL:0000037,9.16e-08,168;CL:0000988,2.78e-07,177;CL:0002032,9.66e-07,161;CL:0000837,9.66e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000954;4.37e-23;2!CL:0000051;5.48e-13;53!UBERON:0004872;2.65e-07;7!UBERON:0006965;9.81e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!6.30e-20!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;9.64e-40;10!DOID:630;9.37e-13;1!DOID:0050177;9.37e-13;1!DOID:0050427;9.37e-13;1!DOID:2355;1.75e-12;1!DOID:0060073;3.26e-12;1!DOID:8675;3.26e-12;1!DOID:74;7.20e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,9.64e-40,10;DOID:630,8.85e-13,1;DOID:0050177,8.85e-13,1;DOID:0050427,8.85e-13,1;DOID:2355,1.75e-12,1;DOID:0060073,3.45e-12,1;DOID:8675,3.45e-12,1;DOID:2531,3.98e-10,51;DOID:0060083,3.98e-10,51;DOID:74,7.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001869!9.38e-14!32;UBERON:0002619!4.89e-13!22;UBERON:0001893!8.74e-13!34;UBERON:0007023!1.81e-12!115;UBERON:0001950!9.11e-12!20;UBERON:0002791!2.19e-11!33;UBERON:0000956!2.89e-11!25;UBERON:0000203!2.89e-11!25;UBERON:0004177!4.42e-11!7;UBERON:0002020!5.60e-11!34;UBERON:0003528!5.60e-11!34;UBERON:0002780!3.94e-10!41;UBERON:0001890!3.94e-10!41;UBERON:0006240!3.94e-10!41;UBERON:0000349!4.08e-10!5;UBERON:0003080!7.99e-10!42;UBERON:0002106!1.34e-09!3;UBERON:0004854!1.34e-09!3;UBERON:0009034!1.34e-09!3;UBERON:0002095!1.34e-09!3;UBERON:0004782!1.34e-09!3;UBERON:0003281!1.34e-09!3;UBERON:0009664!1.34e-09!3;UBERON:0002296!1.34e-09!3;UBERON:0005602!1.34e-09!3;UBERON:0001179!1.34e-09!3;UBERON:0006293!1.34e-09!3;UBERON:0001871!4.82e-09!7;UBERON:0001876!1.99e-07!2;UBERON:0003056!6.94e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.30e-23;2!UBERON:0005058;3.30e-23;2!UBERON:0009113;3.30e-23;2!UBERON:0004177;8.07e-21;5!UBERON:0005057;8.07e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.58e-15,7;UBERON:0005057,4.58e-15,7;UBERON:0002370,4.09e-12,4;UBERON:0005058,4.09e-12,4;UBERON:0009113,4.09e-12,4;UBERON:0003295,4.09e-12,4;UBERON:0005562,4.09e-12,4;UBERON:0003351,2.25e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40547463227464,5.91124244039609,5.90330859852594,0,0,0,0,0,0,3.71842562785448,17.6289848284403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.348581828608555,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.7853431578548,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,23.192240931583,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0.276283915531148,0,0,1.72318727645497,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,2.18945747058799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28190655765746,0,1.90684768556206,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,17.5155661084784,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,29.1828175300792,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0.101988829741982,0,0.459474497674225,0,0.0757786982182394,0,0,0,0,0,6.84642444261665,8.81460943001182,0,0,0,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,2.21401172950129,23.401499938136 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40547463227464,5.91124244039609,5.90330859852594,0,0,0,0,0,0,3.71842562785448,17.6289848284403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.348581828608555,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.7853431578548,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,23.192240931583,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0.276283915531148,0,0,1.72318727645497,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,2.18945747058799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28190655765746,0,1.90684768556206,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,17.5155661084784,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,29.1828175300792,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0.101988829741982,0,0.459474497674225,0,0.0757786982182394,0,0,0,0,0,6.84642444261665,8.81460943001182,0,0,0,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,2.21401172950129,23.401499938136 | ||
|short_description=p1@LOC63930 | |||
}} | }} |
Latest revision as of 12:07, 17 September 2015
Short description: | p1@LOC63930 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC63930_5end |
Coexpression cluster: | C4059_Hodgkin_splenic_acute_xeroderma_Burkitt_plasma_thymus |
Association with transcript: | 0bp_to_ENST00000370344, NR_033370, uc002yec.1_5end |
EntrezGene: | LOC63930 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.47e-44 | 24 |
pro-B cell | 1.47e-44 | 24 |
lymphoid lineage restricted progenitor cell | 3.08e-24 | 52 |
lymphocyte | 9.38e-24 | 53 |
common lymphoid progenitor | 9.38e-24 | 53 |
mature B cell | 4.89e-23 | 2 |
pre-B-II cell | 4.89e-23 | 2 |
transitional stage B cell | 4.89e-23 | 2 |
small pre-B-II cell | 4.89e-23 | 2 |
immature B cell | 4.89e-23 | 2 |
precursor B cell | 1.06e-15 | 3 |
antibody secreting cell | 1.25e-12 | 1 |
plasma cell | 1.25e-12 | 1 |
plasmablast | 1.25e-12 | 1 |
B-1 B cell | 3.45e-12 | 1 |
nongranular leukocyte | 4.87e-10 | 115 |
leukocyte | 5.47e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 1.47e-09 | 120 |
hematopoietic stem cell | 9.16e-08 | 168 |
hematopoietic cell | 2.78e-07 | 177 |
hematopoietic oligopotent progenitor cell | 9.66e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.66e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 4.58e-15 | 7 |
immune organ | 4.58e-15 | 7 |
thymus | 4.09e-12 | 4 |
hemolymphoid system gland | 4.09e-12 | 4 |
thymic region | 4.09e-12 | 4 |
pharyngeal gland | 4.09e-12 | 4 |
thymus primordium | 4.09e-12 | 4 |
pharyngeal epithelium | 2.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 9.64e-40 | 10 |
genetic disease | 8.85e-13 | 1 |
monogenic disease | 8.85e-13 | 1 |
xeroderma pigmentosum | 8.85e-13 | 1 |
anemia | 1.75e-12 | 1 |
lymphatic system cancer | 3.45e-12 | 1 |
lymphosarcoma | 3.45e-12 | 1 |
hematologic cancer | 3.98e-10 | 51 |
immune system cancer | 3.98e-10 | 51 |
hematopoietic system disease | 7.20e-07 | 2 |