FFCP PHASE1:Hg19::chr1:66798089..66798106,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:66798089..66798106,+ to FFCP PHASE1:Hg19::chr1:66798089..66798106,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5142 | |EntrezGene=5142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |HGNC=8781 | ||
|TSSclassifier=strong | |||
|UniProt=B4DG71 | |UniProt=B4DG71 | ||
|association_with_transcript=0bp_to_AK294441_5end | |||
|cluster_id=chr1:66798089..66798106,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_PDE4B_5end | |||
|id=chr1:66798089..66798106,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.49e-19!140;CL:0002057!1.21e-18!42;CL:0000860!1.84e-15!45;CL:0002087!6.65e-15!119;CL:0002031!4.09e-12!124;CL:0002139!4.10e-12!24;CL:0000766!4.83e-10!76;CL:0000037!5.71e-10!172;CL:0000566!5.71e-10!172;CL:0000071!8.93e-10!18;CL:0002546!8.93e-10!18;CL:0002009!7.66e-09!65;CL:0000988!1.40e-08!182;CL:0002032!1.78e-08!165;CL:0000837!1.78e-08!165;CL:0002194!3.94e-08!63;CL:0000576!3.94e-08!63;CL:0000040!3.94e-08!63;CL:0000559!3.94e-08!63;CL:0000115!7.39e-08!35;CL:0000557!1.22e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.15e-17;33!CL:0002057;9.15e-17;33!CL:0002139;7.21e-13;24!CL:0000473;5.12e-11;39!CL:0000234;5.12e-11;39!CL:0000071;2.27e-10;18!CL:0000576;2.90e-09;48!CL:0002087;3.61e-07;104!CL:0000115;4.31e-07;36!CL:0000094;5.89e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.60e-23,136;CL:0000860,1.92e-19,42;CL:0002057,1.92e-19,42;CL:0002087,8.31e-18,115;CL:0000473,1.07e-15,48;CL:0000234,1.07e-15,48;CL:0002031,1.53e-14,120;CL:0002139,7.02e-13,24;CL:0000037,3.09e-12,168;CL:0000766,5.68e-12,72;CL:0000988,5.98e-11,177;CL:0002009,6.35e-11,61;CL:0002032,1.98e-10,161;CL:0000837,1.98e-10,161;CL:0000071,2.26e-10,18;CL:0002546,2.26e-10,18;CL:0002194,4.25e-10,59;CL:0000576,4.25e-10,59;CL:0000040,4.25e-10,59;CL:0000559,4.25e-10,59;CL:0000557,3.38e-09,67;CL:0000115,3.29e-08,36;CL:0000839,2.04e-07,66;CL:0000838,3.18e-07,52;CL:0000542,4.45e-07,53;CL:0000051,4.45e-07,53;CL:0000094,5.96e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.67e-14;42!CL:0002546;2.27e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.17e-13!115;UBERON:0001986!8.93e-10!18;UBERON:0004638!8.93e-10!18;UBERON:0004852!8.93e-10!18;UBERON:0002193!1.16e-09!112;UBERON:0001049!2.05e-08!57;UBERON:0005068!2.05e-08!57;UBERON:0006241!2.05e-08!57;UBERON:0007135!2.05e-08!57;UBERON:0002390!3.55e-08!102;UBERON:0003061!3.55e-08!102;UBERON:0002616!1.35e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.27e-10;18!UBERON:0001986;2.27e-10;18!UBERON:0004852;2.27e-10;18!UBERON:0000487;8.83e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.70e-13,114;UBERON:0002193,4.08e-11,108;UBERON:0004638,2.26e-10,18;UBERON:0001986,2.26e-10,18;UBERON:0004852,2.26e-10,18;UBERON:0002390,1.36e-09,98;UBERON:0003061,1.36e-09,98;UBERON:0002405,8.57e-09,93;UBERON:0003081,2.83e-08,203;UBERON:0001049,7.42e-08,56;UBERON:0005068,7.42e-08,56;UBERON:0006241,7.42e-08,56;UBERON:0007135,7.42e-08,56;UBERON:0002371,1.58e-07,76;UBERON:0001474,1.72e-07,82;UBERON:0000073,5.47e-07,53;UBERON:0002616,5.47e-07,53;UBERON:0000487,8.75e-07,22 | |||
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| ||
|short_description=p3@PDE4B | |||
}} | }} |
Latest revision as of 00:26, 19 September 2015
Short description: | p3@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PDE4B_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_AK294441_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | B4DG71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.60e-23 | 136 |
classical monocyte | 1.92e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.92e-19 | 42 |
nongranular leukocyte | 8.31e-18 | 115 |
defensive cell | 1.07e-15 | 48 |
phagocyte | 1.07e-15 | 48 |
hematopoietic lineage restricted progenitor cell | 1.53e-14 | 120 |
endothelial cell of vascular tree | 7.02e-13 | 24 |
hematopoietic stem cell | 3.09e-12 | 168 |
myeloid leukocyte | 5.68e-12 | 72 |
hematopoietic cell | 5.98e-11 | 177 |
macrophage dendritic cell progenitor | 6.35e-11 | 61 |
hematopoietic oligopotent progenitor cell | 1.98e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-10 | 161 |
blood vessel endothelial cell | 2.26e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.26e-10 | 18 |
monopoietic cell | 4.25e-10 | 59 |
monocyte | 4.25e-10 | 59 |
monoblast | 4.25e-10 | 59 |
promonocyte | 4.25e-10 | 59 |
granulocyte monocyte progenitor cell | 3.38e-09 | 67 |
endothelial cell | 3.29e-08 | 36 |
myeloid lineage restricted progenitor cell | 2.04e-07 | 66 |
lymphoid lineage restricted progenitor cell | 3.18e-07 | 52 |
lymphocyte | 4.45e-07 | 53 |
common lymphoid progenitor | 4.45e-07 | 53 |
granulocyte | 5.96e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.70e-13 | 114 |
hemolymphoid system | 4.08e-11 | 108 |
blood vessel endothelium | 2.26e-10 | 18 |
endothelium | 2.26e-10 | 18 |
cardiovascular system endothelium | 2.26e-10 | 18 |
hematopoietic system | 1.36e-09 | 98 |
blood island | 1.36e-09 | 98 |
immune system | 8.57e-09 | 93 |
lateral plate mesoderm | 2.83e-08 | 203 |
neural tube | 7.42e-08 | 56 |
neural rod | 7.42e-08 | 56 |
future spinal cord | 7.42e-08 | 56 |
neural keel | 7.42e-08 | 56 |
bone marrow | 1.58e-07 | 76 |
bone element | 1.72e-07 | 82 |
regional part of nervous system | 5.47e-07 | 53 |
regional part of brain | 5.47e-07 | 53 |
simple squamous epithelium | 8.75e-07 | 22 |